RNA–Protein interactions for RNA: ENST00000507787.1

HERC2P9-201, Transcript of hect domain and RLD 2 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene HERC2P9, Length 1,023 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P9-201ENST00000507787 NISCHQ9Y2I1 1504 aa57.86■■■■■ 6.85
HERC2P9-201ENST00000507787 CCDC180Q9P1Z9 1646 aa51.45■■■■■ 5.83
HERC2P9-201ENST00000507787 ABCC9O60706 1549 aa50.31■■■■■ 5.65
HERC2P9-201ENST00000507787 RB1CC1Q8TDY2 1594 aa48.47■■■■■ 5.35
HERC2P9-201ENST00000507787 DCAF8L2P0C7V8 631 aa48.43■■■■■ 5.34
HERC2P9-201ENST00000507787 NACADO15069 1562 aa48.42■■■■■ 5.34
HERC2P9-201ENST00000507787 ZCCHC6Q5VYS8 1495 aaKnown RBP48.17■■■■■ 5.3
HERC2P9-201ENST00000507787 MYO15BQ96JP2 1530 aa48.14■■■■■ 5.3
HERC2P9-201ENST00000507787 DCAF1Q9Y4B6 1507 aa47.91■■■■■ 5.26
HERC2P9-201ENST00000507787 UNC13AQ9UPW8 1703 aa47.23■■■■■ 5.15
HERC2P9-201ENST00000507787 PABPN1Q86U42 306 aaKnown RBP eCLIP47.04■■■■■ 5.12
HERC2P9-201ENST00000507787 SCRIBQ14160 1630 aa46.89■■■■■ 5.1
HERC2P9-201ENST00000507787 BICRAQ9NZM4 1560 aa46.88■■■■■ 5.1
HERC2P9-201ENST00000507787 SHROOM4Q9ULL8 1493 aa46.55■■■■■ 5.04
HERC2P9-201ENST00000507787 DNAJC5BQ9UF47 199 aa46.14■■■■■ 4.98
HERC2P9-201ENST00000507787 EIF4G1Q04637 1599 aaKnown RBP45.71■■■■■ 4.91
HERC2P9-201ENST00000507787 CC2D2AQ9P2K1 1620 aa45.52■■■■■ 4.88
HERC2P9-201ENST00000507787 CECR2Q9BXF3 1484 aa45.25■■■■■ 4.83
HERC2P9-201ENST00000507787 BAZ1AQ9NRL2 1556 aaPredicted RBP44.89■■■■■ 4.78
HERC2P9-201ENST00000507787 SMARCA4P51532 1647 aa44.87■■■■■ 4.77
HERC2P9-201ENST00000507787 NCAPD3P42695 1498 aa44.66■■■■■ 4.74
HERC2P9-201ENST00000507787 ATAD2BQ9ULI0 1458 aa44.66■■■■■ 4.74
HERC2P9-201ENST00000507787 SMARCA2P51531 1590 aa44.65■■■■■ 4.74
HERC2P9-201ENST00000507787 MROH2BQ7Z745 1585 aa44.54■■■■■ 4.72
HERC2P9-201ENST00000507787 PEG3Q9GZU2 1588 aa44.46■■■■■ 4.71
HERC2P9-201ENST00000507787 HMGXB3Q12766 1538 aa44.43■■■■■ 4.7
HERC2P9-201ENST00000507787 BAZ1BQ9UIG0 1483 aaKnown RBP44.32■■■■■ 4.69
HERC2P9-201ENST00000507787 RSF1Q96T23 1441 aaPredicted RBP44.07■■■■■ 4.64
HERC2P9-201ENST00000507787 WIZO95785 1651 aa44.05■■■■■ 4.64
HERC2P9-201ENST00000507787 TOP2AP11388 1531 aaKnown RBP43.64■■■■■ 4.58
HERC2P9-201ENST00000507787 LAMC3Q9Y6N6 1575 aa43.5■■■■■ 4.55
HERC2P9-201ENST00000507787 NESP48681 1621 aa43.49■■■■■ 4.55
HERC2P9-201ENST00000507787 ERCC6Q03468 1493 aa43.45■■■■■ 4.55
HERC2P9-201ENST00000507787 CADPSQ9ULU8 1353 aa43.38■■■■■ 4.53
HERC2P9-201ENST00000507787 PDS5BQ9NTI5 1447 aa43.26■■■■■ 4.52
HERC2P9-201ENST00000507787 CCDC88BA6NC98 1476 aa43.13■■■■■ 4.49
HERC2P9-201ENST00000507787 CFTRP13569 1480 aa43.09■■■■■ 4.49
HERC2P9-201ENST00000507787 SUPT5HO00267 1087 aaKnown RBP43■■■■■ 4.47
HERC2P9-201ENST00000507787 CUX2O14529 1486 aa42.99■■■■■ 4.47
HERC2P9-201ENST00000507787 KIF21AQ7Z4S6 1674 aa42.98■■■■■ 4.47
HERC2P9-201ENST00000507787 FANCD2Q9BXW9 1451 aa42.85■■■■■ 4.45
HERC2P9-201ENST00000507787 THOC2Q8NI27 1593 aaKnown RBP42.85■■■■■ 4.45
HERC2P9-201ENST00000507787 CEP164Q9UPV0 1460 aa42.82■■■■■ 4.45
HERC2P9-201ENST00000507787 MRC2Q9UBG0 1479 aa42.74■■■■■ 4.43
HERC2P9-201ENST00000507787 PRDM2Q13029 1718 aa42.72■■■■■ 4.43
HERC2P9-201ENST00000507787 WDR62O43379 1518 aa42.57■■■■■ 4.41
HERC2P9-201ENST00000507787 URB2Q14146 1524 aaKnown RBP42.37■■■■■ 4.37
HERC2P9-201ENST00000507787 ABCC8Q09428 1581 aa42.26■■■■■ 4.36
HERC2P9-201ENST00000507787 TOPBP1Q92547 1522 aa42.15■■■■■ 4.34
HERC2P9-201ENST00000507787 DNMBPQ6XZF7 1577 aa42.11■■■■■ 4.33
HERC2P9-201ENST00000507787 IFT140Q96RY7 1462 aa41.93■■■■■ 4.3
HERC2P9-201ENST00000507787 CUX1P39880 1505 aa41.79■■■■■ 4.28
HERC2P9-201ENST00000507787 POLA1P09884 1462 aaPredicted RBP41.78■■■■■ 4.28
HERC2P9-201ENST00000507787 FGD5Q6ZNL6 1462 aa41.68■■■■■ 4.26
HERC2P9-201ENST00000507787 DNAJC5Q9H3Z4 198 aa41.67■■■■■ 4.26
HERC2P9-201ENST00000507787 SOGA1O94964 1423 aa41.67■■■■■ 4.26
HERC2P9-201ENST00000507787 TARBP1Q13395 1621 aaKnown RBP41.66■■■■■ 4.26
HERC2P9-201ENST00000507787 ZNF608Q9ULD9 1512 aaPredicted RBP41.65■■■■■ 4.26
HERC2P9-201ENST00000507787 WRNQ14191 1432 aaPredicted RBP eCLIP41.6■■■■■ 4.25
HERC2P9-201ENST00000507787 RAD54L2Q9Y4B4 1467 aa41.58■■■■■ 4.25
HERC2P9-201ENST00000507787 EIF4G3O43432 1585 aaKnown RBP41.5■■■■■ 4.23
HERC2P9-201ENST00000507787 TOP2BQ02880 1626 aa41.47■■■■■ 4.23
HERC2P9-201ENST00000507787 AQRO60306 1485 aaKnown RBP eCLIP41.46■■■■■ 4.23
HERC2P9-201ENST00000507787 BIVM-ERCC5R4GMW8 1640 aa41.44■■■■■ 4.22
HERC2P9-201ENST00000507787 WDR97A6NE52 1622 aa41.43■■■■■ 4.22
HERC2P9-201ENST00000507787 SYNJ1O43426 1573 aa41.4■■■■■ 4.22
HERC2P9-201ENST00000507787 TDRD9Q8NDG6 1382 aaKnown RBP41.39■■■■■ 4.22
HERC2P9-201ENST00000507787 ABCA10Q8WWZ4 1543 aa41.31■■■■■ 4.2
HERC2P9-201ENST00000507787 OSCARQ8IYS5 282 aa41.27■■■■■ 4.2
HERC2P9-201ENST00000507787 GRIN2BQ13224 1484 aa41.18■■■■■ 4.18
HERC2P9-201ENST00000507787 GAPVD1Q14C86 1478 aa41.18■■■■■ 4.18
HERC2P9-201ENST00000507787 ABCA5Q8WWZ7 1642 aa41.09■■■■■ 4.17
HERC2P9-201ENST00000507787 SNAPC4Q5SXM2 1469 aa41.08■■■■■ 4.17
HERC2P9-201ENST00000507787 MAGI1Q96QZ7 1491 aaPredicted RBP41.08■■■■■ 4.17
HERC2P9-201ENST00000507787 FBLN2P98095 1184 aa41.05■■■■■ 4.16
HERC2P9-201ENST00000507787 PBRM1Q86U86 1689 aa41.02■■■■■ 4.16
HERC2P9-201ENST00000507787 CHMP7Q8WUX9 453 aaPredicted RBP40.96■■■■■ 4.15
HERC2P9-201ENST00000507787 CHD1O14646 1710 aa40.96■■■■■ 4.15
HERC2P9-201ENST00000507787 SYNJ2O15056 1496 aa40.9■■■■■ 4.14
HERC2P9-201ENST00000507787 ERICH3Q5RHP9 1530 aa40.83■■■■■ 4.13
HERC2P9-201ENST00000507787 KIF27Q86VH2 1401 aa40.76■■■■■ 4.12
HERC2P9-201ENST00000507787 FHAD1B1AJZ9 1412 aa40.72■■■■■ 4.11
HERC2P9-201ENST00000507787 ADAMTS12P58397 1594 aa40.7■■■■■ 4.11
HERC2P9-201ENST00000507787 TRIM41Q8WV44 630 aa40.68■■■■■ 4.1
HERC2P9-201ENST00000507787 GRIN2AQ12879 1464 aa40.62■■■■■ 4.09
HERC2P9-201ENST00000507787 IGF1RP08069 1367 aa40.55■■■■■ 4.08
HERC2P9-201ENST00000507787 CLASP1Q7Z460 1538 aa40.54■■■■■ 4.08
HERC2P9-201ENST00000507787 ARHGEF11O15085 1522 aa40.48■■■■■ 4.07
HERC2P9-201ENST00000507787 RIMBP3CA6NJZ7 1639 aa40.47■■■■■ 4.07
HERC2P9-201ENST00000507787 RIMBP3BA6NNM3 1639 aa40.47■■■■■ 4.07
HERC2P9-201ENST00000507787 RIMBP3Q9UFD9 1639 aa40.47■■■■■ 4.07
HERC2P9-201ENST00000507787 CUL7Q14999 1698 aa40.46■■■■■ 4.07
HERC2P9-201ENST00000507787 NUP160Q12769 1436 aa40.43■■■■■ 4.06
HERC2P9-201ENST00000507787 CEP170Q5SW79 1584 aa40.36■■■■■ 4.05
HERC2P9-201ENST00000507787 CARMIL1Q5VZK9 1371 aa40.35■■■■■ 4.05
HERC2P9-201ENST00000507787 RUSC2Q8N2Y8 1516 aa40.25■■■■■ 4.03
HERC2P9-201ENST00000507787 CYB5RLQ6IPT4 315 aa40.17■■■■■ 4.02
HERC2P9-201ENST00000507787 ARAP1Q96P48 1450 aa40.13■■■■■ 4.02
HERC2P9-201ENST00000507787 RAPGEF2Q9Y4G8 1499 aa40.1■■■■■ 4.01
HERC2P9-201ENST00000507787 SHROOM2Q13796 1616 aa40.09■■■■■ 4.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms