RNA–Protein interactions for RNA: ENST00000521848.1

NKX2-5-204, Transcript of NK2 homeobox 5, humanhuman

TSL 2 BASIC

Gene NKX2-5, Length 1,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5-204ENST00000521848 NISCHQ9Y2I1 1504 aa58.34■■■■■ 6.93
NKX2-5-204ENST00000521848 CCDC180Q9P1Z9 1646 aa51.86■■■■■ 5.89
NKX2-5-204ENST00000521848 ABCC9O60706 1549 aa50.44■■■■■ 5.67
NKX2-5-204ENST00000521848 NACADO15069 1562 aa48.73■■■■■ 5.39
NKX2-5-204ENST00000521848 RB1CC1Q8TDY2 1594 aa48.7■■■■■ 5.39
NKX2-5-204ENST00000521848 ZCCHC6Q5VYS8 1495 aaKnown RBP48.65■■■■■ 5.38
NKX2-5-204ENST00000521848 MYO15BQ96JP2 1530 aa48.6■■■■■ 5.37
NKX2-5-204ENST00000521848 DCAF1Q9Y4B6 1507 aa48.41■■■■■ 5.34
NKX2-5-204ENST00000521848 DCAF8L2P0C7V8 631 aa48.39■■■■■ 5.34
NKX2-5-204ENST00000521848 UNC13AQ9UPW8 1703 aa47.54■■■■■ 5.2
NKX2-5-204ENST00000521848 BICRAQ9NZM4 1560 aa47.24■■■■■ 5.15
NKX2-5-204ENST00000521848 SCRIBQ14160 1630 aa47.16■■■■■ 5.14
NKX2-5-204ENST00000521848 PABPN1Q86U42 306 aaKnown RBP eCLIP47.1■■■■■ 5.13
NKX2-5-204ENST00000521848 SHROOM4Q9ULL8 1493 aa46.91■■■■■ 5.1
NKX2-5-204ENST00000521848 DNAJC5BQ9UF47 199 aa46.2■■■■■ 4.99
NKX2-5-204ENST00000521848 EIF4G1Q04637 1599 aaKnown RBP45.95■■■■■ 4.95
NKX2-5-204ENST00000521848 CC2D2AQ9P2K1 1620 aa45.7■■■■■ 4.91
NKX2-5-204ENST00000521848 CECR2Q9BXF3 1484 aa45.37■■■■■ 4.85
NKX2-5-204ENST00000521848 SMARCA4P51532 1647 aa45.22■■■■■ 4.83
NKX2-5-204ENST00000521848 BAZ1AQ9NRL2 1556 aaPredicted RBP45.21■■■■■ 4.83
NKX2-5-204ENST00000521848 NCAPD3P42695 1498 aa44.98■■■■■ 4.79
NKX2-5-204ENST00000521848 ATAD2BQ9ULI0 1458 aa44.97■■■■■ 4.79
NKX2-5-204ENST00000521848 SMARCA2P51531 1590 aa44.94■■■■■ 4.78
NKX2-5-204ENST00000521848 MROH2BQ7Z745 1585 aa44.9■■■■■ 4.78
NKX2-5-204ENST00000521848 PEG3Q9GZU2 1588 aa44.89■■■■■ 4.78
NKX2-5-204ENST00000521848 HMGXB3Q12766 1538 aa44.76■■■■■ 4.76
NKX2-5-204ENST00000521848 BAZ1BQ9UIG0 1483 aaKnown RBP44.55■■■■■ 4.72
NKX2-5-204ENST00000521848 RSF1Q96T23 1441 aaPredicted RBP44.47■■■■■ 4.71
NKX2-5-204ENST00000521848 WIZO95785 1651 aa44.38■■■■■ 4.69
NKX2-5-204ENST00000521848 TOP2AP11388 1531 aaKnown RBP44.01■■■■■ 4.64
NKX2-5-204ENST00000521848 LAMC3Q9Y6N6 1575 aa43.74■■■■■ 4.59
NKX2-5-204ENST00000521848 NESP48681 1621 aa43.7■■■■■ 4.59
NKX2-5-204ENST00000521848 CADPSQ9ULU8 1353 aa43.62■■■■■ 4.57
NKX2-5-204ENST00000521848 ERCC6Q03468 1493 aa43.47■■■■■ 4.55
NKX2-5-204ENST00000521848 CCDC88BA6NC98 1476 aa43.45■■■■■ 4.55
NKX2-5-204ENST00000521848 CFTRP13569 1480 aa43.42■■■■■ 4.54
NKX2-5-204ENST00000521848 PDS5BQ9NTI5 1447 aa43.41■■■■■ 4.54
NKX2-5-204ENST00000521848 SUPT5HO00267 1087 aaKnown RBP43.21■■■■■ 4.51
NKX2-5-204ENST00000521848 KIF21AQ7Z4S6 1674 aa43.2■■■■■ 4.51
NKX2-5-204ENST00000521848 CUX2O14529 1486 aa43.12■■■■■ 4.49
NKX2-5-204ENST00000521848 THOC2Q8NI27 1593 aaKnown RBP43.1■■■■■ 4.49
NKX2-5-204ENST00000521848 FANCD2Q9BXW9 1451 aa43.08■■■■■ 4.49
NKX2-5-204ENST00000521848 PRDM2Q13029 1718 aa43.06■■■■■ 4.48
NKX2-5-204ENST00000521848 CEP164Q9UPV0 1460 aa43.02■■■■■ 4.48
NKX2-5-204ENST00000521848 MRC2Q9UBG0 1479 aa42.94■■■■■ 4.47
NKX2-5-204ENST00000521848 WDR62O43379 1518 aa42.83■■■■■ 4.45
NKX2-5-204ENST00000521848 URB2Q14146 1524 aaKnown RBP42.65■■■■■ 4.42
NKX2-5-204ENST00000521848 ABCC8Q09428 1581 aa42.49■■■■■ 4.39
NKX2-5-204ENST00000521848 TOPBP1Q92547 1522 aa42.41■■■■■ 4.38
NKX2-5-204ENST00000521848 DNMBPQ6XZF7 1577 aa42.39■■■■■ 4.38
NKX2-5-204ENST00000521848 IFT140Q96RY7 1462 aa42.15■■■■■ 4.34
NKX2-5-204ENST00000521848 CUX1P39880 1505 aa42.14■■■■■ 4.34
NKX2-5-204ENST00000521848 POLA1P09884 1462 aaPredicted RBP42.07■■■■■ 4.33
NKX2-5-204ENST00000521848 TARBP1Q13395 1621 aaKnown RBP41.97■■■■■ 4.31
NKX2-5-204ENST00000521848 FGD5Q6ZNL6 1462 aa41.95■■■■■ 4.31
NKX2-5-204ENST00000521848 WRNQ14191 1432 aaPredicted RBP eCLIP41.9■■■■■ 4.3
NKX2-5-204ENST00000521848 ZNF608Q9ULD9 1512 aaPredicted RBP41.87■■■■■ 4.29
NKX2-5-204ENST00000521848 SOGA1O94964 1423 aa41.86■■■■■ 4.29
NKX2-5-204ENST00000521848 TOP2BQ02880 1626 aa41.84■■■■■ 4.29
NKX2-5-204ENST00000521848 BIVM-ERCC5R4GMW8 1640 aa41.84■■■■■ 4.29
NKX2-5-204ENST00000521848 RAD54L2Q9Y4B4 1467 aa41.8■■■■■ 4.28
NKX2-5-204ENST00000521848 SYNJ1O43426 1573 aa41.77■■■■■ 4.28
NKX2-5-204ENST00000521848 WDR97A6NE52 1622 aa41.75■■■■■ 4.27
NKX2-5-204ENST00000521848 EIF4G3O43432 1585 aaKnown RBP41.73■■■■■ 4.27
NKX2-5-204ENST00000521848 ABCA10Q8WWZ4 1543 aa41.64■■■■■ 4.26
NKX2-5-204ENST00000521848 AQRO60306 1485 aaKnown RBP eCLIP41.63■■■■■ 4.25
NKX2-5-204ENST00000521848 DNAJC5Q9H3Z4 198 aa41.59■■■■■ 4.25
NKX2-5-204ENST00000521848 TDRD9Q8NDG6 1382 aaKnown RBP41.56■■■■■ 4.24
NKX2-5-204ENST00000521848 ABCA5Q8WWZ7 1642 aa41.44■■■■■ 4.22
NKX2-5-204ENST00000521848 GRIN2BQ13224 1484 aa41.41■■■■■ 4.22
NKX2-5-204ENST00000521848 GAPVD1Q14C86 1478 aa41.41■■■■■ 4.22
NKX2-5-204ENST00000521848 MAGI1Q96QZ7 1491 aaPredicted RBP41.32■■■■■ 4.2
NKX2-5-204ENST00000521848 SNAPC4Q5SXM2 1469 aa41.28■■■■■ 4.2
NKX2-5-204ENST00000521848 PBRM1Q86U86 1689 aa41.27■■■■■ 4.2
NKX2-5-204ENST00000521848 OSCARQ8IYS5 282 aa41.26■■■■■ 4.2
NKX2-5-204ENST00000521848 ERICH3Q5RHP9 1530 aa41.14■■■■■ 4.18
NKX2-5-204ENST00000521848 CHD1O14646 1710 aa41.14■■■■■ 4.18
NKX2-5-204ENST00000521848 SYNJ2O15056 1496 aa41.13■■■■■ 4.17
NKX2-5-204ENST00000521848 KIF27Q86VH2 1401 aa41.03■■■■■ 4.16
NKX2-5-204ENST00000521848 ADAMTS12P58397 1594 aa41■■■■■ 4.15
NKX2-5-204ENST00000521848 CHMP7Q8WUX9 453 aaPredicted RBP41■■■■■ 4.15
NKX2-5-204ENST00000521848 FBLN2P98095 1184 aa40.99■■■■■ 4.15
NKX2-5-204ENST00000521848 FHAD1B1AJZ9 1412 aa40.96■■■■■ 4.15
NKX2-5-204ENST00000521848 TRIM41Q8WV44 630 aa40.89■■■■■ 4.14
NKX2-5-204ENST00000521848 IGF1RP08069 1367 aa40.86■■■■■ 4.13
NKX2-5-204ENST00000521848 GRIN2AQ12879 1464 aa40.86■■■■■ 4.13
NKX2-5-204ENST00000521848 CLASP1Q7Z460 1538 aa40.81■■■■■ 4.12
NKX2-5-204ENST00000521848 CUL7Q14999 1698 aa40.76■■■■■ 4.12
NKX2-5-204ENST00000521848 NUP160Q12769 1436 aa40.74■■■■■ 4.11
NKX2-5-204ENST00000521848 CEP170Q5SW79 1584 aa40.63■■■■■ 4.09
NKX2-5-204ENST00000521848 ARHGEF11O15085 1522 aa40.61■■■■■ 4.09
NKX2-5-204ENST00000521848 RUSC2Q8N2Y8 1516 aa40.6■■■■■ 4.09
NKX2-5-204ENST00000521848 CARMIL1Q5VZK9 1371 aa40.6■■■■■ 4.09
NKX2-5-204ENST00000521848 RIMBP3CA6NJZ7 1639 aa40.57■■■■■ 4.09
NKX2-5-204ENST00000521848 RIMBP3BA6NNM3 1639 aa40.57■■■■■ 4.09
NKX2-5-204ENST00000521848 RIMBP3Q9UFD9 1639 aa40.57■■■■■ 4.09
NKX2-5-204ENST00000521848 CHIC1Q5VXU3 224 aa40.52■■■■■ 4.08
NKX2-5-204ENST00000521848 SHROOM2Q13796 1616 aa40.4■■■■■ 4.06
NKX2-5-204ENST00000521848 EEA1Q15075 1411 aa40.4■■■■■ 4.06
NKX2-5-204ENST00000521848 RAPGEF2Q9Y4G8 1499 aa40.39■■■■■ 4.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms