RNA–Protein interactions for RNA: ENST00000413305.5

SSUH2-203, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 1 (best)

Gene SSUH2, Length 1,874 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-203ENST00000413305 NISCHQ9Y2I1 1504 aa28.69■■■□□ 2.18
SSUH2-203ENST00000413305 CCDC180Q9P1Z9 1646 aa24.9■■□□□ 1.58
SSUH2-203ENST00000413305 ZCCHC6Q5VYS8 1495 aaKnown RBP24.22■■□□□ 1.47
SSUH2-203ENST00000413305 DCAF1Q9Y4B6 1507 aa23.8■■□□□ 1.4
SSUH2-203ENST00000413305 SHROOM4Q9ULL8 1493 aa23.52■■□□□ 1.36
SSUH2-203ENST00000413305 MYO15BQ96JP2 1530 aa23.38■■□□□ 1.33
SSUH2-203ENST00000413305 DCAF8L2P0C7V8 631 aa23.29■■□□□ 1.32
SSUH2-203ENST00000413305 PELP1Q8IZL8 1130 aaKnown RBP23.24■■□□□ 1.31
SSUH2-203ENST00000413305 NACADO15069 1562 aa23.04■■□□□ 1.28
SSUH2-203ENST00000413305 ABCC9O60706 1549 aa22.99■■□□□ 1.27
SSUH2-203ENST00000413305 SCRIBQ14160 1630 aa22.84■■□□□ 1.25
SSUH2-203ENST00000413305 SUPT5HO00267 1087 aaKnown RBP22.81■■□□□ 1.24
SSUH2-203ENST00000413305 HRCP23327 699 aa22.77■■□□□ 1.24
SSUH2-203ENST00000413305 RB1CC1Q8TDY2 1594 aa22.72■■□□□ 1.23
SSUH2-203ENST00000413305 MYT1Q01538 1121 aa22.71■■□□□ 1.23
SSUH2-203ENST00000413305 RSF1Q96T23 1441 aaPredicted RBP22.39■■□□□ 1.17
SSUH2-203ENST00000413305 UNC13AQ9UPW8 1703 aa22.33■■□□□ 1.16
SSUH2-203ENST00000413305 CECR2Q9BXF3 1484 aa22.2■■□□□ 1.14
SSUH2-203ENST00000413305 MROH2BQ7Z745 1585 aa22.15■■□□□ 1.14
SSUH2-203ENST00000413305 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
SSUH2-203ENST00000413305 BAZ1AQ9NRL2 1556 aaPredicted RBP22.13■■□□□ 1.13
SSUH2-203ENST00000413305 BICRAQ9NZM4 1560 aa22.05■■□□□ 1.12
SSUH2-203ENST00000413305 WIZO95785 1651 aa22■■□□□ 1.11
SSUH2-203ENST00000413305 SMARCA4P51532 1647 aa21.98■■□□□ 1.11
SSUH2-203ENST00000413305 TOP2AP11388 1531 aaKnown RBP21.83■■□□□ 1.08
SSUH2-203ENST00000413305 PCGF6Q9BYE7 350 aa21.78■■□□□ 1.08
SSUH2-203ENST00000413305 PPARGC1BQ86YN6 1023 aaKnown RBP21.77■■□□□ 1.08
SSUH2-203ENST00000413305 PEG3Q9GZU2 1588 aa21.75■■□□□ 1.07
SSUH2-203ENST00000413305 EIF4G1Q04637 1599 aaKnown RBP21.69■■□□□ 1.06
SSUH2-203ENST00000413305 PABPN1Q86U42 306 aaKnown RBP eCLIP21.69■■□□□ 1.064e-7■■■□□ 16.6
SSUH2-203ENST00000413305 SMARCA2P51531 1590 aa21.62■■□□□ 1.05
SSUH2-203ENST00000413305 SCAF1Q9H7N4 1312 aaKnown RBP21.61■■□□□ 1.05
SSUH2-203ENST00000413305 ZEB1P37275 1124 aaPredicted RBP21.59■■□□□ 1.05
SSUH2-203ENST00000413305 CCDC88BA6NC98 1476 aa21.54■■□□□ 1.04
SSUH2-203ENST00000413305 TTBK1Q5TCY1 1321 aaPredicted RBP21.53■■□□□ 1.04
SSUH2-203ENST00000413305 ATAD2BQ9ULI0 1458 aa21.48■■□□□ 1.03
SSUH2-203ENST00000413305 TRIM41Q8WV44 630 aa21.46■■□□□ 1.03
SSUH2-203ENST00000413305 BAZ1BQ9UIG0 1483 aaKnown RBP21.37■■□□□ 1.01
SSUH2-203ENST00000413305 HMGXB3Q12766 1538 aa21.3■■□□□ 1
SSUH2-203ENST00000413305 TRIM26Q12899 539 aaPredicted RBP21.29■■□□□ 1
SSUH2-203ENST00000413305 NCAPD3P42695 1498 aa21.24■□□□□ 0.99
SSUH2-203ENST00000413305 LOC105371045A0A1W2PR82 267 aa21.24■□□□□ 0.99
SSUH2-203ENST00000413305 ABCC8Q09428 1581 aa21.22■□□□□ 0.99
SSUH2-203ENST00000413305 ACIN1Q9UKV3 1341 aaKnown RBP21.14■□□□□ 0.97
SSUH2-203ENST00000413305 WRNQ14191 1432 aaPredicted RBP eCLIP21.05■□□□□ 0.96
SSUH2-203ENST00000413305 EEA1Q15075 1411 aa21.03■□□□□ 0.96
SSUH2-203ENST00000413305 CENPBP07199 599 aaPredicted RBP21.03■□□□□ 0.96
SSUH2-203ENST00000413305 FAM9AQ8IZU1 332 aaPredicted RBP21.01■□□□□ 0.95
SSUH2-203ENST00000413305 SYNJ1O43426 1573 aa20.98■□□□□ 0.95
SSUH2-203ENST00000413305 PRDM2Q13029 1718 aa20.9■□□□□ 0.94
SSUH2-203ENST00000413305 TOP2BQ02880 1626 aa20.89■□□□□ 0.94
SSUH2-203ENST00000413305 BIVM-ERCC5R4GMW8 1640 aa20.89■□□□□ 0.94
SSUH2-203ENST00000413305 CFTRP13569 1480 aa20.89■□□□□ 0.93
SSUH2-203ENST00000413305 CC2D2AQ9P2K1 1620 aa20.89■□□□□ 0.93
SSUH2-203ENST00000413305 SOGA1O94964 1423 aa20.89■□□□□ 0.93
SSUH2-203ENST00000413305 GTF3C3Q9Y5Q9 886 aa20.84■□□□□ 0.93
SSUH2-203ENST00000413305 NEUROD1Q13562 356 aa20.83■□□□□ 0.92
SSUH2-203ENST00000413305 RUSC2Q8N2Y8 1516 aa20.78■□□□□ 0.92
SSUH2-203ENST00000413305 KIF21BO75037 1637 aa20.75■□□□□ 0.91
SSUH2-203ENST00000413305 CSRNP3Q8WYN3 585 aa20.75■□□□□ 0.91
SSUH2-203ENST00000413305 TNIKQ9UKE5 1360 aa20.73■□□□□ 0.91
SSUH2-203ENST00000413305 GOLGA3Q08378 1498 aa20.72■□□□□ 0.91
SSUH2-203ENST00000413305 CUX1P39880 1505 aa20.7■□□□□ 0.9
SSUH2-203ENST00000413305 CEP164Q9UPV0 1460 aa20.69■□□□□ 0.9
SSUH2-203ENST00000413305 CADPSQ9ULU8 1353 aa20.68■□□□□ 0.9
SSUH2-203ENST00000413305 CEP162Q5TB80 1403 aa20.63■□□□□ 0.89
SSUH2-203ENST00000413305 EHMT2Q96KQ7 1210 aa20.62■□□□□ 0.89
SSUH2-203ENST00000413305 ERICH3Q5RHP9 1530 aa20.54■□□□□ 0.88
SSUH2-203ENST00000413305 PRXQ9BXM0 1461 aa20.49■□□□□ 0.87
SSUH2-203ENST00000413305 KIF27Q86VH2 1401 aa20.48■□□□□ 0.87
SSUH2-203ENST00000413305 RAPGEF2Q9Y4G8 1499 aa20.47■□□□□ 0.87
SSUH2-203ENST00000413305 LAMC3Q9Y6N6 1575 aa20.47■□□□□ 0.87
SSUH2-203ENST00000413305 FANCD2Q9BXW9 1451 aa20.47■□□□□ 0.87
SSUH2-203ENST00000413305 BCL11AQ9H165 835 aa20.46■□□□□ 0.87
SSUH2-203ENST00000413305 UBTFP17480 764 aaKnown RBP20.45■□□□□ 0.86
SSUH2-203ENST00000413305 DIEXFQ68CQ4 756 aaKnown RBP20.45■□□□□ 0.86
SSUH2-203ENST00000413305 DNMBPQ6XZF7 1577 aa20.41■□□□□ 0.86
SSUH2-203ENST00000413305 FGD5Q6ZNL6 1462 aa20.38■□□□□ 0.85
SSUH2-203ENST00000413305 CLSPNQ9HAW4 1339 aa20.37■□□□□ 0.85
SSUH2-203ENST00000413305 CLIP1P30622 1438 aa20.36■□□□□ 0.85
SSUH2-203ENST00000413305 NESP48681 1621 aa20.33■□□□□ 0.85
SSUH2-203ENST00000413305 TOPBP1Q92547 1522 aa20.31■□□□□ 0.84
SSUH2-203ENST00000413305 CUX2O14529 1486 aa20.31■□□□□ 0.84
SSUH2-203ENST00000413305 ANP32EQ9BTT0 268 aa20.29■□□□□ 0.84
SSUH2-203ENST00000413305 VPS8Q8N3P4 1428 aa20.29■□□□□ 0.84
SSUH2-203ENST00000413305 ABCA10Q8WWZ4 1543 aa20.26■□□□□ 0.83
SSUH2-203ENST00000413305 POLA1P09884 1462 aaPredicted RBP20.24■□□□□ 0.83
SSUH2-203ENST00000413305 PDS5BQ9NTI5 1447 aa20.24■□□□□ 0.83
SSUH2-203ENST00000413305 IGF1RP08069 1367 aa20.23■□□□□ 0.83
SSUH2-203ENST00000413305 WDR97A6NE52 1622 aa20.22■□□□□ 0.83
SSUH2-203ENST00000413305 URB2Q14146 1524 aaKnown RBP20.2■□□□□ 0.82
SSUH2-203ENST00000413305 CCER1Q8TC90 406 aaPredicted RBP20.17■□□□□ 0.82
SSUH2-203ENST00000413305 KIF21AQ7Z4S6 1674 aa20.17■□□□□ 0.82
SSUH2-203ENST00000413305 ARAP1Q96P48 1450 aa20.16■□□□□ 0.82
SSUH2-203ENST00000413305 CUL7Q14999 1698 aa20.14■□□□□ 0.81
SSUH2-203ENST00000413305 CARMIL1Q5VZK9 1371 aa20.13■□□□□ 0.81
SSUH2-203ENST00000413305 ERICH6Q7L0X2 663 aa20.13■□□□□ 0.81
SSUH2-203ENST00000413305 RAD54L2Q9Y4B4 1467 aa20.12■□□□□ 0.81
SSUH2-203ENST00000413305 DNAJC5BQ9UF47 199 aa20.09■□□□□ 0.81
SSUH2-203ENST00000413305 ABCA5Q8WWZ7 1642 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms