RNA–Protein interactions for RNA: ENST00000563625.1

ZFHX3-205, Transcript of zinc finger homeobox 3, humanhuman

TSL 3

Gene ZFHX3, Length 455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX3-205ENST00000563625 AEBP2Q6ZN18 517 aaPredicted RBP29.41■■■□□ 2.3
ZFHX3-205ENST00000563625 CHIC1Q5VXU3 224 aa28.08■■■□□ 2.09
ZFHX3-205ENST00000563625 NISCHQ9Y2I1 1504 aa27.25■■□□□ 1.95
ZFHX3-205ENST00000563625 SENP3Q9H4L4 574 aaPredicted RBP24.99■■□□□ 1.59
ZFHX3-205ENST00000563625 PHF23Q9BUL5 403 aaPredicted RBP24.74■■□□□ 1.55
ZFHX3-205ENST00000563625 ABCC9O60706 1549 aa24.4■■□□□ 1.5
ZFHX3-205ENST00000563625 CCDC180Q9P1Z9 1646 aa24.39■■□□□ 1.5
ZFHX3-205ENST00000563625 FOXD1Q16676 465 aa23.31■■□□□ 1.32
ZFHX3-205ENST00000563625 RB1CC1Q8TDY2 1594 aa23.17■■□□□ 1.3
ZFHX3-205ENST00000563625 DNAJC5BQ9UF47 199 aa23.07■■□□□ 1.28
ZFHX3-205ENST00000563625 NACADO15069 1562 aa23.06■■□□□ 1.28
ZFHX3-205ENST00000563625 MYO15BQ96JP2 1530 aa22.81■■□□□ 1.24
ZFHX3-205ENST00000563625 UNC13AQ9UPW8 1703 aa22.79■■□□□ 1.24
ZFHX3-205ENST00000563625 DCAF8L2P0C7V8 631 aa22.77■■□□□ 1.24
ZFHX3-205ENST00000563625 PABPN1Q86U42 306 aaKnown RBP eCLIP22.71■■□□□ 1.23
ZFHX3-205ENST00000563625 BICRAQ9NZM4 1560 aa22.7■■□□□ 1.22
ZFHX3-205ENST00000563625 ZCCHC6Q5VYS8 1495 aaKnown RBP22.6■■□□□ 1.21
ZFHX3-205ENST00000563625 PLPPR3Q6T4P5 718 aa22.52■■□□□ 1.2
ZFHX3-205ENST00000563625 DCAF1Q9Y4B6 1507 aa22.52■■□□□ 1.19
ZFHX3-205ENST00000563625 SHROOM4Q9ULL8 1493 aa22.22■■□□□ 1.15
ZFHX3-205ENST00000563625 SCRIBQ14160 1630 aa22.2■■□□□ 1.15
ZFHX3-205ENST00000563625 CC2D2AQ9P2K1 1620 aa22.06■■□□□ 1.12
ZFHX3-205ENST00000563625 EIF4G1Q04637 1599 aaKnown RBP22.03■■□□□ 1.12
ZFHX3-205ENST00000563625 PPP6R1Q9UPN7 881 aa21.99■■□□□ 1.11
ZFHX3-205ENST00000563625 CECR2Q9BXF3 1484 aa21.96■■□□□ 1.11
ZFHX3-205ENST00000563625 ADRA2BP18089 450 aa21.93■■□□□ 1.1
ZFHX3-205ENST00000563625 PIAS4Q8N2W9 510 aaPredicted RBP21.84■■□□□ 1.09
ZFHX3-205ENST00000563625 MSH5O43196 834 aa21.69■■□□□ 1.06
ZFHX3-205ENST00000563625 NCAPD3P42695 1498 aa21.36■■□□□ 1.01
ZFHX3-205ENST00000563625 ATAD2BQ9ULI0 1458 aa21.28■■□□□ 1
ZFHX3-205ENST00000563625 SMARCA4P51532 1647 aa21.23■□□□□ 0.99
ZFHX3-205ENST00000563625 HMGXB3Q12766 1538 aa21.15■□□□□ 0.98
ZFHX3-205ENST00000563625 SMARCA2P51531 1590 aa21.12■□□□□ 0.97
ZFHX3-205ENST00000563625 PEG3Q9GZU2 1588 aa21.09■□□□□ 0.97
ZFHX3-205ENST00000563625 BAZ1AQ9NRL2 1556 aaPredicted RBP21.07■□□□□ 0.96
ZFHX3-205ENST00000563625 DNAJC5Q9H3Z4 198 aa21.06■□□□□ 0.96
ZFHX3-205ENST00000563625 MROH2BQ7Z745 1585 aa21.03■□□□□ 0.96
ZFHX3-205ENST00000563625 NESP48681 1621 aa21.03■□□□□ 0.96
ZFHX3-205ENST00000563625 CUX2O14529 1486 aa21■□□□□ 0.95
ZFHX3-205ENST00000563625 BAZ1BQ9UIG0 1483 aaKnown RBP20.97■□□□□ 0.95
ZFHX3-205ENST00000563625 ERCC6Q03468 1493 aa20.92■□□□□ 0.94
ZFHX3-205ENST00000563625 POTEDQ86YR6 584 aa20.87■□□□□ 0.93
ZFHX3-205ENST00000563625 THOC2Q8NI27 1593 aaKnown RBP20.81■□□□□ 0.92
ZFHX3-205ENST00000563625 LAMC3Q9Y6N6 1575 aa20.79■□□□□ 0.92
ZFHX3-205ENST00000563625 WIZO95785 1651 aa20.74■□□□□ 0.91
ZFHX3-205ENST00000563625 KIF21AQ7Z4S6 1674 aa20.71■□□□□ 0.91
ZFHX3-205ENST00000563625 CADPSQ9ULU8 1353 aa20.66■□□□□ 0.9
ZFHX3-205ENST00000563625 PDS5BQ9NTI5 1447 aa20.61■□□□□ 0.89
ZFHX3-205ENST00000563625 RSF1Q96T23 1441 aaPredicted RBP20.59■□□□□ 0.89
ZFHX3-205ENST00000563625 WDR62O43379 1518 aa20.5■□□□□ 0.87
ZFHX3-205ENST00000563625 MRC2Q9UBG0 1479 aa20.49■□□□□ 0.87
ZFHX3-205ENST00000563625 CFTRP13569 1480 aa20.46■□□□□ 0.87
ZFHX3-205ENST00000563625 TOP2AP11388 1531 aaKnown RBP20.44■□□□□ 0.86
ZFHX3-205ENST00000563625 FANCD2Q9BXW9 1451 aa20.39■□□□□ 0.85
ZFHX3-205ENST00000563625 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
ZFHX3-205ENST00000563625 URB2Q14146 1524 aaKnown RBP20.31■□□□□ 0.84
ZFHX3-205ENST00000563625 CCDC88BA6NC98 1476 aa20.24■□□□□ 0.83
ZFHX3-205ENST00000563625 PRDM2Q13029 1718 aa20.19■□□□□ 0.82
ZFHX3-205ENST00000563625 MAPK8IP2Q13387 824 aaPredicted RBP20.09■□□□□ 0.81
ZFHX3-205ENST00000563625 ZNF608Q9ULD9 1512 aaPredicted RBP20.06■□□□□ 0.8
ZFHX3-205ENST00000563625 TOPBP1Q92547 1522 aa20.05■□□□□ 0.8
ZFHX3-205ENST00000563625 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
ZFHX3-205ENST00000563625 OSCARQ8IYS5 282 aa19.99■□□□□ 0.79
ZFHX3-205ENST00000563625 IFT140Q96RY7 1462 aa19.99■□□□□ 0.79
ZFHX3-205ENST00000563625 TRIM41Q8WV44 630 aa19.97■□□□□ 0.79
ZFHX3-205ENST00000563625 DNMBPQ6XZF7 1577 aa19.94■□□□□ 0.78
ZFHX3-205ENST00000563625 TARBP1Q13395 1621 aaKnown RBP19.92■□□□□ 0.78
ZFHX3-205ENST00000563625 ABCC8Q09428 1581 aa19.91■□□□□ 0.78
ZFHX3-205ENST00000563625 EIF4G3O43432 1585 aaKnown RBP19.88■□□□□ 0.77
ZFHX3-205ENST00000563625 DMRT2Q9Y5R5 561 aa19.86■□□□□ 0.77
ZFHX3-205ENST00000563625 POLA1P09884 1462 aaPredicted RBP19.85■□□□□ 0.77
ZFHX3-205ENST00000563625 AQRO60306 1485 aaKnown RBP eCLIP19.84■□□□□ 0.77
ZFHX3-205ENST00000563625 RIMBP3CA6NJZ7 1639 aa19.82■□□□□ 0.76
ZFHX3-205ENST00000563625 RIMBP3BA6NNM3 1639 aa19.82■□□□□ 0.76
ZFHX3-205ENST00000563625 RIMBP3Q9UFD9 1639 aa19.82■□□□□ 0.76
ZFHX3-205ENST00000563625 PPP4R3CPQ6ZMV5 832 aa19.8■□□□□ 0.76
ZFHX3-205ENST00000563625 RAD54L2Q9Y4B4 1467 aa19.79■□□□□ 0.76
ZFHX3-205ENST00000563625 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
ZFHX3-205ENST00000563625 CUX1P39880 1505 aa19.74■□□□□ 0.75
ZFHX3-205ENST00000563625 CHD1O14646 1710 aa19.73■□□□□ 0.75
ZFHX3-205ENST00000563625 FGD5Q6ZNL6 1462 aa19.7■□□□□ 0.74
ZFHX3-205ENST00000563625 TDRD9Q8NDG6 1382 aaKnown RBP19.7■□□□□ 0.74
ZFHX3-205ENST00000563625 SOGA1O94964 1423 aa19.69■□□□□ 0.74
ZFHX3-205ENST00000563625 WDR97A6NE52 1622 aa19.62■□□□□ 0.73
ZFHX3-205ENST00000563625 ARAP1Q96P48 1450 aa19.6■□□□□ 0.73
ZFHX3-205ENST00000563625 SNAPC4Q5SXM2 1469 aa19.6■□□□□ 0.73
ZFHX3-205ENST00000563625 CLASP1Q7Z460 1538 aa19.57■□□□□ 0.72
ZFHX3-205ENST00000563625 CYB5RLQ6IPT4 315 aa19.53■□□□□ 0.72
ZFHX3-205ENST00000563625 MAGI1Q96QZ7 1491 aaPredicted RBP19.53■□□□□ 0.72
ZFHX3-205ENST00000563625 FBLN2P98095 1184 aa19.52■□□□□ 0.72
ZFHX3-205ENST00000563625 GRIN2BQ13224 1484 aa19.52■□□□□ 0.72
ZFHX3-205ENST00000563625 ABCA10Q8WWZ4 1543 aa19.5■□□□□ 0.71
ZFHX3-205ENST00000563625 ABCA5Q8WWZ7 1642 aa19.48■□□□□ 0.71
ZFHX3-205ENST00000563625 SUPT5HO00267 1087 aaKnown RBP19.48■□□□□ 0.71
ZFHX3-205ENST00000563625 SYNJ2O15056 1496 aa19.48■□□□□ 0.71
ZFHX3-205ENST00000563625 GAPVD1Q14C86 1478 aa19.46■□□□□ 0.71
ZFHX3-205ENST00000563625 PBRM1Q86U86 1689 aa19.46■□□□□ 0.71
ZFHX3-205ENST00000563625 SYNJ1O43426 1573 aa19.41■□□□□ 0.7
ZFHX3-205ENST00000563625 CHMP7Q8WUX9 453 aaPredicted RBP19.41■□□□□ 0.7
ZFHX3-205ENST00000563625 BIVM-ERCC5R4GMW8 1640 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms