RNA–Protein interactions for RNA: ENST00000424406.2

NKX2-5-202, Transcript of NK2 homeobox 5, humanhuman

TSL 1 (best) BASIC

Gene NKX2-5, Length 1,124 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5-202ENST00000424406 NISCHQ9Y2I1 1504 aa56.74■■■■■ 6.67
NKX2-5-202ENST00000424406 ABCC9O60706 1549 aa50.87■■■■■ 5.73
NKX2-5-202ENST00000424406 CCDC180Q9P1Z9 1646 aa50.74■■■■■ 5.71
NKX2-5-202ENST00000424406 RB1CC1Q8TDY2 1594 aa48.31■■■■■ 5.32
NKX2-5-202ENST00000424406 NACADO15069 1562 aa48■■■■■ 5.28
NKX2-5-202ENST00000424406 DCAF8L2P0C7V8 631 aa47.97■■■■■ 5.27
NKX2-5-202ENST00000424406 DNAJC5BQ9UF47 199 aa47.77■■■■■ 5.24
NKX2-5-202ENST00000424406 PABPN1Q86U42 306 aaKnown RBP eCLIP47.45■■■■■ 5.19
NKX2-5-202ENST00000424406 MYO15BQ96JP2 1530 aa47.35■■■■■ 5.17
NKX2-5-202ENST00000424406 UNC13AQ9UPW8 1703 aa47.23■■■■■ 5.15
NKX2-5-202ENST00000424406 ZCCHC6Q5VYS8 1495 aaKnown RBP47.03■■■■■ 5.12
NKX2-5-202ENST00000424406 BICRAQ9NZM4 1560 aa47.01■■■■■ 5.12
NKX2-5-202ENST00000424406 DCAF1Q9Y4B6 1507 aa46.79■■■■■ 5.08
NKX2-5-202ENST00000424406 SCRIBQ14160 1630 aa46.39■■■■■ 5.02
NKX2-5-202ENST00000424406 SHROOM4Q9ULL8 1493 aa46.21■■■■■ 4.99
NKX2-5-202ENST00000424406 CC2D2AQ9P2K1 1620 aa45.88■■■■■ 4.94
NKX2-5-202ENST00000424406 EIF4G1Q04637 1599 aaKnown RBP45.8■■■■■ 4.92
NKX2-5-202ENST00000424406 CECR2Q9BXF3 1484 aa45.77■■■■■ 4.92
NKX2-5-202ENST00000424406 NCAPD3P42695 1498 aa44.39■■■■■ 4.7
NKX2-5-202ENST00000424406 ATAD2BQ9ULI0 1458 aa44.29■■■■■ 4.68
NKX2-5-202ENST00000424406 SMARCA4P51532 1647 aa44.21■■■■■ 4.67
NKX2-5-202ENST00000424406 SMARCA2P51531 1590 aa44.08■■■■■ 4.65
NKX2-5-202ENST00000424406 HMGXB3Q12766 1538 aa44■■■■■ 4.63
NKX2-5-202ENST00000424406 BAZ1AQ9NRL2 1556 aaPredicted RBP43.98■■■■■ 4.63
NKX2-5-202ENST00000424406 ERCC6Q03468 1493 aa43.83■■■■■ 4.61
NKX2-5-202ENST00000424406 BAZ1BQ9UIG0 1483 aaKnown RBP43.83■■■■■ 4.61
NKX2-5-202ENST00000424406 MROH2BQ7Z745 1585 aa43.79■■■■■ 4.6
NKX2-5-202ENST00000424406 PEG3Q9GZU2 1588 aa43.75■■■■■ 4.59
NKX2-5-202ENST00000424406 NESP48681 1621 aa43.75■■■■■ 4.59
NKX2-5-202ENST00000424406 DNAJC5Q9H3Z4 198 aa43.69■■■■■ 4.58
NKX2-5-202ENST00000424406 CUX2O14529 1486 aa43.69■■■■■ 4.58
NKX2-5-202ENST00000424406 LAMC3Q9Y6N6 1575 aa43.29■■■■■ 4.52
NKX2-5-202ENST00000424406 WIZO95785 1651 aa43.23■■■■■ 4.51
NKX2-5-202ENST00000424406 THOC2Q8NI27 1593 aaKnown RBP43.18■■■■■ 4.5
NKX2-5-202ENST00000424406 PDS5BQ9NTI5 1447 aa43.09■■■■■ 4.49
NKX2-5-202ENST00000424406 CADPSQ9ULU8 1353 aa43.06■■■■■ 4.48
NKX2-5-202ENST00000424406 KIF21AQ7Z4S6 1674 aa43.06■■■■■ 4.48
NKX2-5-202ENST00000424406 RSF1Q96T23 1441 aaPredicted RBP42.91■■■■■ 4.46
NKX2-5-202ENST00000424406 MRC2Q9UBG0 1479 aa42.73■■■■■ 4.43
NKX2-5-202ENST00000424406 TOP2AP11388 1531 aaKnown RBP42.64■■■■■ 4.42
NKX2-5-202ENST00000424406 WDR62O43379 1518 aa42.61■■■■■ 4.41
NKX2-5-202ENST00000424406 CFTRP13569 1480 aa42.58■■■■■ 4.41
NKX2-5-202ENST00000424406 FANCD2Q9BXW9 1451 aa42.56■■■■■ 4.4
NKX2-5-202ENST00000424406 CEP164Q9UPV0 1460 aa42.56■■■■■ 4.4
NKX2-5-202ENST00000424406 URB2Q14146 1524 aaKnown RBP42.25■■■■■ 4.35
NKX2-5-202ENST00000424406 CCDC88BA6NC98 1476 aa42.23■■■■■ 4.35
NKX2-5-202ENST00000424406 PRDM2Q13029 1718 aa41.98■■■■■ 4.31
NKX2-5-202ENST00000424406 TRIM41Q8WV44 630 aa41.84■■■■■ 4.29
NKX2-5-202ENST00000424406 OSCARQ8IYS5 282 aa41.79■■■■■ 4.28
NKX2-5-202ENST00000424406 TOPBP1Q92547 1522 aa41.77■■■■■ 4.28
NKX2-5-202ENST00000424406 ZNF608Q9ULD9 1512 aaPredicted RBP41.74■■■■■ 4.27
NKX2-5-202ENST00000424406 IFT140Q96RY7 1462 aa41.72■■■■■ 4.27
NKX2-5-202ENST00000424406 ABCC8Q09428 1581 aa41.58■■■■■ 4.25
NKX2-5-202ENST00000424406 DNMBPQ6XZF7 1577 aa41.58■■■■■ 4.25
NKX2-5-202ENST00000424406 EIF4G3O43432 1585 aaKnown RBP41.41■■■■■ 4.22
NKX2-5-202ENST00000424406 AQRO60306 1485 aaKnown RBP eCLIP41.38■■■■■ 4.21
NKX2-5-202ENST00000424406 TARBP1Q13395 1621 aaKnown RBP41.37■■■■■ 4.21
NKX2-5-202ENST00000424406 POLA1P09884 1462 aaPredicted RBP41.36■■■■■ 4.21
NKX2-5-202ENST00000424406 RAD54L2Q9Y4B4 1467 aa41.27■■■■■ 4.2
NKX2-5-202ENST00000424406 RIMBP3CA6NJZ7 1639 aa41.2■■■■■ 4.19
NKX2-5-202ENST00000424406 RIMBP3BA6NNM3 1639 aa41.2■■■■■ 4.19
NKX2-5-202ENST00000424406 RIMBP3Q9UFD9 1639 aa41.2■■■■■ 4.19
NKX2-5-202ENST00000424406 SOGA1O94964 1423 aa41.18■■■■■ 4.18
NKX2-5-202ENST00000424406 TDRD9Q8NDG6 1382 aaKnown RBP41.15■■■■■ 4.18
NKX2-5-202ENST00000424406 SUPT5HO00267 1087 aaKnown RBP41.14■■■■■ 4.18
NKX2-5-202ENST00000424406 FGD5Q6ZNL6 1462 aa41.11■■■■■ 4.17
NKX2-5-202ENST00000424406 CUX1P39880 1505 aa41.11■■■■■ 4.17
NKX2-5-202ENST00000424406 ARHGEF11O15085 1522 aa41.1■■■■■ 4.17
NKX2-5-202ENST00000424406 FBLN2P98095 1184 aa41.08■■■■■ 4.17
NKX2-5-202ENST00000424406 CHD1O14646 1710 aa41.07■■■■■ 4.16
NKX2-5-202ENST00000424406 SNAPC4Q5SXM2 1469 aa40.9■■■■■ 4.14
NKX2-5-202ENST00000424406 CYB5RLQ6IPT4 315 aa40.87■■■■■ 4.13
NKX2-5-202ENST00000424406 WDR97A6NE52 1622 aa40.82■■■■■ 4.13
NKX2-5-202ENST00000424406 GRIN2BQ13224 1484 aa40.77■■■■■ 4.12
NKX2-5-202ENST00000424406 CHMP7Q8WUX9 453 aaPredicted RBP40.75■■■■■ 4.11
NKX2-5-202ENST00000424406 ARAP1Q96P48 1450 aa40.74■■■■■ 4.11
NKX2-5-202ENST00000424406 MAGI1Q96QZ7 1491 aaPredicted RBP40.74■■■■■ 4.11
NKX2-5-202ENST00000424406 GAPVD1Q14C86 1478 aa40.66■■■■■ 4.1
NKX2-5-202ENST00000424406 CLASP1Q7Z460 1538 aa40.64■■■■■ 4.1
NKX2-5-202ENST00000424406 SYNJ2O15056 1496 aa40.63■■■■■ 4.09
NKX2-5-202ENST00000424406 ABCA10Q8WWZ4 1543 aa40.62■■■■■ 4.09
NKX2-5-202ENST00000424406 SYNJ1O43426 1573 aa40.57■■■■■ 4.08
NKX2-5-202ENST00000424406 PBRM1Q86U86 1689 aa40.55■■■■■ 4.08
NKX2-5-202ENST00000424406 ABCA5Q8WWZ7 1642 aa40.53■■■■■ 4.08
NKX2-5-202ENST00000424406 WRNQ14191 1432 aaPredicted RBP eCLIP40.48■■■■■ 4.07
NKX2-5-202ENST00000424406 TOP2BQ02880 1626 aa40.41■■■■■ 4.06
NKX2-5-202ENST00000424406 BIVM-ERCC5R4GMW8 1640 aa40.38■■■■■ 4.05
NKX2-5-202ENST00000424406 TRHP20396 242 aaPredicted RBP40.35■■■■■ 4.05
NKX2-5-202ENST00000424406 GRIN2AQ12879 1464 aa40.26■■■■■ 4.03
NKX2-5-202ENST00000424406 ADAMTS12P58397 1594 aa40.23■■■■■ 4.03
NKX2-5-202ENST00000424406 FHAD1B1AJZ9 1412 aa40.14■■■■■ 4.02
NKX2-5-202ENST00000424406 NUP160Q12769 1436 aa40.14■■■■■ 4.02
NKX2-5-202ENST00000424406 CEP170Q5SW79 1584 aa40.14■■■■■ 4.02
NKX2-5-202ENST00000424406 ERCC6L2Q5T890 1561 aa40.11■■■■■ 4.01
NKX2-5-202ENST00000424406 ERICH3Q5RHP9 1530 aa40.07■■■■■ 4.01
NKX2-5-202ENST00000424406 SHROOM2Q13796 1616 aa39.9■■■■□ 3.98
NKX2-5-202ENST00000424406 JPH4Q96JJ6 628 aa39.77■■■■□ 3.96
NKX2-5-202ENST00000424406 PRG4Q92954 1404 aaPredicted RBP39.76■■■■□ 3.96
NKX2-5-202ENST00000424406 IGF1RP08069 1367 aa39.71■■■■□ 3.95
NKX2-5-202ENST00000424406 RUSC2Q8N2Y8 1516 aa39.65■■■■□ 3.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms