RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 AEBP2Q6ZN18 517 aaPredicted RBP21.66■■□□□ 1.06
RNF38-209ENST00000491349 CHIC1Q5VXU3 224 aa20.58■□□□□ 0.89
RNF38-209ENST00000491349 NISCHQ9Y2I1 1504 aa19.46■□□□□ 0.71
RNF38-209ENST00000491349 SENP3Q9H4L4 574 aaPredicted RBP18.43■□□□□ 0.54
RNF38-209ENST00000491349 PHF23Q9BUL5 403 aaPredicted RBP18.2■□□□□ 0.5
RNF38-209ENST00000491349 CCDC180Q9P1Z9 1646 aa17.31■□□□□ 0.36
RNF38-209ENST00000491349 FOXD1Q16676 465 aa17.2■□□□□ 0.34
RNF38-209ENST00000491349 ABCC9O60706 1549 aa16.65■□□□□ 0.26
RNF38-209ENST00000491349 PLPPR3Q6T4P5 718 aa16.43■□□□□ 0.22
RNF38-209ENST00000491349 DCAF8L2P0C7V8 631 aa16.28■□□□□ 0.2
RNF38-209ENST00000491349 ZCCHC6Q5VYS8 1495 aaKnown RBP16.24■□□□□ 0.19
RNF38-209ENST00000491349 NACADO15069 1562 aa16.21■□□□□ 0.18
RNF38-209ENST00000491349 RB1CC1Q8TDY2 1594 aa16.2■□□□□ 0.18
RNF38-209ENST00000491349 MYO15BQ96JP2 1530 aa16.14■□□□□ 0.18
RNF38-209ENST00000491349 DCAF1Q9Y4B6 1507 aa16.14■□□□□ 0.18
RNF38-209ENST00000491349 PPP6R1Q9UPN7 881 aa16.11■□□□□ 0.17
RNF38-209ENST00000491349 MSH5O43196 834 aa16.06■□□□□ 0.16
RNF38-209ENST00000491349 ADRA2BP18089 450 aa16.03■□□□□ 0.16
RNF38-209ENST00000491349 PIAS4Q8N2W9 510 aaPredicted RBP16.03■□□□□ 0.16
RNF38-209ENST00000491349 UNC13AQ9UPW8 1703 aa15.77■□□□□ 0.11
RNF38-209ENST00000491349 SCRIBQ14160 1630 aa15.76■□□□□ 0.11
RNF38-209ENST00000491349 POTEDQ86YR6 584 aa15.65■□□□□ 0.1
RNF38-209ENST00000491349 PABPN1Q86U42 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
RNF38-209ENST00000491349 SHROOM4Q9ULL8 1493 aa15.55■□□□□ 0.08
RNF38-209ENST00000491349 BICRAQ9NZM4 1560 aa15.54■□□□□ 0.08
RNF38-209ENST00000491349 EIF4G1Q04637 1599 aaKnown RBP15.19■□□□□ 0.02
RNF38-209ENST00000491349 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
RNF38-209ENST00000491349 SMARCA4P51532 1647 aa15.09■□□□□ 0.01
RNF38-209ENST00000491349 CC2D2AQ9P2K1 1620 aa15.09■□□□□ 0.01
RNF38-209ENST00000491349 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
RNF38-209ENST00000491349 SMARCA2P51531 1590 aa15.01□□□□□ -0.01
RNF38-209ENST00000491349 MROH2BQ7Z745 1585 aa14.96□□□□□ -0.01
RNF38-209ENST00000491349 DNAJC5BQ9UF47 199 aa14.94□□□□□ -0.02
RNF38-209ENST00000491349 PEG3Q9GZU2 1588 aa14.91□□□□□ -0.02
RNF38-209ENST00000491349 ATAD2BQ9ULI0 1458 aa14.91□□□□□ -0.02
RNF38-209ENST00000491349 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
RNF38-209ENST00000491349 BAZ1BQ9UIG0 1483 aaKnown RBP14.88□□□□□ -0.03
RNF38-209ENST00000491349 HMGXB3Q12766 1538 aa14.87□□□□□ -0.03
RNF38-209ENST00000491349 RSF1Q96T23 1441 aaPredicted RBP14.87□□□□□ -0.03
RNF38-209ENST00000491349 WIZO95785 1651 aa14.86□□□□□ -0.03
RNF38-209ENST00000491349 SUPT5HO00267 1087 aaKnown RBP14.74□□□□□ -0.05
RNF38-209ENST00000491349 TOP2AP11388 1531 aaKnown RBP14.74□□□□□ -0.05
RNF38-209ENST00000491349 MAPK8IP2Q13387 824 aaPredicted RBP14.73□□□□□ -0.05
RNF38-209ENST00000491349 DMRT2Q9Y5R5 561 aa14.64□□□□□ -0.07
RNF38-209ENST00000491349 SCAF1Q9H7N4 1312 aaKnown RBP14.64□□□□□ -0.07
RNF38-209ENST00000491349 LAMC3Q9Y6N6 1575 aa14.54□□□□□ -0.08
RNF38-209ENST00000491349 CCDC88BA6NC98 1476 aa14.52□□□□□ -0.08
RNF38-209ENST00000491349 CADPSQ9ULU8 1353 aa14.48□□□□□ -0.09
RNF38-209ENST00000491349 PRDM2Q13029 1718 aa14.46□□□□□ -0.1
RNF38-209ENST00000491349 PDS5BQ9NTI5 1447 aa14.45□□□□□ -0.1
RNF38-209ENST00000491349 ERCC6Q03468 1493 aa14.44□□□□□ -0.1
RNF38-209ENST00000491349 CFTRP13569 1480 aa14.42□□□□□ -0.1
RNF38-209ENST00000491349 NESP48681 1621 aa14.41□□□□□ -0.1
RNF38-209ENST00000491349 PPP4R3CPQ6ZMV5 832 aa14.41□□□□□ -0.1
RNF38-209ENST00000491349 KIF21AQ7Z4S6 1674 aa14.33□□□□□ -0.11
RNF38-209ENST00000491349 CEP164Q9UPV0 1460 aa14.33□□□□□ -0.12
RNF38-209ENST00000491349 FANCD2Q9BXW9 1451 aa14.32□□□□□ -0.12
RNF38-209ENST00000491349 MRC2Q9UBG0 1479 aa14.25□□□□□ -0.13
RNF38-209ENST00000491349 ABCC8Q09428 1581 aa14.22□□□□□ -0.13
RNF38-209ENST00000491349 THOC2Q8NI27 1593 aaKnown RBP14.19□□□□□ -0.14
RNF38-209ENST00000491349 CUX2O14529 1486 aa14.18□□□□□ -0.14
RNF38-209ENST00000491349 WDR62O43379 1518 aa14.16□□□□□ -0.14
RNF38-209ENST00000491349 DNMBPQ6XZF7 1577 aa14.14□□□□□ -0.15
RNF38-209ENST00000491349 HOXD11P31277 338 aaPredicted RBP14.13□□□□□ -0.15
RNF38-209ENST00000491349 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
RNF38-209ENST00000491349 URB2Q14146 1524 aaKnown RBP14.1□□□□□ -0.15
RNF38-209ENST00000491349 TOPBP1Q92547 1522 aa14.1□□□□□ -0.15
RNF38-209ENST00000491349 WRNQ14191 1432 aaPredicted RBP eCLIP14.09□□□□□ -0.15
RNF38-209ENST00000491349 CUX1P39880 1505 aa14.04□□□□□ -0.16
RNF38-209ENST00000491349 TOP2BQ02880 1626 aa14.04□□□□□ -0.16
RNF38-209ENST00000491349 BIVM-ERCC5R4GMW8 1640 aa14.04□□□□□ -0.16
RNF38-209ENST00000491349 IFT140Q96RY7 1462 aa14.01□□□□□ -0.17
RNF38-209ENST00000491349 RNF216Q9NWF9 866 aaPredicted RBP14.01□□□□□ -0.17
RNF38-209ENST00000491349 FGD5Q6ZNL6 1462 aa14□□□□□ -0.17
RNF38-209ENST00000491349 SYNJ1O43426 1573 aa13.99□□□□□ -0.17
RNF38-209ENST00000491349 POLA1P09884 1462 aaPredicted RBP13.98□□□□□ -0.17
RNF38-209ENST00000491349 SOGA1O94964 1423 aa13.98□□□□□ -0.17
RNF38-209ENST00000491349 TRIM41Q8WV44 630 aa13.97□□□□□ -0.17
RNF38-209ENST00000491349 DCAF8L1A6NGE4 600 aa13.94□□□□□ -0.18
RNF38-209ENST00000491349 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
RNF38-209ENST00000491349 TARBP1Q13395 1621 aaKnown RBP13.91□□□□□ -0.18
RNF38-209ENST00000491349 RAD54L2Q9Y4B4 1467 aa13.89□□□□□ -0.19
RNF38-209ENST00000491349 ABCA10Q8WWZ4 1543 aa13.88□□□□□ -0.19
RNF38-209ENST00000491349 EIF4G3O43432 1585 aaKnown RBP13.86□□□□□ -0.19
RNF38-209ENST00000491349 GAPVD1Q14C86 1478 aa13.83□□□□□ -0.2
RNF38-209ENST00000491349 TDRD9Q8NDG6 1382 aaKnown RBP13.83□□□□□ -0.2
RNF38-209ENST00000491349 KIF27Q86VH2 1401 aa13.82□□□□□ -0.2
RNF38-209ENST00000491349 ZNF608Q9ULD9 1512 aaPredicted RBP13.82□□□□□ -0.2
RNF38-209ENST00000491349 NCBP3Q53F19 620 aaKnown RBP13.82□□□□□ -0.2
RNF38-209ENST00000491349 PBRM1Q86U86 1689 aa13.82□□□□□ -0.2
RNF38-209ENST00000491349 AQRO60306 1485 aaKnown RBP eCLIP13.8□□□□□ -0.2
RNF38-209ENST00000491349 GRIN2BQ13224 1484 aa13.8□□□□□ -0.2
RNF38-209ENST00000491349 ABCA5Q8WWZ7 1642 aa13.8□□□□□ -0.2
RNF38-209ENST00000491349 ERICH3Q5RHP9 1530 aa13.75□□□□□ -0.21
RNF38-209ENST00000491349 MAGI1Q96QZ7 1491 aaPredicted RBP13.75□□□□□ -0.21
RNF38-209ENST00000491349 EEA1Q15075 1411 aa13.73□□□□□ -0.21
RNF38-209ENST00000491349 CACNB1Q02641 598 aaPredicted RBP13.73□□□□□ -0.21
RNF38-209ENST00000491349 RNF39Q9H2S5 420 aa13.73□□□□□ -0.21
RNF38-209ENST00000491349 CUL7Q14999 1698 aa13.72□□□□□ -0.21
RNF38-209ENST00000491349 FBLN2P98095 1184 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms