RNA–Protein interactions for RNA: ENST00000549996.5

NR1H4-207, Transcript of nuclear receptor subfamily 1 group H member 4, humanhuman

TSL 1 (best) BASIC

Gene NR1H4, Length 1,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4-207ENST00000549996 NISCHQ9Y2I1 1504 aa25.43■■□□□ 1.66
NR1H4-207ENST00000549996 CCDC180Q9P1Z9 1646 aa22.55■■□□□ 1.2
NR1H4-207ENST00000549996 ABCC9O60706 1549 aa22.24■■□□□ 1.15
NR1H4-207ENST00000549996 DCAF8L2P0C7V8 631 aa21.42■■□□□ 1.02
NR1H4-207ENST00000549996 RB1CC1Q8TDY2 1594 aa21.31■■□□□ 1
NR1H4-207ENST00000549996 NACADO15069 1562 aa21.27■□□□□ 0.99
NR1H4-207ENST00000549996 ZCCHC6Q5VYS8 1495 aaKnown RBP21.17■□□□□ 0.98
NR1H4-207ENST00000549996 MYO15BQ96JP2 1530 aa21.1■□□□□ 0.97
NR1H4-207ENST00000549996 DCAF1Q9Y4B6 1507 aa20.99■□□□□ 0.95
NR1H4-207ENST00000549996 PABPN1Q86U42 306 aaKnown RBP eCLIP20.83■□□□□ 0.93
NR1H4-207ENST00000549996 UNC13AQ9UPW8 1703 aa20.72■□□□□ 0.91
NR1H4-207ENST00000549996 SCRIBQ14160 1630 aa20.67■□□□□ 0.9
NR1H4-207ENST00000549996 BICRAQ9NZM4 1560 aa20.64■□□□□ 0.89
NR1H4-207ENST00000549996 DNAJC5BQ9UF47 199 aa20.47■□□□□ 0.87
NR1H4-207ENST00000549996 SHROOM4Q9ULL8 1493 aa20.43■□□□□ 0.86
NR1H4-207ENST00000549996 EIF4G1Q04637 1599 aaKnown RBP20.13■□□□□ 0.81
NR1H4-207ENST00000549996 CC2D2AQ9P2K1 1620 aa20.06■□□□□ 0.8
NR1H4-207ENST00000549996 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
NR1H4-207ENST00000549996 SMARCA4P51532 1647 aa19.72■□□□□ 0.75
NR1H4-207ENST00000549996 BAZ1AQ9NRL2 1556 aaPredicted RBP19.71■□□□□ 0.75
NR1H4-207ENST00000549996 ATAD2BQ9ULI0 1458 aa19.66■□□□□ 0.74
NR1H4-207ENST00000549996 NCAPD3P42695 1498 aa19.64■□□□□ 0.73
NR1H4-207ENST00000549996 SMARCA2P51531 1590 aa19.62■□□□□ 0.73
NR1H4-207ENST00000549996 MROH2BQ7Z745 1585 aa19.61■□□□□ 0.73
NR1H4-207ENST00000549996 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
NR1H4-207ENST00000549996 HMGXB3Q12766 1538 aa19.52■□□□□ 0.71
NR1H4-207ENST00000549996 PEG3Q9GZU2 1588 aa19.5■□□□□ 0.71
NR1H4-207ENST00000549996 RSF1Q96T23 1441 aaPredicted RBP19.38■□□□□ 0.69
NR1H4-207ENST00000549996 WIZO95785 1651 aa19.36■□□□□ 0.69
NR1H4-207ENST00000549996 NESP48681 1621 aa19.22■□□□□ 0.67
NR1H4-207ENST00000549996 ERCC6Q03468 1493 aa19.2■□□□□ 0.66
NR1H4-207ENST00000549996 TOP2AP11388 1531 aaKnown RBP19.17■□□□□ 0.66
NR1H4-207ENST00000549996 LAMC3Q9Y6N6 1575 aa19.11■□□□□ 0.65
NR1H4-207ENST00000549996 CADPSQ9ULU8 1353 aa19.11■□□□□ 0.65
NR1H4-207ENST00000549996 PDS5BQ9NTI5 1447 aa19.05■□□□□ 0.64
NR1H4-207ENST00000549996 AEBP2Q6ZN18 517 aaPredicted RBP19■□□□□ 0.63
NR1H4-207ENST00000549996 CCDC88BA6NC98 1476 aa18.97■□□□□ 0.63
NR1H4-207ENST00000549996 CFTRP13569 1480 aa18.96■□□□□ 0.63
NR1H4-207ENST00000549996 SUPT5HO00267 1087 aaKnown RBP18.96■□□□□ 0.63
NR1H4-207ENST00000549996 CUX2O14529 1486 aa18.95■□□□□ 0.62
NR1H4-207ENST00000549996 KIF21AQ7Z4S6 1674 aa18.91■□□□□ 0.62
NR1H4-207ENST00000549996 FANCD2Q9BXW9 1451 aa18.88■□□□□ 0.61
NR1H4-207ENST00000549996 THOC2Q8NI27 1593 aaKnown RBP18.87■□□□□ 0.61
NR1H4-207ENST00000549996 CEP164Q9UPV0 1460 aa18.86■□□□□ 0.61
NR1H4-207ENST00000549996 MRC2Q9UBG0 1479 aa18.83■□□□□ 0.61
NR1H4-207ENST00000549996 WDR62O43379 1518 aa18.74■□□□□ 0.59
NR1H4-207ENST00000549996 URB2Q14146 1524 aaKnown RBP18.68■□□□□ 0.58
NR1H4-207ENST00000549996 PRDM2Q13029 1718 aa18.67■□□□□ 0.58
NR1H4-207ENST00000549996 TOPBP1Q92547 1522 aa18.56■□□□□ 0.56
NR1H4-207ENST00000549996 ABCC8Q09428 1581 aa18.54■□□□□ 0.56
NR1H4-207ENST00000549996 DNMBPQ6XZF7 1577 aa18.51■□□□□ 0.55
NR1H4-207ENST00000549996 DNAJC5Q9H3Z4 198 aa18.47■□□□□ 0.55
NR1H4-207ENST00000549996 IFT140Q96RY7 1462 aa18.46■□□□□ 0.55
NR1H4-207ENST00000549996 POLA1P09884 1462 aaPredicted RBP18.41■□□□□ 0.54
NR1H4-207ENST00000549996 CUX1P39880 1505 aa18.39■□□□□ 0.54
NR1H4-207ENST00000549996 ZNF608Q9ULD9 1512 aaPredicted RBP18.39■□□□□ 0.54
NR1H4-207ENST00000549996 CHIC1Q5VXU3 224 aa18.38■□□□□ 0.53
NR1H4-207ENST00000549996 FGD5Q6ZNL6 1462 aa18.36■□□□□ 0.53
NR1H4-207ENST00000549996 SOGA1O94964 1423 aa18.36■□□□□ 0.53
NR1H4-207ENST00000549996 RAD54L2Q9Y4B4 1467 aa18.35■□□□□ 0.53
NR1H4-207ENST00000549996 TARBP1Q13395 1621 aaKnown RBP18.31■□□□□ 0.52
NR1H4-207ENST00000549996 AQRO60306 1485 aaKnown RBP eCLIP18.3■□□□□ 0.529e-8■■■□□ 15
NR1H4-207ENST00000549996 WRNQ14191 1432 aaPredicted RBP eCLIP18.29■□□□□ 0.52
NR1H4-207ENST00000549996 EIF4G3O43432 1585 aaKnown RBP18.28■□□□□ 0.52
NR1H4-207ENST00000549996 TDRD9Q8NDG6 1382 aaKnown RBP18.28■□□□□ 0.52
NR1H4-207ENST00000549996 OSCARQ8IYS5 282 aa18.23■□□□□ 0.51
NR1H4-207ENST00000549996 SYNJ1O43426 1573 aa18.2■□□□□ 0.5
NR1H4-207ENST00000549996 TOP2BQ02880 1626 aa18.19■□□□□ 0.5
NR1H4-207ENST00000549996 FBLN2P98095 1184 aa18.17■□□□□ 0.5
NR1H4-207ENST00000549996 BIVM-ERCC5R4GMW8 1640 aa18.16■□□□□ 0.5
NR1H4-207ENST00000549996 ABCA10Q8WWZ4 1543 aa18.16■□□□□ 0.5
NR1H4-207ENST00000549996 WDR97A6NE52 1622 aa18.15■□□□□ 0.5
NR1H4-207ENST00000549996 GRIN2BQ13224 1484 aa18.13■□□□□ 0.49
NR1H4-207ENST00000549996 GAPVD1Q14C86 1478 aa18.13■□□□□ 0.49
NR1H4-207ENST00000549996 SNAPC4Q5SXM2 1469 aa18.12■□□□□ 0.49
NR1H4-207ENST00000549996 CHMP7Q8WUX9 453 aaPredicted RBP18.08■□□□□ 0.48
NR1H4-207ENST00000549996 MAGI1Q96QZ7 1491 aaPredicted RBP18.07■□□□□ 0.48
NR1H4-207ENST00000549996 ABCA5Q8WWZ7 1642 aa18.06■□□□□ 0.48
NR1H4-207ENST00000549996 CHD1O14646 1710 aa18.01■□□□□ 0.47
NR1H4-207ENST00000549996 SYNJ2O15056 1496 aa18.01■□□□□ 0.47
NR1H4-207ENST00000549996 PBRM1Q86U86 1689 aa18.01■□□□□ 0.47
NR1H4-207ENST00000549996 TRIM41Q8WV44 630 aa17.93■□□□□ 0.46
NR1H4-207ENST00000549996 ERICH3Q5RHP9 1530 aa17.93■□□□□ 0.46
NR1H4-207ENST00000549996 FHAD1B1AJZ9 1412 aa17.92■□□□□ 0.46
NR1H4-207ENST00000549996 KIF27Q86VH2 1401 aa17.92■□□□□ 0.46
NR1H4-207ENST00000549996 ADAMTS12P58397 1594 aa17.91■□□□□ 0.46
NR1H4-207ENST00000549996 GRIN2AQ12879 1464 aa17.89■□□□□ 0.45
NR1H4-207ENST00000549996 ARHGEF11O15085 1522 aa17.88■□□□□ 0.45
NR1H4-207ENST00000549996 RIMBP3CA6NJZ7 1639 aa17.85■□□□□ 0.45
NR1H4-207ENST00000549996 RIMBP3BA6NNM3 1639 aa17.85■□□□□ 0.45
NR1H4-207ENST00000549996 RIMBP3Q9UFD9 1639 aa17.85■□□□□ 0.45
NR1H4-207ENST00000549996 CLASP1Q7Z460 1538 aa17.85■□□□□ 0.45
NR1H4-207ENST00000549996 IGF1RP08069 1367 aa17.85■□□□□ 0.45
NR1H4-207ENST00000549996 NUP160Q12769 1436 aa17.8■□□□□ 0.44
NR1H4-207ENST00000549996 CYB5RLQ6IPT4 315 aa17.8■□□□□ 0.44
NR1H4-207ENST00000549996 CEP170Q5SW79 1584 aa17.78■□□□□ 0.44
NR1H4-207ENST00000549996 CARMIL1Q5VZK9 1371 aa17.76■□□□□ 0.43
NR1H4-207ENST00000549996 ARAP1Q96P48 1450 aa17.74■□□□□ 0.43
NR1H4-207ENST00000549996 CUL7Q14999 1698 aa17.73■□□□□ 0.43
NR1H4-207ENST00000549996 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms