RNA–Protein interactions for RNA: ENST00000455157.6

SSUH2-208, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 2

Gene SSUH2, Length 3,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-208ENST00000455157 NISCHQ9Y2I1 1504 aa21.65■■□□□ 1.06
SSUH2-208ENST00000455157 SHROOM4Q9ULL8 1493 aa19.48■□□□□ 0.71
SSUH2-208ENST00000455157 SUPT5HO00267 1087 aaKnown RBP19.36■□□□□ 0.69
SSUH2-208ENST00000455157 PELP1Q8IZL8 1130 aaKnown RBP19.19■□□□□ 0.66
SSUH2-208ENST00000455157 DCAF8L2P0C7V8 631 aa18.96■□□□□ 0.63
SSUH2-208ENST00000455157 HRCP23327 699 aa18.89■□□□□ 0.61
SSUH2-208ENST00000455157 PCGF6Q9BYE7 350 aa18.69■□□□□ 0.58
SSUH2-208ENST00000455157 MYT1Q01538 1121 aa18.64■□□□□ 0.57
SSUH2-208ENST00000455157 CHIC1Q5VXU3 224 aa18.57■□□□□ 0.56
SSUH2-208ENST00000455157 PPARGC1BQ86YN6 1023 aaKnown RBP18.41■□□□□ 0.54
SSUH2-208ENST00000455157 MYO15BQ96JP2 1530 aa18.38■□□□□ 0.53
SSUH2-208ENST00000455157 LOC105371045A0A1W2PR82 267 aa18.28■□□□□ 0.52
SSUH2-208ENST00000455157 ZCCHC6Q5VYS8 1495 aaKnown RBP18.28■□□□□ 0.52
SSUH2-208ENST00000455157 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
SSUH2-208ENST00000455157 EHMT2Q96KQ7 1210 aa18.09■□□□□ 0.49
SSUH2-208ENST00000455157 FAM9AQ8IZU1 332 aaPredicted RBP18■□□□□ 0.47
SSUH2-208ENST00000455157 TRIM26Q12899 539 aaPredicted RBP17.99■□□□□ 0.47
SSUH2-208ENST00000455157 CCDC180Q9P1Z9 1646 aa17.92■□□□□ 0.46
SSUH2-208ENST00000455157 DCAF1Q9Y4B6 1507 aa17.86■□□□□ 0.45
SSUH2-208ENST00000455157 TRIM41Q8WV44 630 aa17.85■□□□□ 0.45
SSUH2-208ENST00000455157 ZEB1P37275 1124 aaPredicted RBP17.74■□□□□ 0.43
SSUH2-208ENST00000455157 TTBK1Q5TCY1 1321 aaPredicted RBP17.71■□□□□ 0.43
SSUH2-208ENST00000455157 ACIN1Q9UKV3 1341 aaKnown RBP17.57■□□□□ 0.4
SSUH2-208ENST00000455157 CCER1Q8TC90 406 aaPredicted RBP17.48■□□□□ 0.39
SSUH2-208ENST00000455157 NEUROD1Q13562 356 aa17.46■□□□□ 0.39
SSUH2-208ENST00000455157 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.43■□□□□ 0.38
SSUH2-208ENST00000455157 GTF3C3Q9Y5Q9 886 aa17.41■□□□□ 0.38
SSUH2-208ENST00000455157 RSF1Q96T23 1441 aaPredicted RBP17.39■□□□□ 0.37
SSUH2-208ENST00000455157 SCRIBQ14160 1630 aa17.38■□□□□ 0.37
SSUH2-208ENST00000455157 BCL11AQ9H165 835 aa17.32■□□□□ 0.36
SSUH2-208ENST00000455157 ABCC9O60706 1549 aa17.28■□□□□ 0.36
SSUH2-208ENST00000455157 CENPBP07199 599 aaPredicted RBP17.24■□□□□ 0.35
SSUH2-208ENST00000455157 RB1CC1Q8TDY2 1594 aa17.23■□□□□ 0.35
SSUH2-208ENST00000455157 DIEXFQ68CQ4 756 aaKnown RBP17.18■□□□□ 0.34
SSUH2-208ENST00000455157 PRKCSHP14314 528 aaPredicted RBP17.13■□□□□ 0.33
SSUH2-208ENST00000455157 YTHDC1Q96MU7 727 aaKnown RBP17.12■□□□□ 0.33
SSUH2-208ENST00000455157 UBTFP17480 764 aaKnown RBP17.1■□□□□ 0.33
SSUH2-208ENST00000455157 CECR2Q9BXF3 1484 aa17.07■□□□□ 0.32
SSUH2-208ENST00000455157 RANGAP1P46060 587 aaPredicted RBP16.98■□□□□ 0.31
SSUH2-208ENST00000455157 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
SSUH2-208ENST00000455157 HNRNPUL2Q1KMD3 747 aaKnown RBP16.94■□□□□ 0.3
SSUH2-208ENST00000455157 ANP32EQ9BTT0 268 aa16.92■□□□□ 0.3
SSUH2-208ENST00000455157 ZNF316A6NFI3 1004 aaPredicted RBP16.87■□□□□ 0.29
SSUH2-208ENST00000455157 APLP2Q06481 763 aa16.86■□□□□ 0.29
SSUH2-208ENST00000455157 WIZO95785 1651 aa16.85■□□□□ 0.29
SSUH2-208ENST00000455157 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
SSUH2-208ENST00000455157 CEP162Q5TB80 1403 aa16.8■□□□□ 0.28
SSUH2-208ENST00000455157 ABCC8Q09428 1581 aa16.76■□□□□ 0.27
SSUH2-208ENST00000455157 CCDC88BA6NC98 1476 aa16.75■□□□□ 0.27
SSUH2-208ENST00000455157 SOGA1O94964 1423 aa16.73■□□□□ 0.27
SSUH2-208ENST00000455157 ERICH6Q7L0X2 663 aa16.72■□□□□ 0.27
SSUH2-208ENST00000455157 MIER1Q8N108 512 aa16.72■□□□□ 0.27
SSUH2-208ENST00000455157 NACADO15069 1562 aa16.71■□□□□ 0.26
SSUH2-208ENST00000455157 TNIKQ9UKE5 1360 aa16.65■□□□□ 0.26
SSUH2-208ENST00000455157 PABPN1Q86U42 306 aaKnown RBP eCLIP16.64■□□□□ 0.264e-7■■■□□ 16.6
SSUH2-208ENST00000455157 BAZ1AQ9NRL2 1556 aaPredicted RBP16.62■□□□□ 0.25
SSUH2-208ENST00000455157 RUSC2Q8N2Y8 1516 aa16.59■□□□□ 0.25
SSUH2-208ENST00000455157 WRNQ14191 1432 aaPredicted RBP eCLIP16.59■□□□□ 0.25
SSUH2-208ENST00000455157 TSHZ2Q9NRE2 1034 aa16.57■□□□□ 0.24
SSUH2-208ENST00000455157 GOLGA3Q08378 1498 aa16.52■□□□□ 0.24
SSUH2-208ENST00000455157 ITGAEP38570 1179 aa16.52■□□□□ 0.23
SSUH2-208ENST00000455157 EEA1Q15075 1411 aa16.49■□□□□ 0.23
SSUH2-208ENST00000455157 CLIP1P30622 1438 aa16.48■□□□□ 0.23
SSUH2-208ENST00000455157 TOP2AP11388 1531 aaKnown RBP16.48■□□□□ 0.23
SSUH2-208ENST00000455157 CLSPNQ9HAW4 1339 aa16.47■□□□□ 0.23
SSUH2-208ENST00000455157 SUPT16HQ9Y5B9 1047 aaKnown RBP16.46■□□□□ 0.23
SSUH2-208ENST00000455157 SMARCA2P51531 1590 aa16.41■□□□□ 0.22
SSUH2-208ENST00000455157 SMARCA4P51532 1647 aa16.38■□□□□ 0.21
SSUH2-208ENST00000455157 EIF4G1Q04637 1599 aaKnown RBP16.37■□□□□ 0.21
SSUH2-208ENST00000455157 CEP164Q9UPV0 1460 aa16.37■□□□□ 0.21
SSUH2-208ENST00000455157 VPS8Q8N3P4 1428 aa16.31■□□□□ 0.2
SSUH2-208ENST00000455157 BCANQ96GW7 911 aa16.3■□□□□ 0.2
SSUH2-208ENST00000455157 ATP1B4Q9UN42 357 aaPredicted RBP16.28■□□□□ 0.2
SSUH2-208ENST00000455157 RAPGEF2Q9Y4G8 1499 aa16.25■□□□□ 0.19
SSUH2-208ENST00000455157 KANK4Q5T7N3 995 aaPredicted RBP16.23■□□□□ 0.19
SSUH2-208ENST00000455157 DHX57Q6P158 1386 aaKnown RBP16.17■□□□□ 0.18
SSUH2-208ENST00000455157 SYNJ1O43426 1573 aa16.16■□□□□ 0.18
SSUH2-208ENST00000455157 FAM50AQ14320 339 aaKnown RBP16.15■□□□□ 0.18
SSUH2-208ENST00000455157 ANO8Q9HCE9 1232 aaPredicted RBP16.15■□□□□ 0.18
SSUH2-208ENST00000455157 DDX10Q13206 875 aaKnown RBP16.14■□□□□ 0.17
SSUH2-208ENST00000455157 NEFLP07196 543 aa16.14■□□□□ 0.17
SSUH2-208ENST00000455157 KCNH8Q96L42 1107 aa16.13■□□□□ 0.17
SSUH2-208ENST00000455157 BAZ1BQ9UIG0 1483 aaKnown RBP16.11■□□□□ 0.17
SSUH2-208ENST00000455157 HIRIP3Q9BW71 556 aaPredicted RBP16.11■□□□□ 0.17
SSUH2-208ENST00000455157 FKBP8Q14318 412 aa16.11■□□□□ 0.17
SSUH2-208ENST00000455157 KIF21BO75037 1637 aa16.1■□□□□ 0.17
SSUH2-208ENST00000455157 RBM19Q9Y4C8 960 aaKnown RBP16.09■□□□□ 0.17
SSUH2-208ENST00000455157 P3H3Q8IVL6 736 aa16.06■□□□□ 0.16
SSUH2-208ENST00000455157 UNC13AQ9UPW8 1703 aa16.06■□□□□ 0.16
SSUH2-208ENST00000455157 MSH5O43196 834 aa16.04■□□□□ 0.16
SSUH2-208ENST00000455157 TRIM52Q96A61 297 aa16.04■□□□□ 0.16
SSUH2-208ENST00000455157 SIN3AQ96ST3 1273 aa16.03■□□□□ 0.16
SSUH2-208ENST00000455157 CCNB3Q8WWL7 1395 aa16.03■□□□□ 0.16
SSUH2-208ENST00000455157 ATAD2BQ9ULI0 1458 aa16■□□□□ 0.15
SSUH2-208ENST00000455157 MYT1LQ9UL68 1186 aa15.97■□□□□ 0.15
SSUH2-208ENST00000455157 ANP32CO43423 234 aa15.97■□□□□ 0.15
SSUH2-208ENST00000455157 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.15
SSUH2-208ENST00000455157 DNAJC5BQ9UF47 199 aa15.96■□□□□ 0.15
SSUH2-208ENST00000455157 RAB3GAP2Q9H2M9 1393 aa15.96■□□□□ 0.15
SSUH2-208ENST00000455157 KIF27Q86VH2 1401 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms