Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.7■■□□□ 1.22
EXD3Q8N9H8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
EXD3Q8N9H8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.7■■□□□ 1.22
EXD3Q8N9H8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
EXD3Q8N9H8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.7■■□□□ 1.22
EXD3Q8N9H8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
EXD3Q8N9H8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.69■■□□□ 1.22
EXD3Q8N9H8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
EXD3Q8N9H8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
EXD3Q8N9H8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
EXD3Q8N9H8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
EXD3Q8N9H8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
EXD3Q8N9H8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
EXD3Q8N9H8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
EXD3Q8N9H8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.68■■□□□ 1.22
EXD3Q8N9H8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
EXD3Q8N9H8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
EXD3Q8N9H8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
EXD3Q8N9H8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
EXD3Q8N9H8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.67■■□□□ 1.22
EXD3Q8N9H8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
EXD3Q8N9H8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.67■■□□□ 1.22
EXD3Q8N9H8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
EXD3Q8N9H8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
EXD3Q8N9H8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
EXD3Q8N9H8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
EXD3Q8N9H8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
EXD3Q8N9H8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.66■■□□□ 1.22
EXD3Q8N9H8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
EXD3Q8N9H8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
EXD3Q8N9H8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
EXD3Q8N9H8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
EXD3Q8N9H8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
EXD3Q8N9H8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
EXD3Q8N9H8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
EXD3Q8N9H8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
EXD3Q8N9H8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
EXD3Q8N9H8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
EXD3Q8N9H8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
EXD3Q8N9H8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.64■■□□□ 1.21
EXD3Q8N9H8 AC087393.1-201ENST00000582896 145 ntBASIC22.64■■□□□ 1.21
EXD3Q8N9H8 MIR4787-201ENST00000607364 84 ntBASIC22.64■■□□□ 1.21
EXD3Q8N9H8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.64■■□□□ 1.21
EXD3Q8N9H8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
EXD3Q8N9H8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
EXD3Q8N9H8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
EXD3Q8N9H8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
EXD3Q8N9H8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.63■■□□□ 1.21
EXD3Q8N9H8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
EXD3Q8N9H8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
EXD3Q8N9H8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.63■■□□□ 1.21
EXD3Q8N9H8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
EXD3Q8N9H8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.63■■□□□ 1.21
EXD3Q8N9H8 UNC93B8-201ENST00000511903 705 ntBASIC22.63■■□□□ 1.21
EXD3Q8N9H8 KRT125P-201ENST00000546827 989 ntBASIC22.63■■□□□ 1.21
EXD3Q8N9H8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.63■■□□□ 1.21
EXD3Q8N9H8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
EXD3Q8N9H8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
EXD3Q8N9H8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
EXD3Q8N9H8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
EXD3Q8N9H8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
EXD3Q8N9H8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.62■■□□□ 1.21
EXD3Q8N9H8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
EXD3Q8N9H8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.62■■□□□ 1.21
EXD3Q8N9H8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
EXD3Q8N9H8 LONRF2P2-201ENST00000439212 571 ntBASIC22.61■■□□□ 1.21
EXD3Q8N9H8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
EXD3Q8N9H8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.61■■□□□ 1.21
EXD3Q8N9H8 AL139246.5-201ENST00000606645 996 ntBASIC22.61■■□□□ 1.21
EXD3Q8N9H8 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.61■■□□□ 1.21
EXD3Q8N9H8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
EXD3Q8N9H8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.61■■□□□ 1.21
EXD3Q8N9H8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
EXD3Q8N9H8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
EXD3Q8N9H8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
EXD3Q8N9H8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
EXD3Q8N9H8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.6■■□□□ 1.21
EXD3Q8N9H8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.6■■□□□ 1.21
EXD3Q8N9H8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
EXD3Q8N9H8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
EXD3Q8N9H8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
EXD3Q8N9H8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.59■■□□□ 1.21
EXD3Q8N9H8 AL359504.2-201ENST00000605506 1601 ntBASIC22.59■■□□□ 1.21
EXD3Q8N9H8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
EXD3Q8N9H8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
EXD3Q8N9H8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
EXD3Q8N9H8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
EXD3Q8N9H8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
EXD3Q8N9H8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.57■■□□□ 1.2
EXD3Q8N9H8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.57■■□□□ 1.2
EXD3Q8N9H8 KRT16P3-201ENST00000439127 1283 ntBASIC22.57■■□□□ 1.2
EXD3Q8N9H8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.57■■□□□ 1.2
EXD3Q8N9H8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
EXD3Q8N9H8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
EXD3Q8N9H8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
EXD3Q8N9H8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
EXD3Q8N9H8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
EXD3Q8N9H8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.57■■□□□ 1.2
EXD3Q8N9H8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
EXD3Q8N9H8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms