RNA–Protein interactions for RNA: ENST00000488268.5

ECHDC2-216, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 631 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-216ENST00000488268 NISCHQ9Y2I1 1504 aa26.75■■□□□ 1.87
ECHDC2-216ENST00000488268 ABCC9O60706 1549 aa24.94■■□□□ 1.58
ECHDC2-216ENST00000488268 CCDC180Q9P1Z9 1646 aa24.39■■□□□ 1.49
ECHDC2-216ENST00000488268 DNAJC5BQ9UF47 199 aa24.07■■□□□ 1.44
ECHDC2-216ENST00000488268 RB1CC1Q8TDY2 1594 aa23.48■■□□□ 1.35
ECHDC2-216ENST00000488268 NACADO15069 1562 aa23.16■■□□□ 1.3
ECHDC2-216ENST00000488268 UNC13AQ9UPW8 1703 aa23.11■■□□□ 1.29
ECHDC2-216ENST00000488268 PABPN1Q86U42 306 aaKnown RBP eCLIP23.06■■□□□ 1.282e-7■□□□□ 10.8
ECHDC2-216ENST00000488268 BICRAQ9NZM4 1560 aa22.9■■□□□ 1.26
ECHDC2-216ENST00000488268 DCAF8L2P0C7V8 631 aa22.7■■□□□ 1.22
ECHDC2-216ENST00000488268 MYO15BQ96JP2 1530 aa22.64■■□□□ 1.21
ECHDC2-216ENST00000488268 DNAJC5Q9H3Z4 198 aa22.6■■□□□ 1.21
ECHDC2-216ENST00000488268 CC2D2AQ9P2K1 1620 aa22.57■■□□□ 1.2
ECHDC2-216ENST00000488268 CECR2Q9BXF3 1484 aa22.54■■□□□ 1.2
ECHDC2-216ENST00000488268 SHROOM4Q9ULL8 1493 aa22.46■■□□□ 1.19
ECHDC2-216ENST00000488268 EIF4G1Q04637 1599 aaKnown RBP22.33■■□□□ 1.17
ECHDC2-216ENST00000488268 DCAF1Q9Y4B6 1507 aa22.09■■□□□ 1.13
ECHDC2-216ENST00000488268 SCRIBQ14160 1630 aa22.08■■□□□ 1.13
ECHDC2-216ENST00000488268 ZCCHC6Q5VYS8 1495 aaKnown RBP22.03■■□□□ 1.12
ECHDC2-216ENST00000488268 CUX2O14529 1486 aa21.82■■□□□ 1.08
ECHDC2-216ENST00000488268 ERCC6Q03468 1493 aa21.53■■□□□ 1.04
ECHDC2-216ENST00000488268 NCAPD3P42695 1498 aa21.39■■□□□ 1.01
ECHDC2-216ENST00000488268 NESP48681 1621 aa21.26■□□□□ 0.99
ECHDC2-216ENST00000488268 THOC2Q8NI27 1593 aaKnown RBP21.25■□□□□ 0.99
ECHDC2-216ENST00000488268 ATAD2BQ9ULI0 1458 aa21.2■□□□□ 0.98
ECHDC2-216ENST00000488268 TRIM41Q8WV44 630 aa21.2■□□□□ 0.98
ECHDC2-216ENST00000488268 HMGXB3Q12766 1538 aa21.18■□□□□ 0.98
ECHDC2-216ENST00000488268 SMARCA2P51531 1590 aa21.1■□□□□ 0.97
ECHDC2-216ENST00000488268 SMARCA4P51532 1647 aa21.04■□□□□ 0.96
ECHDC2-216ENST00000488268 KIF21AQ7Z4S6 1674 aa21.04■□□□□ 0.96
ECHDC2-216ENST00000488268 LAMC3Q9Y6N6 1575 aa21.02■□□□□ 0.96
ECHDC2-216ENST00000488268 BAZ1BQ9UIG0 1483 aaKnown RBP20.92■□□□□ 0.94
ECHDC2-216ENST00000488268 PEG3Q9GZU2 1588 aa20.88■□□□□ 0.93
ECHDC2-216ENST00000488268 PDS5BQ9NTI5 1447 aa20.86■□□□□ 0.93
ECHDC2-216ENST00000488268 BAZ1AQ9NRL2 1556 aaPredicted RBP20.8■□□□□ 0.92
ECHDC2-216ENST00000488268 WDR62O43379 1518 aa20.76■□□□□ 0.91
ECHDC2-216ENST00000488268 MRC2Q9UBG0 1479 aa20.74■□□□□ 0.91
ECHDC2-216ENST00000488268 CADPSQ9ULU8 1353 aa20.66■□□□□ 0.9
ECHDC2-216ENST00000488268 OSCARQ8IYS5 282 aa20.64■□□□□ 0.89
ECHDC2-216ENST00000488268 MROH2BQ7Z745 1585 aa20.6■□□□□ 0.89
ECHDC2-216ENST00000488268 RIMBP3CA6NJZ7 1639 aa20.56■□□□□ 0.88
ECHDC2-216ENST00000488268 RIMBP3BA6NNM3 1639 aa20.56■□□□□ 0.88
ECHDC2-216ENST00000488268 RIMBP3Q9UFD9 1639 aa20.56■□□□□ 0.88
ECHDC2-216ENST00000488268 CEP164Q9UPV0 1460 aa20.5■□□□□ 0.87
ECHDC2-216ENST00000488268 FANCD2Q9BXW9 1451 aa20.43■□□□□ 0.86
ECHDC2-216ENST00000488268 ARHGEF11O15085 1522 aa20.37■□□□□ 0.85
ECHDC2-216ENST00000488268 WIZO95785 1651 aa20.35■□□□□ 0.85
ECHDC2-216ENST00000488268 URB2Q14146 1524 aaKnown RBP20.34■□□□□ 0.85
ECHDC2-216ENST00000488268 CFTRP13569 1480 aa20.31■□□□□ 0.84
ECHDC2-216ENST00000488268 ZNF608Q9ULD9 1512 aaPredicted RBP20.19■□□□□ 0.82
ECHDC2-216ENST00000488268 CYB5RLQ6IPT4 315 aa20.19■□□□□ 0.82
ECHDC2-216ENST00000488268 PRDM2Q13029 1718 aa20.18■□□□□ 0.82
ECHDC2-216ENST00000488268 TRHP20396 242 aaPredicted RBP20.14■□□□□ 0.81
ECHDC2-216ENST00000488268 ARAP1Q96P48 1450 aa20.13■□□□□ 0.81
ECHDC2-216ENST00000488268 IFT140Q96RY7 1462 aa20.13■□□□□ 0.81
ECHDC2-216ENST00000488268 CHD1O14646 1710 aa20.1■□□□□ 0.81
ECHDC2-216ENST00000488268 EIF4G3O43432 1585 aaKnown RBP20.07■□□□□ 0.8
ECHDC2-216ENST00000488268 AEBP2Q6ZN18 517 aaPredicted RBP20.05■□□□□ 0.8
ECHDC2-216ENST00000488268 TOP2AP11388 1531 aaKnown RBP20.01■□□□□ 0.79
ECHDC2-216ENST00000488268 RSF1Q96T23 1441 aaPredicted RBP20.01■□□□□ 0.79
ECHDC2-216ENST00000488268 TOPBP1Q92547 1522 aa19.99■□□□□ 0.79
ECHDC2-216ENST00000488268 TARBP1Q13395 1621 aaKnown RBP19.93■□□□□ 0.78
ECHDC2-216ENST00000488268 AQRO60306 1485 aaKnown RBP eCLIP19.89■□□□□ 0.773e-6■■□□□ 13.8
ECHDC2-216ENST00000488268 ABCC8Q09428 1581 aa19.88■□□□□ 0.77
ECHDC2-216ENST00000488268 DNMBPQ6XZF7 1577 aa19.86■□□□□ 0.77
ECHDC2-216ENST00000488268 CLASP1Q7Z460 1538 aa19.83■□□□□ 0.77
ECHDC2-216ENST00000488268 FBLN2P98095 1184 aa19.8■□□□□ 0.76
ECHDC2-216ENST00000488268 CCDC88BA6NC98 1476 aa19.78■□□□□ 0.76
ECHDC2-216ENST00000488268 POLA1P09884 1462 aaPredicted RBP19.73■□□□□ 0.75
ECHDC2-216ENST00000488268 SYNJ1O43426 1573 aa19.7■□□□□ 0.74
ECHDC2-216ENST00000488268 SNAPC4Q5SXM2 1469 aa19.67■□□□□ 0.74
ECHDC2-216ENST00000488268 RAD54L2Q9Y4B4 1467 aa19.66■□□□□ 0.74
ECHDC2-216ENST00000488268 WDR97A6NE52 1622 aa19.65■□□□□ 0.74
ECHDC2-216ENST00000488268 TDRD9Q8NDG6 1382 aaKnown RBP19.64■□□□□ 0.73
ECHDC2-216ENST00000488268 MAGI1Q96QZ7 1491 aaPredicted RBP19.6■□□□□ 0.73
ECHDC2-216ENST00000488268 GAPVD1Q14C86 1478 aa19.6■□□□□ 0.73
ECHDC2-216ENST00000488268 SOGA1O94964 1423 aa19.59■□□□□ 0.73
ECHDC2-216ENST00000488268 CHMP7Q8WUX9 453 aaPredicted RBP19.57■□□□□ 0.72
ECHDC2-216ENST00000488268 SYNJ2O15056 1496 aa19.54■□□□□ 0.72
ECHDC2-216ENST00000488268 KIF13AQ9H1H9 1805 aa19.51■□□□□ 0.71
ECHDC2-216ENST00000488268 GRIN2BQ13224 1484 aa19.51■□□□□ 0.71
ECHDC2-216ENST00000488268 FGD5Q6ZNL6 1462 aa19.49■□□□□ 0.71
ECHDC2-216ENST00000488268 PBRM1Q86U86 1689 aa19.49■□□□□ 0.71
ECHDC2-216ENST00000488268 ERCC6L2Q5T890 1561 aa19.46■□□□□ 0.71
ECHDC2-216ENST00000488268 CUX1P39880 1505 aa19.4■□□□□ 0.7
ECHDC2-216ENST00000488268 ILDR1Q86SU0 546 aaPredicted RBP19.36■□□□□ 0.69
ECHDC2-216ENST00000488268 CEP170Q5SW79 1584 aa19.35■□□□□ 0.69
ECHDC2-216ENST00000488268 SUPT5HO00267 1087 aaKnown RBP19.34■□□□□ 0.69
ECHDC2-216ENST00000488268 ABCA5Q8WWZ7 1642 aa19.33■□□□□ 0.69
ECHDC2-216ENST00000488268 SHROOM2Q13796 1616 aa19.33■□□□□ 0.68
ECHDC2-216ENST00000488268 GRIN2AQ12879 1464 aa19.28■□□□□ 0.68
ECHDC2-216ENST00000488268 NUP160Q12769 1436 aa19.26■□□□□ 0.67
ECHDC2-216ENST00000488268 KDM4FA0A1W2PPD8 638 aa19.26■□□□□ 0.67
ECHDC2-216ENST00000488268 ABCA10Q8WWZ4 1543 aa19.25■□□□□ 0.67
ECHDC2-216ENST00000488268 ADAMTS12P58397 1594 aa19.21■□□□□ 0.67
ECHDC2-216ENST00000488268 ABCC10Q5T3U5 1492 aa19.19■□□□□ 0.66
ECHDC2-216ENST00000488268 DIP2BQ9P265 1576 aa19.15■□□□□ 0.66
ECHDC2-216ENST00000488268 KDM6BO15054 1643 aa19.14■□□□□ 0.66
ECHDC2-216ENST00000488268 FAM69CQ0P6D2 419 aa19.13■□□□□ 0.65
ECHDC2-216ENST00000488268 MAPKBP1O60336 1514 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms