RNA–Protein interactions for RNA: ENST00000470637.1

ABCD4-206, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-206ENST00000470637 NISCHQ9Y2I1 1504 aa27.36■■□□□ 1.97
ABCD4-206ENST00000470637 CCDC180Q9P1Z9 1646 aa24.35■■□□□ 1.49
ABCD4-206ENST00000470637 ABCC9O60706 1549 aa24.26■■□□□ 1.47
ABCD4-206ENST00000470637 DCAF8L2P0C7V8 631 aa23.13■■□□□ 1.29
ABCD4-206ENST00000470637 RB1CC1Q8TDY2 1594 aa23.12■■□□□ 1.29
ABCD4-206ENST00000470637 NACADO15069 1562 aa23.01■■□□□ 1.27
ABCD4-206ENST00000470637 MYO15BQ96JP2 1530 aa22.75■■□□□ 1.23
ABCD4-206ENST00000470637 ZCCHC6Q5VYS8 1495 aaKnown RBP22.69■■□□□ 1.22
ABCD4-206ENST00000470637 PABPN1Q86U42 306 aaKnown RBP eCLIP22.69■■□□□ 1.22
ABCD4-206ENST00000470637 DNAJC5BQ9UF47 199 aa22.62■■□□□ 1.21
ABCD4-206ENST00000470637 UNC13AQ9UPW8 1703 aa22.59■■□□□ 1.21
ABCD4-206ENST00000470637 DCAF1Q9Y4B6 1507 aa22.56■■□□□ 1.2
ABCD4-206ENST00000470637 BICRAQ9NZM4 1560 aa22.47■■□□□ 1.19
ABCD4-206ENST00000470637 SCRIBQ14160 1630 aa22.29■■□□□ 1.16
ABCD4-206ENST00000470637 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
ABCD4-206ENST00000470637 CC2D2AQ9P2K1 1620 aa21.89■■□□□ 1.09
ABCD4-206ENST00000470637 EIF4G1Q04637 1599 aaKnown RBP21.89■■□□□ 1.09
ABCD4-206ENST00000470637 CECR2Q9BXF3 1484 aa21.8■■□□□ 1.08
ABCD4-206ENST00000470637 NCAPD3P42695 1498 aa21.28■■□□□ 1
ABCD4-206ENST00000470637 SMARCA4P51532 1647 aa21.26■□□□□ 0.99
ABCD4-206ENST00000470637 ATAD2BQ9ULI0 1458 aa21.26■□□□□ 0.99
ABCD4-206ENST00000470637 BAZ1AQ9NRL2 1556 aaPredicted RBP21.19■□□□□ 0.98
ABCD4-206ENST00000470637 SMARCA2P51531 1590 aa21.16■□□□□ 0.98
ABCD4-206ENST00000470637 MROH2BQ7Z745 1585 aa21.11■□□□□ 0.97
ABCD4-206ENST00000470637 HMGXB3Q12766 1538 aa21.09■□□□□ 0.97
ABCD4-206ENST00000470637 BAZ1BQ9UIG0 1483 aaKnown RBP21.05■□□□□ 0.96
ABCD4-206ENST00000470637 PEG3Q9GZU2 1588 aa21.03■□□□□ 0.96
ABCD4-206ENST00000470637 NESP48681 1621 aa20.91■□□□□ 0.94
ABCD4-206ENST00000470637 ERCC6Q03468 1493 aa20.89■□□□□ 0.94
ABCD4-206ENST00000470637 WIZO95785 1651 aa20.86■□□□□ 0.93
ABCD4-206ENST00000470637 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
ABCD4-206ENST00000470637 CUX2O14529 1486 aa20.74■□□□□ 0.91
ABCD4-206ENST00000470637 LAMC3Q9Y6N6 1575 aa20.73■□□□□ 0.91
ABCD4-206ENST00000470637 CADPSQ9ULU8 1353 aa20.66■□□□□ 0.9
ABCD4-206ENST00000470637 PDS5BQ9NTI5 1447 aa20.63■□□□□ 0.89
ABCD4-206ENST00000470637 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.89
ABCD4-206ENST00000470637 THOC2Q8NI27 1593 aaKnown RBP20.58■□□□□ 0.88
ABCD4-206ENST00000470637 TOP2AP11388 1531 aaKnown RBP20.57■□□□□ 0.88
ABCD4-206ENST00000470637 DNAJC5Q9H3Z4 198 aa20.55■□□□□ 0.88
ABCD4-206ENST00000470637 CFTRP13569 1480 aa20.46■□□□□ 0.87
ABCD4-206ENST00000470637 MRC2Q9UBG0 1479 aa20.43■□□□□ 0.86
ABCD4-206ENST00000470637 FANCD2Q9BXW9 1451 aa20.42■□□□□ 0.86
ABCD4-206ENST00000470637 CEP164Q9UPV0 1460 aa20.4■□□□□ 0.86
ABCD4-206ENST00000470637 CCDC88BA6NC98 1476 aa20.39■□□□□ 0.85
ABCD4-206ENST00000470637 WDR62O43379 1518 aa20.36■□□□□ 0.85
ABCD4-206ENST00000470637 URB2Q14146 1524 aaKnown RBP20.23■□□□□ 0.83
ABCD4-206ENST00000470637 PRDM2Q13029 1718 aa20.18■□□□□ 0.82
ABCD4-206ENST00000470637 SUPT5HO00267 1087 aaKnown RBP20.1■□□□□ 0.81
ABCD4-206ENST00000470637 TOPBP1Q92547 1522 aa20.05■□□□□ 0.8
ABCD4-206ENST00000470637 ABCC8Q09428 1581 aa20■□□□□ 0.79
ABCD4-206ENST00000470637 IFT140Q96RY7 1462 aa19.98■□□□□ 0.79
ABCD4-206ENST00000470637 ZNF608Q9ULD9 1512 aaPredicted RBP19.97■□□□□ 0.79
ABCD4-206ENST00000470637 DNMBPQ6XZF7 1577 aa19.97■□□□□ 0.79
ABCD4-206ENST00000470637 OSCARQ8IYS5 282 aa19.92■□□□□ 0.78
ABCD4-206ENST00000470637 POLA1P09884 1462 aaPredicted RBP19.86■□□□□ 0.77
ABCD4-206ENST00000470637 TARBP1Q13395 1621 aaKnown RBP19.84■□□□□ 0.77
ABCD4-206ENST00000470637 AQRO60306 1485 aaKnown RBP eCLIP19.84■□□□□ 0.773e-8■■■■■ 38.7
ABCD4-206ENST00000470637 RAD54L2Q9Y4B4 1467 aa19.83■□□□□ 0.76
ABCD4-206ENST00000470637 SOGA1O94964 1423 aa19.82■□□□□ 0.76
ABCD4-206ENST00000470637 EIF4G3O43432 1585 aaKnown RBP19.81■□□□□ 0.76
ABCD4-206ENST00000470637 CUX1P39880 1505 aa19.8■□□□□ 0.76
ABCD4-206ENST00000470637 TRIM41Q8WV44 630 aa19.79■□□□□ 0.76
ABCD4-206ENST00000470637 FGD5Q6ZNL6 1462 aa19.78■□□□□ 0.76
ABCD4-206ENST00000470637 TDRD9Q8NDG6 1382 aaKnown RBP19.76■□□□□ 0.75
ABCD4-206ENST00000470637 FBLN2P98095 1184 aa19.7■□□□□ 0.74
ABCD4-206ENST00000470637 CHD1O14646 1710 aa19.62■□□□□ 0.73
ABCD4-206ENST00000470637 SNAPC4Q5SXM2 1469 aa19.6■□□□□ 0.73
ABCD4-206ENST00000470637 WDR97A6NE52 1622 aa19.58■□□□□ 0.73
ABCD4-206ENST00000470637 RIMBP3CA6NJZ7 1639 aa19.58■□□□□ 0.72
ABCD4-206ENST00000470637 RIMBP3BA6NNM3 1639 aa19.58■□□□□ 0.72
ABCD4-206ENST00000470637 RIMBP3Q9UFD9 1639 aa19.58■□□□□ 0.72
ABCD4-206ENST00000470637 GRIN2BQ13224 1484 aa19.57■□□□□ 0.72
ABCD4-206ENST00000470637 WRNQ14191 1432 aaPredicted RBP eCLIP19.57■□□□□ 0.72
ABCD4-206ENST00000470637 CHMP7Q8WUX9 453 aaPredicted RBP19.56■□□□□ 0.72
ABCD4-206ENST00000470637 GAPVD1Q14C86 1478 aa19.55■□□□□ 0.72
ABCD4-206ENST00000470637 ABCA10Q8WWZ4 1543 aa19.55■□□□□ 0.72
ABCD4-206ENST00000470637 ARHGEF11O15085 1522 aa19.54■□□□□ 0.72
ABCD4-206ENST00000470637 MAGI1Q96QZ7 1491 aaPredicted RBP19.53■□□□□ 0.72
ABCD4-206ENST00000470637 SYNJ1O43426 1573 aa19.53■□□□□ 0.72
ABCD4-206ENST00000470637 TOP2BQ02880 1626 aa19.51■□□□□ 0.71
ABCD4-206ENST00000470637 BIVM-ERCC5R4GMW8 1640 aa19.51■□□□□ 0.71
ABCD4-206ENST00000470637 CYB5RLQ6IPT4 315 aa19.48■□□□□ 0.71
ABCD4-206ENST00000470637 SYNJ2O15056 1496 aa19.48■□□□□ 0.71
ABCD4-206ENST00000470637 ABCA5Q8WWZ7 1642 aa19.47■□□□□ 0.71
ABCD4-206ENST00000470637 PBRM1Q86U86 1689 aa19.47■□□□□ 0.71
ABCD4-206ENST00000470637 CLASP1Q7Z460 1538 aa19.41■□□□□ 0.7
ABCD4-206ENST00000470637 ARAP1Q96P48 1450 aa19.37■□□□□ 0.69
ABCD4-206ENST00000470637 GRIN2AQ12879 1464 aa19.32■□□□□ 0.68
ABCD4-206ENST00000470637 ADAMTS12P58397 1594 aa19.31■□□□□ 0.68
ABCD4-206ENST00000470637 FHAD1B1AJZ9 1412 aa19.3■□□□□ 0.68
ABCD4-206ENST00000470637 ERICH3Q5RHP9 1530 aa19.29■□□□□ 0.68
ABCD4-206ENST00000470637 CEP170Q5SW79 1584 aa19.25■□□□□ 0.67
ABCD4-206ENST00000470637 NUP160Q12769 1436 aa19.25■□□□□ 0.67
ABCD4-206ENST00000470637 TRHP20396 242 aaPredicted RBP19.18■□□□□ 0.66
ABCD4-206ENST00000470637 ERCC6L2Q5T890 1561 aa19.18■□□□□ 0.66
ABCD4-206ENST00000470637 IGF1RP08069 1367 aa19.18■□□□□ 0.66
ABCD4-206ENST00000470637 KIF27Q86VH2 1401 aa19.17■□□□□ 0.66
ABCD4-206ENST00000470637 JPH4Q96JJ6 628 aa19.13■□□□□ 0.65
ABCD4-206ENST00000470637 SHROOM2Q13796 1616 aa19.1■□□□□ 0.65
ABCD4-206ENST00000470637 PRG4Q92954 1404 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms