RNA–Protein interactions for RNA: ENST00000458465.6

SUMF1-205, Transcript of sulfatase modifying factor 1, humanhuman

TSL 2 BASIC

Gene SUMF1, Length 1,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1-205ENST00000458465 NISCHQ9Y2I1 1504 aa57.24■■■■■ 6.75
SUMF1-205ENST00000458465 CCDC180Q9P1Z9 1646 aa51.35■■■■■ 5.81
SUMF1-205ENST00000458465 ABCC9O60706 1549 aa50.92■■■■■ 5.74
SUMF1-205ENST00000458465 RB1CC1Q8TDY2 1594 aa48.7■■■■■ 5.39
SUMF1-205ENST00000458465 NACADO15069 1562 aa48.46■■■■■ 5.35
SUMF1-205ENST00000458465 MYO15BQ96JP2 1530 aa47.96■■■■■ 5.27
SUMF1-205ENST00000458465 DCAF8L2P0C7V8 631 aa47.93■■■■■ 5.26
SUMF1-205ENST00000458465 ZCCHC6Q5VYS8 1495 aaKnown RBP47.53■■■■■ 5.2
SUMF1-205ENST00000458465 UNC13AQ9UPW8 1703 aa47.53■■■■■ 5.2
SUMF1-205ENST00000458465 DNAJC5BQ9UF47 199 aa47.49■■■■■ 5.19
SUMF1-205ENST00000458465 DCAF1Q9Y4B6 1507 aa47.4■■■■■ 5.18
SUMF1-205ENST00000458465 PABPN1Q86U42 306 aaKnown RBP eCLIP47.36■■■■■ 5.17
SUMF1-205ENST00000458465 BICRAQ9NZM4 1560 aa47.25■■■■■ 5.15
SUMF1-205ENST00000458465 SHROOM4Q9ULL8 1493 aa46.82■■■■■ 5.09
SUMF1-205ENST00000458465 SCRIBQ14160 1630 aa46.65■■■■■ 5.06
SUMF1-205ENST00000458465 EIF4G1Q04637 1599 aaKnown RBP46.08■■■■■ 4.97
SUMF1-205ENST00000458465 CC2D2AQ9P2K1 1620 aa46.07■■■■■ 4.97
SUMF1-205ENST00000458465 CECR2Q9BXF3 1484 aa45.9■■■■■ 4.94
SUMF1-205ENST00000458465 NCAPD3P42695 1498 aa44.72■■■■■ 4.75
SUMF1-205ENST00000458465 SMARCA4P51532 1647 aa44.61■■■■■ 4.73
SUMF1-205ENST00000458465 ATAD2BQ9ULI0 1458 aa44.58■■■■■ 4.73
SUMF1-205ENST00000458465 SMARCA2P51531 1590 aa44.52■■■■■ 4.72
SUMF1-205ENST00000458465 HMGXB3Q12766 1538 aa44.45■■■■■ 4.71
SUMF1-205ENST00000458465 BAZ1AQ9NRL2 1556 aaPredicted RBP44.44■■■■■ 4.71
SUMF1-205ENST00000458465 PEG3Q9GZU2 1588 aa44.26■■■■■ 4.68
SUMF1-205ENST00000458465 BAZ1BQ9UIG0 1483 aaKnown RBP44.15■■■■■ 4.66
SUMF1-205ENST00000458465 MROH2BQ7Z745 1585 aa44.06■■■■■ 4.64
SUMF1-205ENST00000458465 ERCC6Q03468 1493 aa43.99■■■■■ 4.63
SUMF1-205ENST00000458465 CUX2O14529 1486 aa43.93■■■■■ 4.62
SUMF1-205ENST00000458465 NESP48681 1621 aa43.81■■■■■ 4.6
SUMF1-205ENST00000458465 LAMC3Q9Y6N6 1575 aa43.67■■■■■ 4.58
SUMF1-205ENST00000458465 DNAJC5Q9H3Z4 198 aa43.51■■■■■ 4.56
SUMF1-205ENST00000458465 WIZO95785 1651 aa43.51■■■■■ 4.56
SUMF1-205ENST00000458465 THOC2Q8NI27 1593 aaKnown RBP43.44■■■■■ 4.54
SUMF1-205ENST00000458465 PDS5BQ9NTI5 1447 aa43.38■■■■■ 4.53
SUMF1-205ENST00000458465 CADPSQ9ULU8 1353 aa43.31■■■■■ 4.52
SUMF1-205ENST00000458465 KIF21AQ7Z4S6 1674 aa43.3■■■■■ 4.52
SUMF1-205ENST00000458465 RSF1Q96T23 1441 aaPredicted RBP43.25■■■■■ 4.51
SUMF1-205ENST00000458465 TOP2AP11388 1531 aaKnown RBP43.08■■■■■ 4.49
SUMF1-205ENST00000458465 MRC2Q9UBG0 1479 aa43■■■■■ 4.47
SUMF1-205ENST00000458465 WDR62O43379 1518 aa42.92■■■■■ 4.46
SUMF1-205ENST00000458465 CFTRP13569 1480 aa42.92■■■■■ 4.46
SUMF1-205ENST00000458465 CEP164Q9UPV0 1460 aa42.87■■■■■ 4.45
SUMF1-205ENST00000458465 FANCD2Q9BXW9 1451 aa42.82■■■■■ 4.45
SUMF1-205ENST00000458465 PRDM2Q13029 1718 aa42.52■■■■■ 4.4
SUMF1-205ENST00000458465 CCDC88BA6NC98 1476 aa42.51■■■■■ 4.4
SUMF1-205ENST00000458465 URB2Q14146 1524 aaKnown RBP42.46■■■■■ 4.39
SUMF1-205ENST00000458465 TOPBP1Q92547 1522 aa42.05■■■■■ 4.32
SUMF1-205ENST00000458465 ABCC8Q09428 1581 aa42.03■■■■■ 4.32
SUMF1-205ENST00000458465 IFT140Q96RY7 1462 aa42.02■■■■■ 4.32
SUMF1-205ENST00000458465 DNMBPQ6XZF7 1577 aa41.95■■■■■ 4.31
SUMF1-205ENST00000458465 ZNF608Q9ULD9 1512 aaPredicted RBP41.85■■■■■ 4.29
SUMF1-205ENST00000458465 OSCARQ8IYS5 282 aa41.83■■■■■ 4.29
SUMF1-205ENST00000458465 EIF4G3O43432 1585 aaKnown RBP41.7■■■■■ 4.27
SUMF1-205ENST00000458465 TARBP1Q13395 1621 aaKnown RBP41.68■■■■■ 4.26
SUMF1-205ENST00000458465 POLA1P09884 1462 aaPredicted RBP41.65■■■■■ 4.26
SUMF1-205ENST00000458465 TRIM41Q8WV44 630 aa41.57■■■■■ 4.25
SUMF1-205ENST00000458465 AQRO60306 1485 aaKnown RBP eCLIP41.47■■■■■ 4.23
SUMF1-205ENST00000458465 CUX1P39880 1505 aa41.4■■■■■ 4.22
SUMF1-205ENST00000458465 SOGA1O94964 1423 aa41.4■■■■■ 4.22
SUMF1-205ENST00000458465 RAD54L2Q9Y4B4 1467 aa41.4■■■■■ 4.22
SUMF1-205ENST00000458465 FGD5Q6ZNL6 1462 aa41.39■■■■■ 4.22
SUMF1-205ENST00000458465 WDR97A6NE52 1622 aa41.38■■■■■ 4.21
SUMF1-205ENST00000458465 SUPT5HO00267 1087 aaKnown RBP41.32■■■■■ 4.21
SUMF1-205ENST00000458465 RIMBP3CA6NJZ7 1639 aa41.31■■■■■ 4.2
SUMF1-205ENST00000458465 RIMBP3BA6NNM3 1639 aa41.31■■■■■ 4.2
SUMF1-205ENST00000458465 RIMBP3Q9UFD9 1639 aa41.31■■■■■ 4.2
SUMF1-205ENST00000458465 CHD1O14646 1710 aa41.3■■■■■ 4.2
SUMF1-205ENST00000458465 TDRD9Q8NDG6 1382 aaKnown RBP41.25■■■■■ 4.19
SUMF1-205ENST00000458465 ARHGEF11O15085 1522 aa41.23■■■■■ 4.19
SUMF1-205ENST00000458465 SNAPC4Q5SXM2 1469 aa41.12■■■■■ 4.17
SUMF1-205ENST00000458465 MAGI1Q96QZ7 1491 aaPredicted RBP41.09■■■■■ 4.17
SUMF1-205ENST00000458465 GRIN2BQ13224 1484 aa41.08■■■■■ 4.17
SUMF1-205ENST00000458465 FBLN2P98095 1184 aa41.06■■■■■ 4.16
SUMF1-205ENST00000458465 ABCA10Q8WWZ4 1543 aa40.99■■■■■ 4.15
SUMF1-205ENST00000458465 GAPVD1Q14C86 1478 aa40.94■■■■■ 4.14
SUMF1-205ENST00000458465 SYNJ2O15056 1496 aa40.93■■■■■ 4.14
SUMF1-205ENST00000458465 ABCA5Q8WWZ7 1642 aa40.92■■■■■ 4.14
SUMF1-205ENST00000458465 PBRM1Q86U86 1689 aa40.91■■■■■ 4.14
SUMF1-205ENST00000458465 CLASP1Q7Z460 1538 aa40.9■■■■■ 4.14
SUMF1-205ENST00000458465 SYNJ1O43426 1573 aa40.88■■■■■ 4.13
SUMF1-205ENST00000458465 CHMP7Q8WUX9 453 aaPredicted RBP40.88■■■■■ 4.13
SUMF1-205ENST00000458465 BIVM-ERCC5R4GMW8 1640 aa40.85■■■■■ 4.13
SUMF1-205ENST00000458465 TOP2BQ02880 1626 aa40.85■■■■■ 4.13
SUMF1-205ENST00000458465 WRNQ14191 1432 aaPredicted RBP eCLIP40.84■■■■■ 4.13
SUMF1-205ENST00000458465 ARAP1Q96P48 1450 aa40.83■■■■■ 4.13
SUMF1-205ENST00000458465 CYB5RLQ6IPT4 315 aa40.78■■■■■ 4.12
SUMF1-205ENST00000458465 ADAMTS12P58397 1594 aa40.58■■■■■ 4.09
SUMF1-205ENST00000458465 GRIN2AQ12879 1464 aa40.55■■■■■ 4.08
SUMF1-205ENST00000458465 ERICH3Q5RHP9 1530 aa40.5■■■■■ 4.07
SUMF1-205ENST00000458465 FHAD1B1AJZ9 1412 aa40.46■■■■■ 4.07
SUMF1-205ENST00000458465 NUP160Q12769 1436 aa40.43■■■■■ 4.06
SUMF1-205ENST00000458465 CEP170Q5SW79 1584 aa40.37■■■■■ 4.05
SUMF1-205ENST00000458465 SHROOM2Q13796 1616 aa40.24■■■■■ 4.03
SUMF1-205ENST00000458465 TRHP20396 242 aaPredicted RBP40.21■■■■■ 4.03
SUMF1-205ENST00000458465 ERCC6L2Q5T890 1561 aa40.18■■■■■ 4.02
SUMF1-205ENST00000458465 KIF27Q86VH2 1401 aa40.02■■■■■ 4
SUMF1-205ENST00000458465 RUSC2Q8N2Y8 1516 aa40.01■■■■■ 4
SUMF1-205ENST00000458465 CUL7Q14999 1698 aa39.96■■■■□ 3.99
SUMF1-205ENST00000458465 IGF1RP08069 1367 aa39.95■■■■□ 3.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms