Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 VTN-203ENST00000542029 501 ntTSL 313.71□□□□□ -0.212e-12■■□□□ 13.2
XRN2Q9H0D6 AL118506.1-201ENST00000601296 3082 ntBASIC13.7□□□□□ -0.229e-6■■□□□ 13.2
XRN2Q9H0D6 DDX56-204ENST00000431640 1554 ntTSL 1 (best) BASIC13.6□□□□□ -0.239e-6■■□□□ 13.2
XRN2Q9H0D6 SGSH-215ENST00000576707 546 ntTSL 413.58□□□□□ -0.249e-6■■□□□ 13.2
XRN2Q9H0D6 PRR4-203ENST00000535024 889 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.249e-6■■□□□ 13.2
XRN2Q9H0D6 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.249e-6■■□□□ 13.2
XRN2Q9H0D6 ABCD4-221ENST00000554453 736 ntTSL 513.36□□□□□ -0.279e-6■■□□□ 13.2
XRN2Q9H0D6 OGG1-218ENST00000602976 4977 nt13.35□□□□□ -0.279e-6■■□□□ 13.2
XRN2Q9H0D6 SSUH2-203ENST00000413305 1874 ntTSL 1 (best)13.35□□□□□ -0.279e-6■■□□□ 13.2
XRN2Q9H0D6 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.289e-6■■□□□ 13.2
XRN2Q9H0D6 ABCD4-206ENST00000470637 853 ntTSL 513.26□□□□□ -0.299e-6■■□□□ 13.2
XRN2Q9H0D6 RPS19-205ENST00000598466 601 ntTSL 213.16□□□□□ -0.39e-6■■□□□ 13.2
XRN2Q9H0D6 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.316e-6■■□□□ 13.2
XRN2Q9H0D6 ZFHX3-205ENST00000563625 455 ntTSL 313.06□□□□□ -0.329e-6■■□□□ 13.2
XRN2Q9H0D6 TMEM63B-210ENST00000534326 1934 ntTSL 212.98□□□□□ -0.339e-6■■□□□ 13.2
XRN2Q9H0D6 PGPEP1-204ENST00000595552 418 ntTSL 212.97□□□□□ -0.339e-6■■□□□ 13.2
XRN2Q9H0D6 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.349e-6■■□□□ 13.2
XRN2Q9H0D6 NUP62-218ENST00000599788 564 ntTSL 412.9□□□□□ -0.349e-6■■□□□ 13.2
XRN2Q9H0D6 ABCD4-227ENST00000557554 523 ntTSL 412.89□□□□□ -0.359e-6■■□□□ 13.2
XRN2Q9H0D6 IL4I1-205ENST00000596011 714 ntTSL 212.78□□□□□ -0.369e-6■■□□□ 13.2
XRN2Q9H0D6 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.399e-6■■□□□ 13.2
XRN2Q9H0D6 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.399e-6■■□□□ 13.2
XRN2Q9H0D6 DDX56-212ENST00000485367 1781 ntTSL 512.6□□□□□ -0.399e-6■■□□□ 13.2
XRN2Q9H0D6 SSUH2-207ENST00000435138 2632 ntTSL 212.59□□□□□ -0.399e-6■■□□□ 13.2
XRN2Q9H0D6 ATP5C1-204ENST00000460820 622 ntTSL 212.56□□□□□ -0.49e-6■■□□□ 13.2
XRN2Q9H0D6 NR1H4-201ENST00000188403 1630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.419e-6■■□□□ 13.2
XRN2Q9H0D6 SSUH2-201ENST00000317371 2561 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.419e-6■■□□□ 13.2
XRN2Q9H0D6 MEF2D-202ENST00000360595 3194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.429e-6■■□□□ 13.2
XRN2Q9H0D6 CSDE1-217ENST00000534699 2667 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.429e-6■■□□□ 13.2
XRN2Q9H0D6 AEN-203ENST00000557927 5039 ntTSL 1 (best)12.42□□□□□ -0.429e-6■■□□□ 13.2
XRN2Q9H0D6 AC011452.1-201ENST00000451973 575 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.439e-6■■□□□ 13.2
XRN2Q9H0D6 TRAPPC12-213ENST00000461577 677 ntTSL 212.36□□□□□ -0.438e-6■■□□□ 13.2
XRN2Q9H0D6 NR1H4-207ENST00000549996 1633 ntTSL 1 (best) BASIC12.3□□□□□ -0.449e-6■■□□□ 13.2
XRN2Q9H0D6 TRAPPC12-204ENST00000415624 815 ntAPPRIS ALT2 TSL 512.28□□□□□ -0.448e-6■■□□□ 13.2
XRN2Q9H0D6 TMEM63B-204ENST00000497371 616 ntTSL 512.23□□□□□ -0.459e-6■■□□□ 13.2
XRN2Q9H0D6 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.479e-6■■□□□ 13.2
XRN2Q9H0D6 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.12□□□□□ -0.479e-6■■□□□ 13.2
XRN2Q9H0D6 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.479e-6■■□□□ 13.2
XRN2Q9H0D6 BZW1-212ENST00000464483 530 ntTSL 211.96□□□□□ -0.499e-6■■□□□ 13.2
XRN2Q9H0D6 ABL1-202ENST00000372348 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.59e-6■■□□□ 13.2
XRN2Q9H0D6 NEK6-212ENST00000539416 2582 ntTSL 2 BASIC11.92□□□□□ -0.59e-6■■□□□ 13.2
XRN2Q9H0D6 NUP62-217ENST00000599567 579 ntTSL 411.9□□□□□ -0.59e-6■■□□□ 13.2
XRN2Q9H0D6 BZW1-204ENST00000410110 1075 ntTSL 511.88□□□□□ -0.519e-6■■□□□ 13.2
XRN2Q9H0D6 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC11.84□□□□□ -0.519e-6■■□□□ 13.2
XRN2Q9H0D6 INSIG2-206ENST00000485520 3185 ntTSL 511.77□□□□□ -0.529e-6■■□□□ 13.2
XRN2Q9H0D6 ABCD4-201ENST00000356924 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.539e-6■■□□□ 13.2
XRN2Q9H0D6 NEK6-205ENST00000394199 2535 ntTSL 2 BASIC11.71□□□□□ -0.539e-6■■□□□ 13.2
XRN2Q9H0D6 DMKN-218ENST00000460327 762 ntTSL 511.66□□□□□ -0.549e-6■■□□□ 13.2
XRN2Q9H0D6 CASP3-201ENST00000308394 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.569e-6■■□□□ 13.2
XRN2Q9H0D6 ERGIC3-210ENST00000451605 520 ntTSL 211.5□□□□□ -0.579e-6■■□□□ 13.2
XRN2Q9H0D6 TRAPPC12-205ENST00000416918 473 ntTSL 311.49□□□□□ -0.578e-6■■□□□ 13.2
XRN2Q9H0D6 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.589e-6■■□□□ 13.2
XRN2Q9H0D6 ABCD4-214ENST00000489678 3008 ntTSL 511.23□□□□□ -0.619e-6■■□□□ 13.2
XRN2Q9H0D6 MYO1C-204ENST00000545534 3676 ntTSL 2 BASIC11.11□□□□□ -0.639e-6■■□□□ 13.2
XRN2Q9H0D6 PGPEP1-202ENST00000269919 7092 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.649e-6■■□□□ 13.2
XRN2Q9H0D6 DMKN-266ENST00000601650 324 ntAPPRIS ALT2 TSL 311.01□□□□□ -0.659e-6■■□□□ 13.2
XRN2Q9H0D6 DDX56-203ENST00000421223 3028 ntTSL 211.01□□□□□ -0.659e-6■■□□□ 13.2
XRN2Q9H0D6 NEDD9-201ENST00000379433 3341 ntTSL 1 (best) BASIC10.99□□□□□ -0.659e-6■■□□□ 13.2
XRN2Q9H0D6 URM1-203ENST00000372853 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.659e-6■■□□□ 13.2
XRN2Q9H0D6 SSUH2-208ENST00000455157 3219 ntTSL 210.9□□□□□ -0.679e-6■■□□□ 13.2
XRN2Q9H0D6 NUP62-203ENST00000593652 905 ntTSL 210.86□□□□□ -0.679e-6■■□□□ 13.2
XRN2Q9H0D6 C19orf54-210ENST00000600139 369 ntTSL 310.79□□□□□ -0.689e-6■■□□□ 13.2
XRN2Q9H0D6 SUZ12P1-206ENST00000582557 1560 ntTSL 1 (best)10.75□□□□□ -0.699e-6■■□□□ 13.2
XRN2Q9H0D6 AC018630.6-201ENST00000536668 1618 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.79e-6■■□□□ 13.2
XRN2Q9H0D6 DDX56-211ENST00000479602 440 ntTSL 210.62□□□□□ -0.719e-6■■□□□ 13.2
XRN2Q9H0D6 NUP62-213ENST00000597814 510 ntTSL 410.6□□□□□ -0.719e-6■■□□□ 13.2
XRN2Q9H0D6 CASP3-206ENST00000523916 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.719e-6■■□□□ 13.2
XRN2Q9H0D6 RPS19-208ENST00000601492 342 ntTSL 510.18□□□□□ -0.789e-6■■□□□ 13.2
XRN2Q9H0D6 MYO1C-214ENST00000574308 403 ntTSL 310.14□□□□□ -0.799e-6■■□□□ 13.2
XRN2Q9H0D6 TRAPPC12-223ENST00000497597 3401 ntTSL 29.86□□□□□ -0.838e-6■■□□□ 13.2
XRN2Q9H0D6 URM1-204ENST00000452446 2944 ntTSL 2 BASIC9.72□□□□□ -0.859e-6■■□□□ 13.2
XRN2Q9H0D6 RNF38-206ENST00000377885 4985 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.869e-6■■□□□ 13.2
XRN2Q9H0D6 NUP62-202ENST00000422090 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.879e-6■■□□□ 13.2
XRN2Q9H0D6 NEK6-215ENST00000546191 2580 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.889e-6■■□□□ 13.2
XRN2Q9H0D6 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.899e-6■■□□□ 13.2
XRN2Q9H0D6 RNF38-209ENST00000491349 959 ntTSL 59.4□□□□□ -0.99e-6■■□□□ 13.2
XRN2Q9H0D6 TRAPPC12-221ENST00000489032 561 ntTSL 39.39□□□□□ -0.918e-6■■□□□ 13.2
XRN2Q9H0D6 TM9SF4-207ENST00000495749 3023 ntTSL 29.11□□□□□ -0.959e-6■■□□□ 13.2
XRN2Q9H0D6 BZW1-210ENST00000460660 265 ntTSL 1 (best)9.02□□□□□ -0.979e-6■■□□□ 13.2
XRN2Q9H0D6 URM1-202ENST00000372850 3045 ntTSL 1 (best) BASIC8.93□□□□□ -0.989e-6■■□□□ 13.2
XRN2Q9H0D6 NR1H4-209ENST00000551379 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.999e-6■■□□□ 13.2
XRN2Q9H0D6 INSIG2-204ENST00000471186 2100 ntTSL 58.66□□□□□ -1.029e-6■■□□□ 13.2
XRN2Q9H0D6 BZW1-207ENST00000450637 578 ntTSL 48.66□□□□□ -1.029e-6■■□□□ 13.2
XRN2Q9H0D6 NUP62-210ENST00000596680 473 ntTSL 28.65□□□□□ -1.029e-6■■□□□ 13.2
XRN2Q9H0D6 ABHD12-205ENST00000465694 474 ntTSL 28.5□□□□□ -1.059e-6■■□□□ 13.2
XRN2Q9H0D6 SMAD3-212ENST00000559937 579 ntTSL 48.23□□□□□ -1.099e-6■■□□□ 13.2
XRN2Q9H0D6 PSAP-206ENST00000633965 500 ntTSL 58.13□□□□□ -1.119e-6■■□□□ 13.2
XRN2Q9H0D6 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.139e-6■■□□□ 13.2
XRN2Q9H0D6 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.139e-6■■□□□ 13.2
XRN2Q9H0D6 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.77□□□□□ -1.179e-6■■□□□ 13.2
XRN2Q9H0D6 NEDD9-204ENST00000448183 4934 ntTSL 1 (best)7.74□□□□□ -1.179e-6■■□□□ 13.2
XRN2Q9H0D6 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC7.63□□□□□ -1.199e-6■■□□□ 13.2
XRN2Q9H0D6 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.229e-6■■□□□ 13.2
XRN2Q9H0D6 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.43□□□□□ -1.229e-6■■□□□ 13.2
XRN2Q9H0D6 UBE2V1-215ENST00000473860 639 ntTSL 37.41□□□□□ -1.229e-6■■□□□ 13.2
XRN2Q9H0D6 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.269e-6■■□□□ 13.2
XRN2Q9H0D6 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.269e-6■■□□□ 13.2
XRN2Q9H0D6 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.87□□□□□ -1.319e-6■■□□□ 13.2
XRN2Q9H0D6 TRAPPC12-208ENST00000437733 518 ntTSL 56.7□□□□□ -1.348e-6■■□□□ 13.2
XRN2Q9H0D6 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.67□□□□□ -1.349e-6■■□□□ 13.2
Retrieved 100 of 21,068 protein–RNA pairs in 149.8 ms