RNA–Protein interactions for RNA: ENST00000493677.5

GPM6B-210, Transcript of glycoprotein M6B, humanhuman

TSL 2 BASIC

Gene GPM6B, Length 1,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-210ENST00000493677 CHIC1Q5VXU3 224 aa23.67■■□□□ 1.38
GPM6B-210ENST00000493677 AEBP2Q6ZN18 517 aaPredicted RBP23.4■■□□□ 1.34
GPM6B-210ENST00000493677 PHF23Q9BUL5 403 aaPredicted RBP20.89■□□□□ 0.93
GPM6B-210ENST00000493677 SENP3Q9H4L4 574 aaPredicted RBP19.77■□□□□ 0.76
GPM6B-210ENST00000493677 PLPPR3Q6T4P5 718 aa19.62■□□□□ 0.73
GPM6B-210ENST00000493677 NISCHQ9Y2I1 1504 aa18.42■□□□□ 0.54
GPM6B-210ENST00000493677 ADRA2BP18089 450 aa18.33■□□□□ 0.53
GPM6B-210ENST00000493677 FOXD1Q16676 465 aa18.22■□□□□ 0.51
GPM6B-210ENST00000493677 PPP6R1Q9UPN7 881 aa18.17■□□□□ 0.5
GPM6B-210ENST00000493677 KCNA4P22459 653 aa17.93■□□□□ 0.46
GPM6B-210ENST00000493677 EHMT2Q96KQ7 1210 aa17.76■□□□□ 0.43
GPM6B-210ENST00000493677 PIAS4Q8N2W9 510 aaPredicted RBP17.44■□□□□ 0.38
GPM6B-210ENST00000493677 PPP4R3CPQ6ZMV5 832 aa17.4■□□□□ 0.38
GPM6B-210ENST00000493677 SLC4A1APQ9BWU0 796 aaKnown RBP17.25■□□□□ 0.35
GPM6B-210ENST00000493677 NCBP3Q53F19 620 aaKnown RBP17.2■□□□□ 0.34
GPM6B-210ENST00000493677 CSRNP3Q8WYN3 585 aa17.08■□□□□ 0.32
GPM6B-210ENST00000493677 NPM3O75607 178 aaKnown RBP16.92■□□□□ 0.3
GPM6B-210ENST00000493677 CNKSR2Q8WXI2 1034 aa16.72■□□□□ 0.27
GPM6B-210ENST00000493677 SCAF1Q9H7N4 1312 aaKnown RBP16.69■□□□□ 0.26
GPM6B-210ENST00000493677 MSH5O43196 834 aa16.51■□□□□ 0.23
GPM6B-210ENST00000493677 ZBTB22O15209 634 aa16.5■□□□□ 0.23
GPM6B-210ENST00000493677 MAPK8IP2Q13387 824 aaPredicted RBP16.29■□□□□ 0.2
GPM6B-210ENST00000493677 FOXD4L1Q9NU39 408 aa16.27■□□□□ 0.2
GPM6B-210ENST00000493677 DNAJC5BQ9UF47 199 aa16.23■□□□□ 0.19
GPM6B-210ENST00000493677 RNF216Q9NWF9 866 aaPredicted RBP16.18■□□□□ 0.18
GPM6B-210ENST00000493677 CCDC180Q9P1Z9 1646 aa16.15■□□□□ 0.18
GPM6B-210ENST00000493677 ABCC9O60706 1549 aa16.11■□□□□ 0.17
GPM6B-210ENST00000493677 DMRT2Q9Y5R5 561 aa15.89■□□□□ 0.13
GPM6B-210ENST00000493677 HOXD11P31277 338 aaPredicted RBP15.87■□□□□ 0.13
GPM6B-210ENST00000493677 POTEDQ86YR6 584 aa15.77■□□□□ 0.12
GPM6B-210ENST00000493677 SLC4A2P04920 1241 aa15.75■□□□□ 0.11
GPM6B-210ENST00000493677 MYCNP04198 464 aaPredicted RBP15.63■□□□□ 0.09
GPM6B-210ENST00000493677 ATXN8OSP0DMR3 200 aa15.6■□□□□ 0.09
GPM6B-210ENST00000493677 AMER1Q5JTC6 1135 aaPredicted RBP15.53■□□□□ 0.08
GPM6B-210ENST00000493677 RTN4Q9NQC3 1192 aaKnown RBP15.5■□□□□ 0.07
GPM6B-210ENST00000493677 FKBP8Q14318 412 aa15.45■□□□□ 0.06
GPM6B-210ENST00000493677 ZCCHC6Q5VYS8 1495 aaKnown RBP15.41■□□□□ 0.06
GPM6B-210ENST00000493677 SLC24A1O60721 1099 aa15.38■□□□□ 0.05
GPM6B-210ENST00000493677 DNAJC5Q9H3Z4 198 aa15.36■□□□□ 0.05
GPM6B-210ENST00000493677 DCAF8L2P0C7V8 631 aa15.33■□□□□ 0.04
GPM6B-210ENST00000493677 DCAF8L1A6NGE4 600 aa15.25■□□□□ 0.03
GPM6B-210ENST00000493677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.2■□□□□ 0.02
GPM6B-210ENST00000493677 DCAF1Q9Y4B6 1507 aa15.2■□□□□ 0.02
GPM6B-210ENST00000493677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.13■□□□□ 0.01
GPM6B-210ENST00000493677 HNRNPUL2Q1KMD3 747 aaKnown RBP15.13■□□□□ 0.01
GPM6B-210ENST00000493677 ATF5Q9Y2D1 282 aaPredicted RBP15.13■□□□□ 0.01
GPM6B-210ENST00000493677 NACADO15069 1562 aa15.11■□□□□ 0.01
GPM6B-210ENST00000493677 SAMD1Q6SPF0 538 aaPredicted RBP15.11■□□□□ 0.01
GPM6B-210ENST00000493677 MYO15BQ96JP2 1530 aa15.1■□□□□ 0.01
GPM6B-210ENST00000493677 RB1CC1Q8TDY2 1594 aa15.04■□□□□ -0
GPM6B-210ENST00000493677 U3KPZ7 1027 aaPredicted RBP15□□□□□ -0.01
GPM6B-210ENST00000493677 SHROOM4Q9ULL8 1493 aa14.87□□□□□ -0.03
GPM6B-210ENST00000493677 SCRIBQ14160 1630 aa14.85□□□□□ -0.03
GPM6B-210ENST00000493677 PABPN1Q86U42 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
GPM6B-210ENST00000493677 ZNF219Q9P2Y4 722 aaPredicted RBP14.82□□□□□ -0.04
GPM6B-210ENST00000493677 UNC13AQ9UPW8 1703 aa14.82□□□□□ -0.04
GPM6B-210ENST00000493677 APLP2Q06481 763 aa14.79□□□□□ -0.04
GPM6B-210ENST00000493677 FBXO3Q9UK99 471 aa14.67□□□□□ -0.06
GPM6B-210ENST00000493677 BICRAQ9NZM4 1560 aa14.67□□□□□ -0.06
GPM6B-210ENST00000493677 SPDYE4A6NLX3 237 aa14.63□□□□□ -0.07
GPM6B-210ENST00000493677 CECR2Q9BXF3 1484 aa14.63□□□□□ -0.07
GPM6B-210ENST00000493677 CC2D2AQ9P2K1 1620 aa14.51□□□□□ -0.09
GPM6B-210ENST00000493677 MKRN4PQ13434 485 aaPredicted RBP14.51□□□□□ -0.09
GPM6B-210ENST00000493677 FBLN2P98095 1184 aa14.49□□□□□ -0.09
GPM6B-210ENST00000493677 PROM2Q8N271 834 aa14.44□□□□□ -0.1
GPM6B-210ENST00000493677 TRHP20396 242 aaPredicted RBP14.43□□□□□ -0.1
GPM6B-210ENST00000493677 VASPP50552 380 aaPredicted RBP14.43□□□□□ -0.1
GPM6B-210ENST00000493677 POLA2Q14181 598 aa14.35□□□□□ -0.11
GPM6B-210ENST00000493677 SPINK5Q9NQ38 1064 aaPredicted RBP14.35□□□□□ -0.11
GPM6B-210ENST00000493677 CUX2O14529 1486 aa14.32□□□□□ -0.12
GPM6B-210ENST00000493677 CAPN15O75808 1086 aa14.3□□□□□ -0.12
GPM6B-210ENST00000493677 PLCB2Q00722 1185 aa14.3□□□□□ -0.12
GPM6B-210ENST00000493677 IFNLR1Q8IU57 520 aaPredicted RBP14.28□□□□□ -0.12
GPM6B-210ENST00000493677 TRIM41Q8WV44 630 aa14.27□□□□□ -0.12
GPM6B-210ENST00000493677 EIF4G1Q04637 1599 aaKnown RBP14.25□□□□□ -0.13
GPM6B-210ENST00000493677 MROH2BQ7Z745 1585 aa14.25□□□□□ -0.13
GPM6B-210ENST00000493677 SMARCA4P51532 1647 aa14.22□□□□□ -0.13
GPM6B-210ENST00000493677 RSF1Q96T23 1441 aaPredicted RBP14.2□□□□□ -0.14
GPM6B-210ENST00000493677 BAZ1AQ9NRL2 1556 aaPredicted RBP14.2□□□□□ -0.14
GPM6B-210ENST00000493677 RNF39Q9H2S5 420 aa14.2□□□□□ -0.14
GPM6B-210ENST00000493677 ZBTB12Q9Y330 459 aaPredicted RBP14.19□□□□□ -0.14
GPM6B-210ENST00000493677 SUPT5HO00267 1087 aaKnown RBP14.17□□□□□ -0.14
GPM6B-210ENST00000493677 HAP1P54257 671 aaPredicted RBP14.15□□□□□ -0.14
GPM6B-210ENST00000493677 WIZO95785 1651 aa14.12□□□□□ -0.15
GPM6B-210ENST00000493677 PKD2Q13563 968 aa14.11□□□□□ -0.15
GPM6B-210ENST00000493677 ABCB7O75027 752 aa14.09□□□□□ -0.15
GPM6B-210ENST00000493677 C1QBPQ07021 282 aaKnown RBP14.09□□□□□ -0.15
GPM6B-210ENST00000493677 ATAD2BQ9ULI0 1458 aa14.06□□□□□ -0.16
GPM6B-210ENST00000493677 KLHL34Q8N239 644 aa14.04□□□□□ -0.16
GPM6B-210ENST00000493677 PEG3Q9GZU2 1588 aa14.04□□□□□ -0.16
GPM6B-210ENST00000493677 ERCC6Q03468 1493 aa14□□□□□ -0.17
GPM6B-210ENST00000493677 SMARCA2P51531 1590 aa14□□□□□ -0.17
GPM6B-210ENST00000493677 SPOCK2Q92563 424 aa13.99□□□□□ -0.17
GPM6B-210ENST00000493677 NCAPD3P42695 1498 aa13.97□□□□□ -0.17
GPM6B-210ENST00000493677 ZNF692Q9BU19 519 aaPredicted RBP13.96□□□□□ -0.18
GPM6B-210ENST00000493677 ECM2O94769 699 aaPredicted RBP13.93□□□□□ -0.18
GPM6B-210ENST00000493677 STAG3Q9UJ98 1225 aa13.93□□□□□ -0.18
GPM6B-210ENST00000493677 TOP2AP11388 1531 aaKnown RBP13.92□□□□□ -0.18
GPM6B-210ENST00000493677 BAZ1BQ9UIG0 1483 aaKnown RBP13.92□□□□□ -0.18
GPM6B-210ENST00000493677 VSIG10Q8N0Z9 540 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms