RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 NISCHQ9Y2I1 1504 aa28.4■■■□□ 2.14
CTTN-209ENST00000525276 ABCC9O60706 1549 aa25.89■■□□□ 1.74
CTTN-209ENST00000525276 CCDC180Q9P1Z9 1646 aa25.59■■□□□ 1.69
CTTN-209ENST00000525276 DNAJC5BQ9UF47 199 aa24.67■■□□□ 1.54
CTTN-209ENST00000525276 RB1CC1Q8TDY2 1594 aa24.47■■□□□ 1.51
CTTN-209ENST00000525276 NACADO15069 1562 aa24.25■■□□□ 1.47
CTTN-209ENST00000525276 PABPN1Q86U42 306 aaKnown RBP eCLIP24.05■■□□□ 1.44
CTTN-209ENST00000525276 UNC13AQ9UPW8 1703 aa24.04■■□□□ 1.44
CTTN-209ENST00000525276 DCAF8L2P0C7V8 631 aa23.94■■□□□ 1.42
CTTN-209ENST00000525276 BICRAQ9NZM4 1560 aa23.91■■□□□ 1.42
CTTN-209ENST00000525276 MYO15BQ96JP2 1530 aa23.85■■□□□ 1.41
CTTN-209ENST00000525276 ZCCHC6Q5VYS8 1495 aaKnown RBP23.49■■□□□ 1.35
CTTN-209ENST00000525276 DCAF1Q9Y4B6 1507 aa23.44■■□□□ 1.34
CTTN-209ENST00000525276 SHROOM4Q9ULL8 1493 aa23.44■■□□□ 1.34
CTTN-209ENST00000525276 CC2D2AQ9P2K1 1620 aa23.41■■□□□ 1.34
CTTN-209ENST00000525276 CECR2Q9BXF3 1484 aa23.35■■□□□ 1.33
CTTN-209ENST00000525276 SCRIBQ14160 1630 aa23.31■■□□□ 1.32
CTTN-209ENST00000525276 EIF4G1Q04637 1599 aaKnown RBP23.28■■□□□ 1.32
CTTN-209ENST00000525276 DNAJC5Q9H3Z4 198 aa22.78■■□□□ 1.24
CTTN-209ENST00000525276 CUX2O14529 1486 aa22.43■■□□□ 1.18
CTTN-209ENST00000525276 NCAPD3P42695 1498 aa22.43■■□□□ 1.18
CTTN-209ENST00000525276 ATAD2BQ9ULI0 1458 aa22.34■■□□□ 1.17
CTTN-209ENST00000525276 ERCC6Q03468 1493 aa22.3■■□□□ 1.16
CTTN-209ENST00000525276 HMGXB3Q12766 1538 aa22.23■■□□□ 1.15
CTTN-209ENST00000525276 SMARCA4P51532 1647 aa22.22■■□□□ 1.15
CTTN-209ENST00000525276 NESP48681 1621 aa22.21■■□□□ 1.15
CTTN-209ENST00000525276 SMARCA2P51531 1590 aa22.19■■□□□ 1.14
CTTN-209ENST00000525276 THOC2Q8NI27 1593 aaKnown RBP22.06■■□□□ 1.12
CTTN-209ENST00000525276 PEG3Q9GZU2 1588 aa22.04■■□□□ 1.12
CTTN-209ENST00000525276 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
CTTN-209ENST00000525276 BAZ1AQ9NRL2 1556 aaPredicted RBP22.02■■□□□ 1.12
CTTN-209ENST00000525276 LAMC3Q9Y6N6 1575 aa21.94■■□□□ 1.1
CTTN-209ENST00000525276 MROH2BQ7Z745 1585 aa21.91■■□□□ 1.1
CTTN-209ENST00000525276 KIF21AQ7Z4S6 1674 aa21.89■■□□□ 1.1
CTTN-209ENST00000525276 PDS5BQ9NTI5 1447 aa21.79■■□□□ 1.08
CTTN-209ENST00000525276 CADPSQ9ULU8 1353 aa21.71■■□□□ 1.07
CTTN-209ENST00000525276 WDR62O43379 1518 aa21.66■■□□□ 1.06
CTTN-209ENST00000525276 MRC2Q9UBG0 1479 aa21.65■■□□□ 1.06
CTTN-209ENST00000525276 WIZO95785 1651 aa21.62■■□□□ 1.05
CTTN-209ENST00000525276 TRIM41Q8WV44 630 aa21.58■■□□□ 1.05
CTTN-209ENST00000525276 CEP164Q9UPV0 1460 aa21.49■■□□□ 1.03
CTTN-209ENST00000525276 FANCD2Q9BXW9 1451 aa21.46■■□□□ 1.03
CTTN-209ENST00000525276 CFTRP13569 1480 aa21.43■■□□□ 1.02
CTTN-209ENST00000525276 URB2Q14146 1524 aaKnown RBP21.36■■□□□ 1.01
CTTN-209ENST00000525276 RSF1Q96T23 1441 aaPredicted RBP21.33■■□□□ 1.01
CTTN-209ENST00000525276 TOP2AP11388 1531 aaKnown RBP21.29■■□□□ 1
CTTN-209ENST00000525276 OSCARQ8IYS5 282 aa21.29■■□□□ 1
CTTN-209ENST00000525276 PRDM2Q13029 1718 aa21.16■□□□□ 0.98
CTTN-209ENST00000525276 ZNF608Q9ULD9 1512 aaPredicted RBP21.15■□□□□ 0.98
CTTN-209ENST00000525276 RIMBP3CA6NJZ7 1639 aa21.15■□□□□ 0.98
CTTN-209ENST00000525276 RIMBP3BA6NNM3 1639 aa21.15■□□□□ 0.98
CTTN-209ENST00000525276 RIMBP3Q9UFD9 1639 aa21.15■□□□□ 0.98
CTTN-209ENST00000525276 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
CTTN-209ENST00000525276 IFT140Q96RY7 1462 aa21.07■□□□□ 0.96
CTTN-209ENST00000525276 ARHGEF11O15085 1522 aa21.04■□□□□ 0.96
CTTN-209ENST00000525276 TOPBP1Q92547 1522 aa21.04■□□□□ 0.96
CTTN-209ENST00000525276 EIF4G3O43432 1585 aaKnown RBP20.98■□□□□ 0.95
CTTN-209ENST00000525276 DNMBPQ6XZF7 1577 aa20.92■□□□□ 0.94
CTTN-209ENST00000525276 TARBP1Q13395 1621 aaKnown RBP20.92■□□□□ 0.94
CTTN-209ENST00000525276 ABCC8Q09428 1581 aa20.89■□□□□ 0.93
CTTN-209ENST00000525276 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.938e-19■■■■□ 23.2
CTTN-209ENST00000525276 CHD1O14646 1710 aa20.88■□□□□ 0.93
CTTN-209ENST00000525276 ARAP1Q96P48 1450 aa20.85■□□□□ 0.93
CTTN-209ENST00000525276 CYB5RLQ6IPT4 315 aa20.83■□□□□ 0.93
CTTN-209ENST00000525276 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
CTTN-209ENST00000525276 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
CTTN-209ENST00000525276 FBLN2P98095 1184 aa20.68■□□□□ 0.9
CTTN-209ENST00000525276 TDRD9Q8NDG6 1382 aaKnown RBP20.68■□□□□ 0.9
CTTN-209ENST00000525276 CLASP1Q7Z460 1538 aa20.68■□□□□ 0.9
CTTN-209ENST00000525276 SNAPC4Q5SXM2 1469 aa20.65■□□□□ 0.9
CTTN-209ENST00000525276 SOGA1O94964 1423 aa20.65■□□□□ 0.9
CTTN-209ENST00000525276 FGD5Q6ZNL6 1462 aa20.62■□□□□ 0.89
CTTN-209ENST00000525276 TRHP20396 242 aaPredicted RBP20.62■□□□□ 0.89
CTTN-209ENST00000525276 CUX1P39880 1505 aa20.61■□□□□ 0.89
CTTN-209ENST00000525276 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
CTTN-209ENST00000525276 SUPT5HO00267 1087 aaKnown RBP20.57■□□□□ 0.88
CTTN-209ENST00000525276 MAGI1Q96QZ7 1491 aaPredicted RBP20.56■□□□□ 0.88
CTTN-209ENST00000525276 SYNJ1O43426 1573 aa20.53■□□□□ 0.88
CTTN-209ENST00000525276 GRIN2BQ13224 1484 aa20.52■□□□□ 0.88
CTTN-209ENST00000525276 SYNJ2O15056 1496 aa20.5■□□□□ 0.87
CTTN-209ENST00000525276 CHMP7Q8WUX9 453 aaPredicted RBP20.49■□□□□ 0.87
CTTN-209ENST00000525276 PBRM1Q86U86 1689 aa20.45■□□□□ 0.86
CTTN-209ENST00000525276 GAPVD1Q14C86 1478 aa20.42■□□□□ 0.86
CTTN-209ENST00000525276 ABCA5Q8WWZ7 1642 aa20.41■□□□□ 0.86
CTTN-209ENST00000525276 ABCA10Q8WWZ4 1543 aa20.38■□□□□ 0.85
CTTN-209ENST00000525276 ERCC6L2Q5T890 1561 aa20.36■□□□□ 0.85
CTTN-209ENST00000525276 GRIN2AQ12879 1464 aa20.28■□□□□ 0.84
CTTN-209ENST00000525276 CEP170Q5SW79 1584 aa20.27■□□□□ 0.84
CTTN-209ENST00000525276 NUP160Q12769 1436 aa20.27■□□□□ 0.83
CTTN-209ENST00000525276 ADAMTS12P58397 1594 aa20.26■□□□□ 0.83
CTTN-209ENST00000525276 SHROOM2Q13796 1616 aa20.22■□□□□ 0.83
CTTN-209ENST00000525276 AEBP2Q6ZN18 517 aaPredicted RBP20.19■□□□□ 0.82
CTTN-209ENST00000525276 WRNQ14191 1432 aaPredicted RBP eCLIP20.18■□□□□ 0.82
CTTN-209ENST00000525276 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
CTTN-209ENST00000525276 TOP2BQ02880 1626 aa20.15■□□□□ 0.82
CTTN-209ENST00000525276 FHAD1B1AJZ9 1412 aa20.13■□□□□ 0.81
CTTN-209ENST00000525276 KIF13AQ9H1H9 1805 aa20.12■□□□□ 0.81
CTTN-209ENST00000525276 ERICH3Q5RHP9 1530 aa20.1■□□□□ 0.81
CTTN-209ENST00000525276 PRG4Q92954 1404 aaPredicted RBP20.03■□□□□ 0.8
CTTN-209ENST00000525276 RUSC2Q8N2Y8 1516 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms