RNA–Protein interactions for RNA: ENST00000460820.6

ATP5C1-204, Transcript of ATP synthase subunit gamma, mitochondrial, humanhuman

TSL 2

Gene ATP5C1, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5C1-204ENST00000460820 AEBP2Q6ZN18 517 aaPredicted RBP33.04■■■□□ 2.88
ATP5C1-204ENST00000460820 CHIC1Q5VXU3 224 aa31.45■■■□□ 2.63
ATP5C1-204ENST00000460820 SENP3Q9H4L4 574 aaPredicted RBP28.27■■■□□ 2.12
ATP5C1-204ENST00000460820 PHF23Q9BUL5 403 aaPredicted RBP27.89■■■□□ 2.06
ATP5C1-204ENST00000460820 NISCHQ9Y2I1 1504 aa26.57■■□□□ 1.84
ATP5C1-204ENST00000460820 FOXD1Q16676 465 aa26.3■■□□□ 1.8
ATP5C1-204ENST00000460820 PLPPR3Q6T4P5 718 aa25.18■■□□□ 1.62
ATP5C1-204ENST00000460820 MSH5O43196 834 aa24.66■■□□□ 1.54
ATP5C1-204ENST00000460820 PIAS4Q8N2W9 510 aaPredicted RBP24.62■■□□□ 1.53
ATP5C1-204ENST00000460820 PPP6R1Q9UPN7 881 aa24.59■■□□□ 1.53
ATP5C1-204ENST00000460820 ADRA2BP18089 450 aa24.54■■□□□ 1.52
ATP5C1-204ENST00000460820 POTEDQ86YR6 584 aa23.98■■□□□ 1.43
ATP5C1-204ENST00000460820 CCDC180Q9P1Z9 1646 aa23.26■■□□□ 1.31
ATP5C1-204ENST00000460820 SCAF1Q9H7N4 1312 aaKnown RBP22.55■■□□□ 1.2
ATP5C1-204ENST00000460820 MAPK8IP2Q13387 824 aaPredicted RBP22.52■■□□□ 1.2
ATP5C1-204ENST00000460820 DMRT2Q9Y5R5 561 aa22.39■■□□□ 1.17
ATP5C1-204ENST00000460820 ZCCHC6Q5VYS8 1495 aaKnown RBP22.32■■□□□ 1.16
ATP5C1-204ENST00000460820 ABCC9O60706 1549 aa22.15■■□□□ 1.14
ATP5C1-204ENST00000460820 DCAF1Q9Y4B6 1507 aa22.08■■□□□ 1.13
ATP5C1-204ENST00000460820 PPP4R3CPQ6ZMV5 832 aa22.06■■□□□ 1.12
ATP5C1-204ENST00000460820 DCAF8L2P0C7V8 631 aa21.86■■□□□ 1.09
ATP5C1-204ENST00000460820 MYO15BQ96JP2 1530 aa21.84■■□□□ 1.09
ATP5C1-204ENST00000460820 NACADO15069 1562 aa21.66■■□□□ 1.06
ATP5C1-204ENST00000460820 CNKSR2Q8WXI2 1034 aa21.66■■□□□ 1.06
ATP5C1-204ENST00000460820 HOXD11P31277 338 aaPredicted RBP21.57■■□□□ 1.04
ATP5C1-204ENST00000460820 DCAF8L1A6NGE4 600 aa21.55■■□□□ 1.04
ATP5C1-204ENST00000460820 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.03
ATP5C1-204ENST00000460820 RB1CC1Q8TDY2 1594 aa21.51■■□□□ 1.03
ATP5C1-204ENST00000460820 RNF216Q9NWF9 866 aaPredicted RBP21.45■■□□□ 1.02
ATP5C1-204ENST00000460820 NCBP3Q53F19 620 aaKnown RBP21.28■■□□□ 1
ATP5C1-204ENST00000460820 SCRIBQ14160 1630 aa21.23■□□□□ 0.99
ATP5C1-204ENST00000460820 CACNB1Q02641 598 aaPredicted RBP21.16■□□□□ 0.98
ATP5C1-204ENST00000460820 RNF39Q9H2S5 420 aa21■□□□□ 0.95
ATP5C1-204ENST00000460820 UNC13AQ9UPW8 1703 aa20.98■□□□□ 0.95
ATP5C1-204ENST00000460820 NPM3O75607 178 aaKnown RBP20.89■□□□□ 0.93
ATP5C1-204ENST00000460820 BICRAQ9NZM4 1560 aa20.86■□□□□ 0.93
ATP5C1-204ENST00000460820 DNAJC5BQ9UF47 199 aa20.84■□□□□ 0.93
ATP5C1-204ENST00000460820 PABPN1Q86U42 306 aaKnown RBP eCLIP20.79■□□□□ 0.92
ATP5C1-204ENST00000460820 SUPT5HO00267 1087 aaKnown RBP20.78■□□□□ 0.92
ATP5C1-204ENST00000460820 C1QBPQ07021 282 aaKnown RBP20.74■□□□□ 0.91
ATP5C1-204ENST00000460820 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.62■□□□□ 0.891e-10■□□□□ 10.9
ATP5C1-204ENST00000460820 RSF1Q96T23 1441 aaPredicted RBP20.57■□□□□ 0.88
ATP5C1-204ENST00000460820 BAZ1AQ9NRL2 1556 aaPredicted RBP20.57■□□□□ 0.88
ATP5C1-204ENST00000460820 CECR2Q9BXF3 1484 aa20.53■□□□□ 0.88
ATP5C1-204ENST00000460820 KCNA4P22459 653 aa20.51■□□□□ 0.87
ATP5C1-204ENST00000460820 MROH2BQ7Z745 1585 aa20.45■□□□□ 0.86
ATP5C1-204ENST00000460820 SMARCA4P51532 1647 aa20.42■□□□□ 0.86
ATP5C1-204ENST00000460820 WIZO95785 1651 aa20.29■□□□□ 0.84
ATP5C1-204ENST00000460820 EIF4G1Q04637 1599 aaKnown RBP20.25■□□□□ 0.83
ATP5C1-204ENST00000460820 PEG3Q9GZU2 1588 aa20.22■□□□□ 0.83
ATP5C1-204ENST00000460820 TOP2AP11388 1531 aaKnown RBP20.17■□□□□ 0.82
ATP5C1-204ENST00000460820 SMARCA2P51531 1590 aa20.15■□□□□ 0.82
ATP5C1-204ENST00000460820 U3KPZ7 1027 aaPredicted RBP20.11■□□□□ 0.81
ATP5C1-204ENST00000460820 ATAD2BQ9ULI0 1458 aa20.07■□□□□ 0.8
ATP5C1-204ENST00000460820 CC2D2AQ9P2K1 1620 aa20.04■□□□□ 0.8
ATP5C1-204ENST00000460820 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
ATP5C1-204ENST00000460820 NCAPD3P42695 1498 aa19.96■□□□□ 0.79
ATP5C1-204ENST00000460820 HMGXB3Q12766 1538 aa19.94■□□□□ 0.78
ATP5C1-204ENST00000460820 SLC4A2P04920 1241 aa19.92■□□□□ 0.78
ATP5C1-204ENST00000460820 CCDC88BA6NC98 1476 aa19.91■□□□□ 0.78
ATP5C1-204ENST00000460820 CAPN15O75808 1086 aa19.85■□□□□ 0.77
ATP5C1-204ENST00000460820 SPINK5Q9NQ38 1064 aaPredicted RBP19.83■□□□□ 0.77
ATP5C1-204ENST00000460820 DSG3P32926 999 aa19.68■□□□□ 0.74
ATP5C1-204ENST00000460820 APLP2Q06481 763 aa19.67■□□□□ 0.74
ATP5C1-204ENST00000460820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.65■□□□□ 0.74
ATP5C1-204ENST00000460820 HNRNPUL2Q1KMD3 747 aaKnown RBP19.65■□□□□ 0.74
ATP5C1-204ENST00000460820 TRIM41Q8WV44 630 aa19.64■□□□□ 0.73
ATP5C1-204ENST00000460820 TRHP20396 242 aaPredicted RBP19.54■□□□□ 0.72
ATP5C1-204ENST00000460820 SAMD1Q6SPF0 538 aaPredicted RBP19.52■□□□□ 0.72
ATP5C1-204ENST00000460820 ZNF219Q9P2Y4 722 aaPredicted RBP19.5■□□□□ 0.71
ATP5C1-204ENST00000460820 CFTRP13569 1480 aa19.48■□□□□ 0.71
ATP5C1-204ENST00000460820 PRDM2Q13029 1718 aa19.46■□□□□ 0.71
ATP5C1-204ENST00000460820 CADPSQ9ULU8 1353 aa19.43■□□□□ 0.7
ATP5C1-204ENST00000460820 ABCC8Q09428 1581 aa19.42■□□□□ 0.7
ATP5C1-204ENST00000460820 WRNQ14191 1432 aaPredicted RBP eCLIP19.41■□□□□ 0.7
ATP5C1-204ENST00000460820 SLC4A1APQ9BWU0 796 aaKnown RBP19.4■□□□□ 0.7
ATP5C1-204ENST00000460820 ABCB7O75027 752 aa19.36■□□□□ 0.69
ATP5C1-204ENST00000460820 MYCNP04198 464 aaPredicted RBP19.35■□□□□ 0.69
ATP5C1-204ENST00000460820 NESP48681 1621 aa19.32■□□□□ 0.68
ATP5C1-204ENST00000460820 LAMC3Q9Y6N6 1575 aa19.32■□□□□ 0.68
ATP5C1-204ENST00000460820 TOP2BQ02880 1626 aa19.27■□□□□ 0.68
ATP5C1-204ENST00000460820 EEA1Q15075 1411 aa19.26■□□□□ 0.67
ATP5C1-204ENST00000460820 SYNJ1O43426 1573 aa19.26■□□□□ 0.67
ATP5C1-204ENST00000460820 BIVM-ERCC5R4GMW8 1640 aa19.25■□□□□ 0.67
ATP5C1-204ENST00000460820 PDS5BQ9NTI5 1447 aa19.18■□□□□ 0.66
ATP5C1-204ENST00000460820 FANCD2Q9BXW9 1451 aa19.18■□□□□ 0.66
ATP5C1-204ENST00000460820 FOXD4L1Q9NU39 408 aa19.16■□□□□ 0.66
ATP5C1-204ENST00000460820 FAM9AQ8IZU1 332 aaPredicted RBP19.14■□□□□ 0.65
ATP5C1-204ENST00000460820 CUX1P39880 1505 aa19.14■□□□□ 0.65
ATP5C1-204ENST00000460820 CEP164Q9UPV0 1460 aa19.09■□□□□ 0.65
ATP5C1-204ENST00000460820 LOC105371045A0A1W2PR82 267 aa19.08■□□□□ 0.64
ATP5C1-204ENST00000460820 SOGA1O94964 1423 aa19.08■□□□□ 0.64
ATP5C1-204ENST00000460820 KIF21AQ7Z4S6 1674 aa19.06■□□□□ 0.64
ATP5C1-204ENST00000460820 CSRNP3Q8WYN3 585 aa19.05■□□□□ 0.64
ATP5C1-204ENST00000460820 DNMBPQ6XZF7 1577 aa19.05■□□□□ 0.64
ATP5C1-204ENST00000460820 ERCC6Q03468 1493 aa19.03■□□□□ 0.64
ATP5C1-204ENST00000460820 POLA2Q14181 598 aa19.01■□□□□ 0.63
ATP5C1-204ENST00000460820 MRC2Q9UBG0 1479 aa18.97■□□□□ 0.63
ATP5C1-204ENST00000460820 TOPBP1Q92547 1522 aa18.97■□□□□ 0.63
ATP5C1-204ENST00000460820 KIF27Q86VH2 1401 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms