RNA–Protein interactions for RNA: ENST00000377885.6

RNF38-206, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-206ENST00000377885 NISCHQ9Y2I1 1504 aa18.82■□□□□ 0.6
RNF38-206ENST00000377885 SUPT5HO00267 1087 aaKnown RBP16.75■□□□□ 0.27
RNF38-206ENST00000377885 SHROOM4Q9ULL8 1493 aa16.75■□□□□ 0.27
RNF38-206ENST00000377885 HRCP23327 699 aa16.4■□□□□ 0.22
RNF38-206ENST00000377885 PCGF6Q9BYE7 350 aa16.3■□□□□ 0.2
RNF38-206ENST00000377885 DCAF8L2P0C7V8 631 aa16.3■□□□□ 0.2
RNF38-206ENST00000377885 CHIC1Q5VXU3 224 aa16.16■□□□□ 0.18
RNF38-206ENST00000377885 PPARGC1BQ86YN6 1023 aaKnown RBP15.94■□□□□ 0.14
RNF38-206ENST00000377885 ZCCHC6Q5VYS8 1495 aaKnown RBP15.93■□□□□ 0.14
RNF38-206ENST00000377885 PELP1Q8IZL8 1130 aaKnown RBP15.9■□□□□ 0.14
RNF38-206ENST00000377885 ZEB1P37275 1124 aaPredicted RBP15.89■□□□□ 0.13
RNF38-206ENST00000377885 MYO15BQ96JP2 1530 aa15.88■□□□□ 0.13
RNF38-206ENST00000377885 TRIM26Q12899 539 aaPredicted RBP15.87■□□□□ 0.13
RNF38-206ENST00000377885 DCAF1Q9Y4B6 1507 aa15.79■□□□□ 0.12
RNF38-206ENST00000377885 CCDC180Q9P1Z9 1646 aa15.79■□□□□ 0.12
RNF38-206ENST00000377885 LOC105371045A0A1W2PR82 267 aa15.77■□□□□ 0.11
RNF38-206ENST00000377885 TRIM41Q8WV44 630 aa15.58■□□□□ 0.08
RNF38-206ENST00000377885 FAM9AQ8IZU1 332 aaPredicted RBP15.53■□□□□ 0.08
RNF38-206ENST00000377885 ABCC9O60706 1549 aa15.5■□□□□ 0.07
RNF38-206ENST00000377885 EHMT2Q96KQ7 1210 aa15.48■□□□□ 0.07
RNF38-206ENST00000377885 CENPBP07199 599 aaPredicted RBP15.39■□□□□ 0.05
RNF38-206ENST00000377885 MYT1Q01538 1121 aa15.37■□□□□ 0.05
RNF38-206ENST00000377885 CCER1Q8TC90 406 aaPredicted RBP15.36■□□□□ 0.05
RNF38-206ENST00000377885 SCAF1Q9H7N4 1312 aaKnown RBP15.27■□□□□ 0.04
RNF38-206ENST00000377885 ACIN1Q9UKV3 1341 aaKnown RBP15.17■□□□□ 0.02
RNF38-206ENST00000377885 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.15■□□□□ 0.02
RNF38-206ENST00000377885 DIEXFQ68CQ4 756 aaKnown RBP15.13■□□□□ 0.01
RNF38-206ENST00000377885 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
RNF38-206ENST00000377885 TTBK1Q5TCY1 1321 aaPredicted RBP15.09■□□□□ 0.01
RNF38-206ENST00000377885 GTF3C3Q9Y5Q9 886 aa15.07■□□□□ 0
RNF38-206ENST00000377885 NEUROD1Q13562 356 aa15.01□□□□□ -0.01
RNF38-206ENST00000377885 SCRIBQ14160 1630 aa15.01□□□□□ -0.01
RNF38-206ENST00000377885 RB1CC1Q8TDY2 1594 aa14.97□□□□□ -0.01
RNF38-206ENST00000377885 YTHDC1Q96MU7 727 aaKnown RBP14.96□□□□□ -0.01
RNF38-206ENST00000377885 NACADO15069 1562 aa14.92□□□□□ -0.02
RNF38-206ENST00000377885 UBTFP17480 764 aaKnown RBP14.91□□□□□ -0.02
RNF38-206ENST00000377885 APLP2Q06481 763 aa14.9□□□□□ -0.02
RNF38-206ENST00000377885 ZNF316A6NFI3 1004 aaPredicted RBP14.88□□□□□ -0.03
RNF38-206ENST00000377885 HNRNPUL2Q1KMD3 747 aaKnown RBP14.73□□□□□ -0.05
RNF38-206ENST00000377885 PABPN1Q86U42 306 aaKnown RBP eCLIP14.71□□□□□ -0.05
RNF38-206ENST00000377885 CEP162Q5TB80 1403 aa14.67□□□□□ -0.06
RNF38-206ENST00000377885 CSRNP3Q8WYN3 585 aa14.67□□□□□ -0.06
RNF38-206ENST00000377885 CECR2Q9BXF3 1484 aa14.66□□□□□ -0.06
RNF38-206ENST00000377885 MROH2BQ7Z745 1585 aa14.63□□□□□ -0.07
RNF38-206ENST00000377885 TNIKQ9UKE5 1360 aa14.62□□□□□ -0.07
RNF38-206ENST00000377885 WRNQ14191 1432 aaPredicted RBP eCLIP14.61□□□□□ -0.07
RNF38-206ENST00000377885 MIER1Q8N108 512 aa14.6□□□□□ -0.07
RNF38-206ENST00000377885 CLSPNQ9HAW4 1339 aa14.6□□□□□ -0.07
RNF38-206ENST00000377885 EEA1Q15075 1411 aa14.6□□□□□ -0.07
RNF38-206ENST00000377885 RANGAP1P46060 587 aaPredicted RBP14.58□□□□□ -0.08
RNF38-206ENST00000377885 WIZO95785 1651 aa14.54□□□□□ -0.08
RNF38-206ENST00000377885 BAZ1AQ9NRL2 1556 aaPredicted RBP14.52□□□□□ -0.09
RNF38-206ENST00000377885 GOLGA3Q08378 1498 aa14.51□□□□□ -0.09
RNF38-206ENST00000377885 CCDC88BA6NC98 1476 aa14.47□□□□□ -0.09
RNF38-206ENST00000377885 SOGA1O94964 1423 aa14.45□□□□□ -0.1
RNF38-206ENST00000377885 ABCC8Q09428 1581 aa14.45□□□□□ -0.1
RNF38-206ENST00000377885 NEFLP07196 543 aa14.43□□□□□ -0.1
RNF38-206ENST00000377885 CLIP1P30622 1438 aa14.42□□□□□ -0.1
RNF38-206ENST00000377885 TOP2AP11388 1531 aaKnown RBP14.39□□□□□ -0.11
RNF38-206ENST00000377885 CEP164Q9UPV0 1460 aa14.38□□□□□ -0.11
RNF38-206ENST00000377885 SUPT16HQ9Y5B9 1047 aaKnown RBP14.31□□□□□ -0.12
RNF38-206ENST00000377885 ITGAEP38570 1179 aa14.3□□□□□ -0.12
RNF38-206ENST00000377885 VPS8Q8N3P4 1428 aa14.29□□□□□ -0.12
RNF38-206ENST00000377885 ERICH6Q7L0X2 663 aa14.26□□□□□ -0.13
RNF38-206ENST00000377885 RUSC2Q8N2Y8 1516 aa14.25□□□□□ -0.13
RNF38-206ENST00000377885 BCANQ96GW7 911 aa14.24□□□□□ -0.13
RNF38-206ENST00000377885 SMARCA2P51531 1590 aa14.24□□□□□ -0.13
RNF38-206ENST00000377885 ANP32EQ9BTT0 268 aa14.23□□□□□ -0.13
RNF38-206ENST00000377885 SMARCA4P51532 1647 aa14.23□□□□□ -0.13
RNF38-206ENST00000377885 EIF4G1Q04637 1599 aaKnown RBP14.21□□□□□ -0.13
RNF38-206ENST00000377885 UNC13AQ9UPW8 1703 aa14.2□□□□□ -0.14
RNF38-206ENST00000377885 BICRAQ9NZM4 1560 aa14.17□□□□□ -0.14
RNF38-206ENST00000377885 FKBP8Q14318 412 aa14.17□□□□□ -0.14
RNF38-206ENST00000377885 BAZ1BQ9UIG0 1483 aaKnown RBP14.17□□□□□ -0.14
RNF38-206ENST00000377885 TSHZ2Q9NRE2 1034 aa14.14□□□□□ -0.15
RNF38-206ENST00000377885 ANP32CO43423 234 aa14.13□□□□□ -0.15
RNF38-206ENST00000377885 DHX57Q6P158 1386 aaKnown RBP14.13□□□□□ -0.15
RNF38-206ENST00000377885 KIF21BO75037 1637 aa14.13□□□□□ -0.15
RNF38-206ENST00000377885 ATP1B4Q9UN42 357 aaPredicted RBP14.12□□□□□ -0.15
RNF38-206ENST00000377885 DDX10Q13206 875 aaKnown RBP14.09□□□□□ -0.15
RNF38-206ENST00000377885 RAPGEF2Q9Y4G8 1499 aa14.08□□□□□ -0.16
RNF38-206ENST00000377885 FAM50AQ14320 339 aaKnown RBP14.08□□□□□ -0.16
RNF38-206ENST00000377885 CCNB3Q8WWL7 1395 aa14.04□□□□□ -0.16
RNF38-206ENST00000377885 CDK11AQ9UQ88 783 aaPredicted RBP14.02□□□□□ -0.16
RNF38-206ENST00000377885 KANK4Q5T7N3 995 aaPredicted RBP14.02□□□□□ -0.17
RNF38-206ENST00000377885 SYNJ1O43426 1573 aa13.98□□□□□ -0.17
RNF38-206ENST00000377885 TRIM52Q96A61 297 aa13.98□□□□□ -0.17
RNF38-206ENST00000377885 BCL11AQ9H165 835 aa13.97□□□□□ -0.17
RNF38-206ENST00000377885 KIF27Q86VH2 1401 aa13.96□□□□□ -0.18
RNF38-206ENST00000377885 CCER2I3L3R5 266 aa13.93□□□□□ -0.18
RNF38-206ENST00000377885 TIMELESSQ9UNS1 1208 aa13.93□□□□□ -0.18
RNF38-206ENST00000377885 RBM19Q9Y4C8 960 aaKnown RBP13.93□□□□□ -0.18
RNF38-206ENST00000377885 RAB3GAP2Q9H2M9 1393 aa13.93□□□□□ -0.18
RNF38-206ENST00000377885 TONSLQ96HA7 1378 aa13.92□□□□□ -0.18
RNF38-206ENST00000377885 SETD5Q9C0A6 1442 aa13.91□□□□□ -0.18
RNF38-206ENST00000377885 RRBP1Q9P2E9 1410 aaKnown RBP13.91□□□□□ -0.18
RNF38-206ENST00000377885 KCNH8Q96L42 1107 aa13.91□□□□□ -0.18
RNF38-206ENST00000377885 ERICH3Q5RHP9 1530 aa13.88□□□□□ -0.19
RNF38-206ENST00000377885 SIN3AQ96ST3 1273 aa13.88□□□□□ -0.19
RNF38-206ENST00000377885 MYT1LQ9UL68 1186 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms