RNA–Protein interactions for RNA: ENST00000585098.5

NDEL1-219, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3 BASIC

Gene NDEL1, Length 454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-219ENST00000585098 NISCHQ9Y2I1 1504 aa57.69■■■■■ 6.83
NDEL1-219ENST00000585098 CCDC180Q9P1Z9 1646 aa51.29■■■■■ 5.8
NDEL1-219ENST00000585098 ABCC9O60706 1549 aa50.45■■■■■ 5.67
NDEL1-219ENST00000585098 RB1CC1Q8TDY2 1594 aa48.39■■■■■ 5.34
NDEL1-219ENST00000585098 DCAF8L2P0C7V8 631 aa48.37■■■■■ 5.33
NDEL1-219ENST00000585098 NACADO15069 1562 aa48.3■■■■■ 5.32
NDEL1-219ENST00000585098 ZCCHC6Q5VYS8 1495 aaKnown RBP48.02■■■■■ 5.28
NDEL1-219ENST00000585098 MYO15BQ96JP2 1530 aa47.94■■■■■ 5.26
NDEL1-219ENST00000585098 DCAF1Q9Y4B6 1507 aa47.69■■■■■ 5.22
NDEL1-219ENST00000585098 UNC13AQ9UPW8 1703 aa47.24■■■■■ 5.15
NDEL1-219ENST00000585098 PABPN1Q86U42 306 aaKnown RBP eCLIP47.16■■■■■ 5.14
NDEL1-219ENST00000585098 BICRAQ9NZM4 1560 aa46.94■■■■■ 5.11
NDEL1-219ENST00000585098 SCRIBQ14160 1630 aa46.86■■■■■ 5.09
NDEL1-219ENST00000585098 DNAJC5BQ9UF47 199 aa46.47■■■■■ 5.03
NDEL1-219ENST00000585098 SHROOM4Q9ULL8 1493 aa46.4■■■■■ 5.02
NDEL1-219ENST00000585098 EIF4G1Q04637 1599 aaKnown RBP45.73■■■■■ 4.91
NDEL1-219ENST00000585098 CC2D2AQ9P2K1 1620 aa45.58■■■■■ 4.89
NDEL1-219ENST00000585098 CECR2Q9BXF3 1484 aa45.33■■■■■ 4.85
NDEL1-219ENST00000585098 SMARCA4P51532 1647 aa44.78■■■■■ 4.76
NDEL1-219ENST00000585098 BAZ1AQ9NRL2 1556 aaPredicted RBP44.71■■■■■ 4.75
NDEL1-219ENST00000585098 NCAPD3P42695 1498 aa44.6■■■■■ 4.73
NDEL1-219ENST00000585098 ATAD2BQ9ULI0 1458 aa44.6■■■■■ 4.73
NDEL1-219ENST00000585098 SMARCA2P51531 1590 aa44.52■■■■■ 4.72
NDEL1-219ENST00000585098 MROH2BQ7Z745 1585 aa44.48■■■■■ 4.71
NDEL1-219ENST00000585098 PEG3Q9GZU2 1588 aa44.33■■■■■ 4.69
NDEL1-219ENST00000585098 HMGXB3Q12766 1538 aa44.33■■■■■ 4.69
NDEL1-219ENST00000585098 BAZ1BQ9UIG0 1483 aaKnown RBP44.23■■■■■ 4.67
NDEL1-219ENST00000585098 WIZO95785 1651 aa43.97■■■■■ 4.63
NDEL1-219ENST00000585098 RSF1Q96T23 1441 aaPredicted RBP43.92■■■■■ 4.62
NDEL1-219ENST00000585098 NESP48681 1621 aa43.6■■■■■ 4.57
NDEL1-219ENST00000585098 ERCC6Q03468 1493 aa43.49■■■■■ 4.55
NDEL1-219ENST00000585098 TOP2AP11388 1531 aaKnown RBP43.48■■■■■ 4.55
NDEL1-219ENST00000585098 LAMC3Q9Y6N6 1575 aa43.42■■■■■ 4.54
NDEL1-219ENST00000585098 CADPSQ9ULU8 1353 aa43.31■■■■■ 4.52
NDEL1-219ENST00000585098 PDS5BQ9NTI5 1447 aa43.17■■■■■ 4.5
NDEL1-219ENST00000585098 CUX2O14529 1486 aa43.05■■■■■ 4.48
NDEL1-219ENST00000585098 KIF21AQ7Z4S6 1674 aa43.02■■■■■ 4.48
NDEL1-219ENST00000585098 CCDC88BA6NC98 1476 aa43.01■■■■■ 4.48
NDEL1-219ENST00000585098 CFTRP13569 1480 aa43■■■■■ 4.47
NDEL1-219ENST00000585098 THOC2Q8NI27 1593 aaKnown RBP42.92■■■■■ 4.46
NDEL1-219ENST00000585098 FANCD2Q9BXW9 1451 aa42.81■■■■■ 4.44
NDEL1-219ENST00000585098 CEP164Q9UPV0 1460 aa42.76■■■■■ 4.44
NDEL1-219ENST00000585098 SUPT5HO00267 1087 aaKnown RBP42.76■■■■■ 4.44
NDEL1-219ENST00000585098 MRC2Q9UBG0 1479 aa42.74■■■■■ 4.43
NDEL1-219ENST00000585098 WDR62O43379 1518 aa42.58■■■■■ 4.41
NDEL1-219ENST00000585098 PRDM2Q13029 1718 aa42.56■■■■■ 4.4
NDEL1-219ENST00000585098 URB2Q14146 1524 aaKnown RBP42.39■■■■■ 4.38
NDEL1-219ENST00000585098 TOPBP1Q92547 1522 aa42.1■■■■■ 4.33
NDEL1-219ENST00000585098 ABCC8Q09428 1581 aa42.06■■■■■ 4.32
NDEL1-219ENST00000585098 DNMBPQ6XZF7 1577 aa42.01■■■■■ 4.32
NDEL1-219ENST00000585098 DNAJC5Q9H3Z4 198 aa41.95■■■■■ 4.31
NDEL1-219ENST00000585098 IFT140Q96RY7 1462 aa41.87■■■■■ 4.29
NDEL1-219ENST00000585098 POLA1P09884 1462 aaPredicted RBP41.73■■■■■ 4.27
NDEL1-219ENST00000585098 CUX1P39880 1505 aa41.73■■■■■ 4.27
NDEL1-219ENST00000585098 ZNF608Q9ULD9 1512 aaPredicted RBP41.71■■■■■ 4.27
NDEL1-219ENST00000585098 TARBP1Q13395 1621 aaKnown RBP41.63■■■■■ 4.26
NDEL1-219ENST00000585098 FGD5Q6ZNL6 1462 aa41.62■■■■■ 4.25
NDEL1-219ENST00000585098 SOGA1O94964 1423 aa41.59■■■■■ 4.25
NDEL1-219ENST00000585098 RAD54L2Q9Y4B4 1467 aa41.58■■■■■ 4.25
NDEL1-219ENST00000585098 EIF4G3O43432 1585 aaKnown RBP41.5■■■■■ 4.23
NDEL1-219ENST00000585098 AQRO60306 1485 aaKnown RBP eCLIP41.47■■■■■ 4.236e-9■■■■□ 20
NDEL1-219ENST00000585098 WRNQ14191 1432 aaPredicted RBP eCLIP41.42■■■■■ 4.22
NDEL1-219ENST00000585098 TDRD9Q8NDG6 1382 aaKnown RBP41.39■■■■■ 4.22
NDEL1-219ENST00000585098 TOP2BQ02880 1626 aa41.3■■■■■ 4.2
NDEL1-219ENST00000585098 SYNJ1O43426 1573 aa41.3■■■■■ 4.2
NDEL1-219ENST00000585098 OSCARQ8IYS5 282 aa41.29■■■■■ 4.2
NDEL1-219ENST00000585098 BIVM-ERCC5R4GMW8 1640 aa41.28■■■■■ 4.2
NDEL1-219ENST00000585098 WDR97A6NE52 1622 aa41.26■■■■■ 4.19
NDEL1-219ENST00000585098 ABCA10Q8WWZ4 1543 aa41.18■■■■■ 4.18
NDEL1-219ENST00000585098 GRIN2BQ13224 1484 aa41.09■■■■■ 4.17
NDEL1-219ENST00000585098 GAPVD1Q14C86 1478 aa41.09■■■■■ 4.17
NDEL1-219ENST00000585098 SNAPC4Q5SXM2 1469 aa41.07■■■■■ 4.16
NDEL1-219ENST00000585098 FBLN2P98095 1184 aa41.05■■■■■ 4.16
NDEL1-219ENST00000585098 ABCA5Q8WWZ7 1642 aa41.01■■■■■ 4.16
NDEL1-219ENST00000585098 CHD1O14646 1710 aa40.98■■■■■ 4.15
NDEL1-219ENST00000585098 MAGI1Q96QZ7 1491 aaPredicted RBP40.98■■■■■ 4.15
NDEL1-219ENST00000585098 PBRM1Q86U86 1689 aa40.94■■■■■ 4.15
NDEL1-219ENST00000585098 CHMP7Q8WUX9 453 aaPredicted RBP40.89■■■■■ 4.14
NDEL1-219ENST00000585098 SYNJ2O15056 1496 aa40.84■■■■■ 4.13
NDEL1-219ENST00000585098 ERICH3Q5RHP9 1530 aa40.68■■■■■ 4.1
NDEL1-219ENST00000585098 ADAMTS12P58397 1594 aa40.65■■■■■ 4.1
NDEL1-219ENST00000585098 FHAD1B1AJZ9 1412 aa40.6■■■■■ 4.09
NDEL1-219ENST00000585098 RIMBP3CA6NJZ7 1639 aa40.59■■■■■ 4.09
NDEL1-219ENST00000585098 RIMBP3BA6NNM3 1639 aa40.59■■■■■ 4.09
NDEL1-219ENST00000585098 RIMBP3Q9UFD9 1639 aa40.59■■■■■ 4.09
NDEL1-219ENST00000585098 ARHGEF11O15085 1522 aa40.58■■■■■ 4.09
NDEL1-219ENST00000585098 TRIM41Q8WV44 630 aa40.57■■■■■ 4.09
NDEL1-219ENST00000585098 KIF27Q86VH2 1401 aa40.57■■■■■ 4.08
NDEL1-219ENST00000585098 GRIN2AQ12879 1464 aa40.57■■■■■ 4.08
NDEL1-219ENST00000585098 CLASP1Q7Z460 1538 aa40.57■■■■■ 4.08
NDEL1-219ENST00000585098 IGF1RP08069 1367 aa40.43■■■■■ 4.06
NDEL1-219ENST00000585098 NUP160Q12769 1436 aa40.39■■■■■ 4.06
NDEL1-219ENST00000585098 CEP170Q5SW79 1584 aa40.36■■■■■ 4.05
NDEL1-219ENST00000585098 CYB5RLQ6IPT4 315 aa40.28■■■■■ 4.04
NDEL1-219ENST00000585098 CUL7Q14999 1698 aa40.26■■■■■ 4.04
NDEL1-219ENST00000585098 ARAP1Q96P48 1450 aa40.26■■■■■ 4.03
NDEL1-219ENST00000585098 CARMIL1Q5VZK9 1371 aa40.19■■■■■ 4.02
NDEL1-219ENST00000585098 RUSC2Q8N2Y8 1516 aa40.17■■■■■ 4.02
NDEL1-219ENST00000585098 SHROOM2Q13796 1616 aa40.06■■■■■ 4
NDEL1-219ENST00000585098 ERCC6L2Q5T890 1561 aa40.03■■■■■ 4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms