RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 NISCHQ9Y2I1 1504 aa24.24■■□□□ 1.47
CASP3-201ENST00000308394 CCDC180Q9P1Z9 1646 aa21.12■□□□□ 0.97
CASP3-201ENST00000308394 ZCCHC6Q5VYS8 1495 aaKnown RBP20.32■□□□□ 0.84
CASP3-201ENST00000308394 DCAF8L2P0C7V8 631 aa20.25■□□□□ 0.83
CASP3-201ENST00000308394 ABCC9O60706 1549 aa20.2■□□□□ 0.82
CASP3-201ENST00000308394 DCAF1Q9Y4B6 1507 aa19.98■□□□□ 0.79
CASP3-201ENST00000308394 SHROOM4Q9ULL8 1493 aa19.83■□□□□ 0.76
CASP3-201ENST00000308394 MYO15BQ96JP2 1530 aa19.78■□□□□ 0.76
CASP3-201ENST00000308394 NACADO15069 1562 aa19.74■□□□□ 0.75
CASP3-201ENST00000308394 RB1CC1Q8TDY2 1594 aa19.61■□□□□ 0.73
CASP3-201ENST00000308394 SCRIBQ14160 1630 aa19.5■□□□□ 0.71
CASP3-201ENST00000308394 UNC13AQ9UPW8 1703 aa19.16■□□□□ 0.66
CASP3-201ENST00000308394 PABPN1Q86U42 306 aaKnown RBP eCLIP19.08■□□□□ 0.64
CASP3-201ENST00000308394 SUPT5HO00267 1087 aaKnown RBP19.05■□□□□ 0.64
CASP3-201ENST00000308394 BICRAQ9NZM4 1560 aa19■□□□□ 0.63
CASP3-201ENST00000308394 CECR2Q9BXF3 1484 aa18.88■□□□□ 0.61
CASP3-201ENST00000308394 RSF1Q96T23 1441 aaPredicted RBP18.79■□□□□ 0.6
CASP3-201ENST00000308394 MROH2BQ7Z745 1585 aa18.74■□□□□ 0.59
CASP3-201ENST00000308394 BAZ1AQ9NRL2 1556 aaPredicted RBP18.73■□□□□ 0.59
CASP3-201ENST00000308394 SMARCA4P51532 1647 aa18.64■□□□□ 0.57
CASP3-201ENST00000308394 WIZO95785 1651 aa18.58■□□□□ 0.56
CASP3-201ENST00000308394 SLC24A1O60721 1099 aa18.55■□□□□ 0.56
CASP3-201ENST00000308394 EIF4G1Q04637 1599 aaKnown RBP18.46■□□□□ 0.55
CASP3-201ENST00000308394 ATAD2BQ9ULI0 1458 aa18.39■□□□□ 0.53
CASP3-201ENST00000308394 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
CASP3-201ENST00000308394 SMARCA2P51531 1590 aa18.36■□□□□ 0.53
CASP3-201ENST00000308394 TOP2AP11388 1531 aaKnown RBP18.35■□□□□ 0.53
CASP3-201ENST00000308394 BAZ1BQ9UIG0 1483 aaKnown RBP18.3■□□□□ 0.52
CASP3-201ENST00000308394 NCAPD3P42695 1498 aa18.23■□□□□ 0.51
CASP3-201ENST00000308394 CC2D2AQ9P2K1 1620 aa18.23■□□□□ 0.51
CASP3-201ENST00000308394 CCDC88BA6NC98 1476 aa18.21■□□□□ 0.51
CASP3-201ENST00000308394 HMGXB3Q12766 1538 aa18.17■□□□□ 0.5
CASP3-201ENST00000308394 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
CASP3-201ENST00000308394 MYT1Q01538 1121 aa17.95■□□□□ 0.46
CASP3-201ENST00000308394 DNAJC5BQ9UF47 199 aa17.93■□□□□ 0.46
CASP3-201ENST00000308394 TRIM41Q8WV44 630 aa17.9■□□□□ 0.46
CASP3-201ENST00000308394 PELP1Q8IZL8 1130 aaKnown RBP17.89■□□□□ 0.45
CASP3-201ENST00000308394 CFTRP13569 1480 aa17.81■□□□□ 0.44
CASP3-201ENST00000308394 ABCC8Q09428 1581 aa17.81■□□□□ 0.44
CASP3-201ENST00000308394 CADPSQ9ULU8 1353 aa17.8■□□□□ 0.44
CASP3-201ENST00000308394 WRNQ14191 1432 aaPredicted RBP eCLIP17.7■□□□□ 0.42
CASP3-201ENST00000308394 NESP48681 1621 aa17.68■□□□□ 0.42
CASP3-201ENST00000308394 PRDM2Q13029 1718 aa17.63■□□□□ 0.41
CASP3-201ENST00000308394 LAMC3Q9Y6N6 1575 aa17.62■□□□□ 0.41
CASP3-201ENST00000308394 TTBK1Q5TCY1 1321 aaPredicted RBP17.61■□□□□ 0.41
CASP3-201ENST00000308394 FAM9AQ8IZU1 332 aaPredicted RBP17.61■□□□□ 0.41
CASP3-201ENST00000308394 SYNJ1O43426 1573 aa17.6■□□□□ 0.41
CASP3-201ENST00000308394 FANCD2Q9BXW9 1451 aa17.6■□□□□ 0.41
CASP3-201ENST00000308394 PRKCSHP14314 528 aaPredicted RBP17.56■□□□□ 0.4
CASP3-201ENST00000308394 PDS5BQ9NTI5 1447 aa17.54■□□□□ 0.4
CASP3-201ENST00000308394 TOP2BQ02880 1626 aa17.52■□□□□ 0.4
CASP3-201ENST00000308394 CUX1P39880 1505 aa17.52■□□□□ 0.39
CASP3-201ENST00000308394 CEP164Q9UPV0 1460 aa17.49■□□□□ 0.39
CASP3-201ENST00000308394 BIVM-ERCC5R4GMW8 1640 aa17.48■□□□□ 0.39
CASP3-201ENST00000308394 LOC105371045A0A1W2PR82 267 aa17.47■□□□□ 0.39
CASP3-201ENST00000308394 SOGA1O94964 1423 aa17.46■□□□□ 0.39
CASP3-201ENST00000308394 KIF21AQ7Z4S6 1674 aa17.42■□□□□ 0.38
CASP3-201ENST00000308394 EHMT2Q96KQ7 1210 aa17.42■□□□□ 0.38
CASP3-201ENST00000308394 RUSC2Q8N2Y8 1516 aa17.4■□□□□ 0.38
CASP3-201ENST00000308394 DNMBPQ6XZF7 1577 aa17.38■□□□□ 0.37
CASP3-201ENST00000308394 TOPBP1Q92547 1522 aa17.38■□□□□ 0.37
CASP3-201ENST00000308394 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
CASP3-201ENST00000308394 URB2Q14146 1524 aaKnown RBP17.36■□□□□ 0.37
CASP3-201ENST00000308394 EEA1Q15075 1411 aa17.36■□□□□ 0.37
CASP3-201ENST00000308394 CSRNP3Q8WYN3 585 aa17.35■□□□□ 0.37
CASP3-201ENST00000308394 ERCC6Q03468 1493 aa17.34■□□□□ 0.37
CASP3-201ENST00000308394 POLA1P09884 1462 aaPredicted RBP17.29■□□□□ 0.36
CASP3-201ENST00000308394 MRC2Q9UBG0 1479 aa17.29■□□□□ 0.36
CASP3-201ENST00000308394 APLP2Q06481 763 aa17.27■□□□□ 0.35
CASP3-201ENST00000308394 KIF27Q86VH2 1401 aa17.27■□□□□ 0.35
CASP3-201ENST00000308394 RAD54L2Q9Y4B4 1467 aa17.27■□□□□ 0.35
CASP3-201ENST00000308394 CUX2O14529 1486 aa17.25■□□□□ 0.35
CASP3-201ENST00000308394 DAXXQ9UER7 740 aaPredicted RBP17.25■□□□□ 0.35
CASP3-201ENST00000308394 ABCA10Q8WWZ4 1543 aa17.18■□□□□ 0.34
CASP3-201ENST00000308394 WDR62O43379 1518 aa17.18■□□□□ 0.34
CASP3-201ENST00000308394 UBTFP17480 764 aaKnown RBP17.18■□□□□ 0.34
CASP3-201ENST00000308394 ERICH6Q7L0X2 663 aa17.15■□□□□ 0.34
CASP3-201ENST00000308394 GOLGA3Q08378 1498 aa17.14■□□□□ 0.33
CASP3-201ENST00000308394 THOC2Q8NI27 1593 aaKnown RBP17.14■□□□□ 0.33
CASP3-201ENST00000308394 TDRD9Q8NDG6 1382 aaKnown RBP17.14■□□□□ 0.33
CASP3-201ENST00000308394 IGF1RP08069 1367 aa17.13■□□□□ 0.33
CASP3-201ENST00000308394 KIF21BO75037 1637 aa17.11■□□□□ 0.33
CASP3-201ENST00000308394 RAPGEF2Q9Y4G8 1499 aa17.1■□□□□ 0.33
CASP3-201ENST00000308394 TARBP1Q13395 1621 aaKnown RBP17.09■□□□□ 0.33
CASP3-201ENST00000308394 PRXQ9BXM0 1461 aa17.09■□□□□ 0.33
CASP3-201ENST00000308394 WDR97A6NE52 1622 aa17.08■□□□□ 0.33
CASP3-201ENST00000308394 IFT140Q96RY7 1462 aa17.07■□□□□ 0.32
CASP3-201ENST00000308394 TNIKQ9UKE5 1360 aa17.06■□□□□ 0.32
CASP3-201ENST00000308394 GAPVD1Q14C86 1478 aa17.06■□□□□ 0.32
CASP3-201ENST00000308394 CARMIL1Q5VZK9 1371 aa17.05■□□□□ 0.32
CASP3-201ENST00000308394 AQRO60306 1485 aaKnown RBP eCLIP17.03■□□□□ 0.32
CASP3-201ENST00000308394 ERICH3Q5RHP9 1530 aa17.03■□□□□ 0.32
CASP3-201ENST00000308394 ABCA5Q8WWZ7 1642 aa17.02■□□□□ 0.32
CASP3-201ENST00000308394 ZNF608Q9ULD9 1512 aaPredicted RBP17■□□□□ 0.31
CASP3-201ENST00000308394 RANGAP1P46060 587 aaPredicted RBP16.98■□□□□ 0.31
CASP3-201ENST00000308394 CEP162Q5TB80 1403 aa16.98■□□□□ 0.31
CASP3-201ENST00000308394 CUL7Q14999 1698 aa16.94■□□□□ 0.3
CASP3-201ENST00000308394 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
CASP3-201ENST00000308394 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
CASP3-201ENST00000308394 EIF4G3O43432 1585 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms