RNA–Protein interactions for RNA: ENST00000416918.5

TRAPPC12-205, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-205ENST00000416918 NISCHQ9Y2I1 1504 aa24.25■■□□□ 1.47
TRAPPC12-205ENST00000416918 CCDC180Q9P1Z9 1646 aa21.06■□□□□ 0.96
TRAPPC12-205ENST00000416918 ZCCHC6Q5VYS8 1495 aaKnown RBP20.41■□□□□ 0.86
TRAPPC12-205ENST00000416918 DCAF1Q9Y4B6 1507 aa20.21■□□□□ 0.83
TRAPPC12-205ENST00000416918 MYO15BQ96JP2 1530 aa19.93■□□□□ 0.78
TRAPPC12-205ENST00000416918 DCAF8L2P0C7V8 631 aa19.85■□□□□ 0.77
TRAPPC12-205ENST00000416918 SHROOM4Q9ULL8 1493 aa19.72■□□□□ 0.75
TRAPPC12-205ENST00000416918 NACADO15069 1562 aa19.63■□□□□ 0.73
TRAPPC12-205ENST00000416918 ABCC9O60706 1549 aa19.52■□□□□ 0.72
TRAPPC12-205ENST00000416918 RB1CC1Q8TDY2 1594 aa19.35■□□□□ 0.69
TRAPPC12-205ENST00000416918 SUPT5HO00267 1087 aaKnown RBP19.22■□□□□ 0.67
TRAPPC12-205ENST00000416918 SCRIBQ14160 1630 aa19.2■□□□□ 0.66
TRAPPC12-205ENST00000416918 RSF1Q96T23 1441 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC12-205ENST00000416918 BAZ1AQ9NRL2 1556 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC12-205ENST00000416918 CECR2Q9BXF3 1484 aa18.69■□□□□ 0.58
TRAPPC12-205ENST00000416918 UNC13AQ9UPW8 1703 aa18.67■□□□□ 0.58
TRAPPC12-205ENST00000416918 MROH2BQ7Z745 1585 aa18.64■□□□□ 0.57
TRAPPC12-205ENST00000416918 CHIC1Q5VXU3 224 aa18.62■□□□□ 0.57
TRAPPC12-205ENST00000416918 BICRAQ9NZM4 1560 aa18.6■□□□□ 0.57
TRAPPC12-205ENST00000416918 SMARCA4P51532 1647 aa18.52■□□□□ 0.56
TRAPPC12-205ENST00000416918 PABPN1Q86U42 306 aaKnown RBP eCLIP18.46■□□□□ 0.55
TRAPPC12-205ENST00000416918 WIZO95785 1651 aa18.43■□□□□ 0.54
TRAPPC12-205ENST00000416918 TOP2AP11388 1531 aaKnown RBP18.41■□□□□ 0.54
TRAPPC12-205ENST00000416918 PEG3Q9GZU2 1588 aa18.4■□□□□ 0.54
TRAPPC12-205ENST00000416918 SMARCA2P51531 1590 aa18.3■□□□□ 0.52
TRAPPC12-205ENST00000416918 ATAD2BQ9ULI0 1458 aa18.22■□□□□ 0.51
TRAPPC12-205ENST00000416918 TRIM41Q8WV44 630 aa18.2■□□□□ 0.5
TRAPPC12-205ENST00000416918 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
TRAPPC12-205ENST00000416918 BAZ1BQ9UIG0 1483 aaKnown RBP18.14■□□□□ 0.49
TRAPPC12-205ENST00000416918 NCAPD3P42695 1498 aa18.12■□□□□ 0.49
TRAPPC12-205ENST00000416918 EIF4G1Q04637 1599 aaKnown RBP18.08■□□□□ 0.48
TRAPPC12-205ENST00000416918 HMGXB3Q12766 1538 aa18.08■□□□□ 0.48
TRAPPC12-205ENST00000416918 EEA1Q15075 1411 aa17.87■□□□□ 0.45
TRAPPC12-205ENST00000416918 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
TRAPPC12-205ENST00000416918 LOC105371045A0A1W2PR82 267 aa17.78■□□□□ 0.44
TRAPPC12-205ENST00000416918 CFTRP13569 1480 aa17.74■□□□□ 0.43
TRAPPC12-205ENST00000416918 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
TRAPPC12-205ENST00000416918 CC2D2AQ9P2K1 1620 aa17.7■□□□□ 0.42
TRAPPC12-205ENST00000416918 FAM9AQ8IZU1 332 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC12-205ENST00000416918 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
TRAPPC12-205ENST00000416918 CSRNP3Q8WYN3 585 aa17.64■□□□□ 0.41
TRAPPC12-205ENST00000416918 TOP2BQ02880 1626 aa17.6■□□□□ 0.41
TRAPPC12-205ENST00000416918 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
TRAPPC12-205ENST00000416918 BIVM-ERCC5R4GMW8 1640 aa17.55■□□□□ 0.4
TRAPPC12-205ENST00000416918 SOGA1O94964 1423 aa17.54■□□□□ 0.4
TRAPPC12-205ENST00000416918 PRDM2Q13029 1718 aa17.53■□□□□ 0.4
TRAPPC12-205ENST00000416918 TNIKQ9UKE5 1360 aa17.53■□□□□ 0.4
TRAPPC12-205ENST00000416918 GOLGA3Q08378 1498 aa17.49■□□□□ 0.39
TRAPPC12-205ENST00000416918 CEP164Q9UPV0 1460 aa17.49■□□□□ 0.39
TRAPPC12-205ENST00000416918 KIF21BO75037 1637 aa17.43■□□□□ 0.38
TRAPPC12-205ENST00000416918 CUX1P39880 1505 aa17.42■□□□□ 0.38
TRAPPC12-205ENST00000416918 TRIM26Q12899 539 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC12-205ENST00000416918 LAMC3Q9Y6N6 1575 aa17.41■□□□□ 0.38
TRAPPC12-205ENST00000416918 KIF27Q86VH2 1401 aa17.41■□□□□ 0.38
TRAPPC12-205ENST00000416918 RUSC2Q8N2Y8 1516 aa17.38■□□□□ 0.37
TRAPPC12-205ENST00000416918 UBTFP17480 764 aaKnown RBP17.38■□□□□ 0.37
TRAPPC12-205ENST00000416918 FANCD2Q9BXW9 1451 aa17.37■□□□□ 0.37
TRAPPC12-205ENST00000416918 PDS5BQ9NTI5 1447 aa17.35■□□□□ 0.37
TRAPPC12-205ENST00000416918 ERICH3Q5RHP9 1530 aa17.33■□□□□ 0.37
TRAPPC12-205ENST00000416918 CEP162Q5TB80 1403 aa17.33■□□□□ 0.36
TRAPPC12-205ENST00000416918 PRXQ9BXM0 1461 aa17.3■□□□□ 0.36
TRAPPC12-205ENST00000416918 PCGF6Q9BYE7 350 aa17.29■□□□□ 0.36
TRAPPC12-205ENST00000416918 DNMBPQ6XZF7 1577 aa17.28■□□□□ 0.36
TRAPPC12-205ENST00000416918 EHMT2Q96KQ7 1210 aa17.25■□□□□ 0.35
TRAPPC12-205ENST00000416918 FGD5Q6ZNL6 1462 aa17.23■□□□□ 0.35
TRAPPC12-205ENST00000416918 TOPBP1Q92547 1522 aa17.2■□□□□ 0.34
TRAPPC12-205ENST00000416918 CUX2O14529 1486 aa17.19■□□□□ 0.34
TRAPPC12-205ENST00000416918 RAPGEF2Q9Y4G8 1499 aa17.19■□□□□ 0.34
TRAPPC12-205ENST00000416918 CLIP1P30622 1438 aa17.19■□□□□ 0.34
TRAPPC12-205ENST00000416918 IGF1RP08069 1367 aa17.17■□□□□ 0.34
TRAPPC12-205ENST00000416918 ABCA10Q8WWZ4 1543 aa17.17■□□□□ 0.34
TRAPPC12-205ENST00000416918 NESP48681 1621 aa17.17■□□□□ 0.34
TRAPPC12-205ENST00000416918 POLA1P09884 1462 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC12-205ENST00000416918 CARMIL1Q5VZK9 1371 aa17.11■□□□□ 0.33
TRAPPC12-205ENST00000416918 HRCP23327 699 aa17.1■□□□□ 0.33
TRAPPC12-205ENST00000416918 VPS8Q8N3P4 1428 aa17.09■□□□□ 0.33
TRAPPC12-205ENST00000416918 URB2Q14146 1524 aaKnown RBP17.07■□□□□ 0.32
TRAPPC12-205ENST00000416918 APLP2Q06481 763 aa17.06■□□□□ 0.32
TRAPPC12-205ENST00000416918 ZEB1P37275 1124 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC12-205ENST00000416918 MRC2Q9UBG0 1479 aa17.02■□□□□ 0.32
TRAPPC12-205ENST00000416918 CUL7Q14999 1698 aa17.01■□□□□ 0.31
TRAPPC12-205ENST00000416918 DNAJC5BQ9UF47 199 aa16.99■□□□□ 0.31
TRAPPC12-205ENST00000416918 RAD54L2Q9Y4B4 1467 aa16.99■□□□□ 0.31
TRAPPC12-205ENST00000416918 WDR97A6NE52 1622 aa16.95■□□□□ 0.3
TRAPPC12-205ENST00000416918 GAPVD1Q14C86 1478 aa16.94■□□□□ 0.3
TRAPPC12-205ENST00000416918 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
TRAPPC12-205ENST00000416918 ABCA5Q8WWZ7 1642 aa16.92■□□□□ 0.3
TRAPPC12-205ENST00000416918 IFT140Q96RY7 1462 aa16.91■□□□□ 0.3
TRAPPC12-205ENST00000416918 WDR62O43379 1518 aa16.89■□□□□ 0.29
TRAPPC12-205ENST00000416918 ARAP1Q96P48 1450 aa16.88■□□□□ 0.29
TRAPPC12-205ENST00000416918 TARBP1Q13395 1621 aaKnown RBP16.88■□□□□ 0.29
TRAPPC12-205ENST00000416918 FHAD1B1AJZ9 1412 aa16.87■□□□□ 0.29
TRAPPC12-205ENST00000416918 ARHGAP35Q9NRY4 1499 aa16.86■□□□□ 0.29
TRAPPC12-205ENST00000416918 EFCAB5A4FU69 1503 aa16.86■□□□□ 0.29
TRAPPC12-205ENST00000416918 MAP3K1Q13233 1512 aa16.86■□□□□ 0.29
TRAPPC12-205ENST00000416918 TDRD9Q8NDG6 1382 aaKnown RBP16.86■□□□□ 0.29
TRAPPC12-205ENST00000416918 ERCC6Q03468 1493 aa16.83■□□□□ 0.28
TRAPPC12-205ENST00000416918 GRIN2BQ13224 1484 aa16.81■□□□□ 0.28
TRAPPC12-205ENST00000416918 PPARGC1BQ86YN6 1023 aaKnown RBP16.8■□□□□ 0.28
TRAPPC12-205ENST00000416918 RANGAP1P46060 587 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms