RNA–Protein interactions for RNA: ENST00000188403.7

NR1H4-201, Transcript of nuclear receptor subfamily 1 group H member 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NR1H4, Length 1,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4-201ENST00000188403 NISCHQ9Y2I1 1504 aa26.43■■□□□ 1.82
NR1H4-201ENST00000188403 AEBP2Q6ZN18 517 aaPredicted RBP25.28■■□□□ 1.64
NR1H4-201ENST00000188403 CHIC1Q5VXU3 224 aa24.32■■□□□ 1.48
NR1H4-201ENST00000188403 CCDC180Q9P1Z9 1646 aa23.17■■□□□ 1.3
NR1H4-201ENST00000188403 ABCC9O60706 1549 aa22.23■■□□□ 1.15
NR1H4-201ENST00000188403 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
NR1H4-201ENST00000188403 DCAF1Q9Y4B6 1507 aa21.86■■□□□ 1.09
NR1H4-201ENST00000188403 DCAF8L2P0C7V8 631 aa21.83■■□□□ 1.08
NR1H4-201ENST00000188403 MYO15BQ96JP2 1530 aa21.75■■□□□ 1.07
NR1H4-201ENST00000188403 NACADO15069 1562 aa21.68■■□□□ 1.06
NR1H4-201ENST00000188403 SENP3Q9H4L4 574 aaPredicted RBP21.62■■□□□ 1.05
NR1H4-201ENST00000188403 RB1CC1Q8TDY2 1594 aa21.56■■□□□ 1.04
NR1H4-201ENST00000188403 PHF23Q9BUL5 403 aaPredicted RBP21.4■■□□□ 1.02
NR1H4-201ENST00000188403 SHROOM4Q9ULL8 1493 aa21.26■□□□□ 0.99
NR1H4-201ENST00000188403 SCRIBQ14160 1630 aa21.25■□□□□ 0.99
NR1H4-201ENST00000188403 UNC13AQ9UPW8 1703 aa21.09■□□□□ 0.97
NR1H4-201ENST00000188403 BICRAQ9NZM4 1560 aa20.97■□□□□ 0.95
NR1H4-201ENST00000188403 PABPN1Q86U42 306 aaKnown RBP eCLIP20.89■□□□□ 0.94
NR1H4-201ENST00000188403 CECR2Q9BXF3 1484 aa20.58■□□□□ 0.88
NR1H4-201ENST00000188403 MROH2BQ7Z745 1585 aa20.41■□□□□ 0.86
NR1H4-201ENST00000188403 BAZ1AQ9NRL2 1556 aaPredicted RBP20.41■□□□□ 0.86
NR1H4-201ENST00000188403 RSF1Q96T23 1441 aaPredicted RBP20.37■□□□□ 0.85
NR1H4-201ENST00000188403 SMARCA4P51532 1647 aa20.37■□□□□ 0.85
NR1H4-201ENST00000188403 EIF4G1Q04637 1599 aaKnown RBP20.34■□□□□ 0.85
NR1H4-201ENST00000188403 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
NR1H4-201ENST00000188403 FOXD1Q16676 465 aa20.2■□□□□ 0.82
NR1H4-201ENST00000188403 WIZO95785 1651 aa20.19■□□□□ 0.82
NR1H4-201ENST00000188403 PEG3Q9GZU2 1588 aa20.17■□□□□ 0.82
NR1H4-201ENST00000188403 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
NR1H4-201ENST00000188403 CC2D2AQ9P2K1 1620 aa20.11■□□□□ 0.81
NR1H4-201ENST00000188403 SMARCA2P51531 1590 aa20.09■□□□□ 0.81
NR1H4-201ENST00000188403 NCAPD3P42695 1498 aa20.04■□□□□ 0.8
NR1H4-201ENST00000188403 TOP2AP11388 1531 aaKnown RBP19.99■□□□□ 0.79
NR1H4-201ENST00000188403 DNAJC5BQ9UF47 199 aa19.98■□□□□ 0.79
NR1H4-201ENST00000188403 HMGXB3Q12766 1538 aa19.97■□□□□ 0.79
NR1H4-201ENST00000188403 BAZ1BQ9UIG0 1483 aaKnown RBP19.97■□□□□ 0.79
NR1H4-201ENST00000188403 CCDC88BA6NC98 1476 aa19.78■□□□□ 0.76
NR1H4-201ENST00000188403 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
NR1H4-201ENST00000188403 CFTRP13569 1480 aa19.49■□□□□ 0.71
NR1H4-201ENST00000188403 CADPSQ9ULU8 1353 aa19.49■□□□□ 0.71
NR1H4-201ENST00000188403 NESP48681 1621 aa19.43■□□□□ 0.7
NR1H4-201ENST00000188403 LAMC3Q9Y6N6 1575 aa19.38■□□□□ 0.69
NR1H4-201ENST00000188403 POTEDQ86YR6 584 aa19.36■□□□□ 0.69
NR1H4-201ENST00000188403 PRDM2Q13029 1718 aa19.29■□□□□ 0.68
NR1H4-201ENST00000188403 FANCD2Q9BXW9 1451 aa19.26■□□□□ 0.67
NR1H4-201ENST00000188403 ABCC8Q09428 1581 aa19.24■□□□□ 0.67
NR1H4-201ENST00000188403 PDS5BQ9NTI5 1447 aa19.24■□□□□ 0.67
NR1H4-201ENST00000188403 CEP164Q9UPV0 1460 aa19.16■□□□□ 0.66
NR1H4-201ENST00000188403 WRNQ14191 1432 aaPredicted RBP eCLIP19.16■□□□□ 0.66
NR1H4-201ENST00000188403 KIF21AQ7Z4S6 1674 aa19.15■□□□□ 0.66
NR1H4-201ENST00000188403 SYNJ1O43426 1573 aa19.11■□□□□ 0.65
NR1H4-201ENST00000188403 CUX1P39880 1505 aa19.1■□□□□ 0.65
NR1H4-201ENST00000188403 MSH5O43196 834 aa19.08■□□□□ 0.65
NR1H4-201ENST00000188403 TRIM41Q8WV44 630 aa19.07■□□□□ 0.64
NR1H4-201ENST00000188403 URB2Q14146 1524 aaKnown RBP19.06■□□□□ 0.64
NR1H4-201ENST00000188403 ERCC6Q03468 1493 aa19.06■□□□□ 0.64
NR1H4-201ENST00000188403 TOP2BQ02880 1626 aa19.04■□□□□ 0.64
NR1H4-201ENST00000188403 BIVM-ERCC5R4GMW8 1640 aa19.03■□□□□ 0.64
NR1H4-201ENST00000188403 MRC2Q9UBG0 1479 aa19.02■□□□□ 0.64
NR1H4-201ENST00000188403 TOPBP1Q92547 1522 aa19.02■□□□□ 0.63
NR1H4-201ENST00000188403 DNMBPQ6XZF7 1577 aa19.02■□□□□ 0.63
NR1H4-201ENST00000188403 THOC2Q8NI27 1593 aaKnown RBP18.98■□□□□ 0.63
NR1H4-201ENST00000188403 WDR62O43379 1518 aa18.95■□□□□ 0.62
NR1H4-201ENST00000188403 FGD5Q6ZNL6 1462 aa18.94■□□□□ 0.62
NR1H4-201ENST00000188403 POLA1P09884 1462 aaPredicted RBP18.91■□□□□ 0.62
NR1H4-201ENST00000188403 PPP6R1Q9UPN7 881 aa18.9■□□□□ 0.62
NR1H4-201ENST00000188403 ADRA2BP18089 450 aa18.88■□□□□ 0.61
NR1H4-201ENST00000188403 RAD54L2Q9Y4B4 1467 aa18.84■□□□□ 0.61
NR1H4-201ENST00000188403 CUX2O14529 1486 aa18.83■□□□□ 0.61
NR1H4-201ENST00000188403 SOGA1O94964 1423 aa18.82■□□□□ 0.6
NR1H4-201ENST00000188403 RUSC2Q8N2Y8 1516 aa18.78■□□□□ 0.6
NR1H4-201ENST00000188403 ABCA10Q8WWZ4 1543 aa18.77■□□□□ 0.6
NR1H4-201ENST00000188403 TARBP1Q13395 1621 aaKnown RBP18.76■□□□□ 0.59
NR1H4-201ENST00000188403 WDR97A6NE52 1622 aa18.73■□□□□ 0.59
NR1H4-201ENST00000188403 IFT140Q96RY7 1462 aa18.73■□□□□ 0.59
NR1H4-201ENST00000188403 PIAS4Q8N2W9 510 aaPredicted RBP18.73■□□□□ 0.59
NR1H4-201ENST00000188403 FAM9AQ8IZU1 332 aaPredicted RBP18.7■□□□□ 0.58
NR1H4-201ENST00000188403 KIF27Q86VH2 1401 aa18.69■□□□□ 0.58
NR1H4-201ENST00000188403 EEA1Q15075 1411 aa18.68■□□□□ 0.58
NR1H4-201ENST00000188403 ZNF608Q9ULD9 1512 aaPredicted RBP18.67■□□□□ 0.58
NR1H4-201ENST00000188403 TDRD9Q8NDG6 1382 aaKnown RBP18.67■□□□□ 0.58
NR1H4-201ENST00000188403 ABCA5Q8WWZ7 1642 aa18.64■□□□□ 0.57
NR1H4-201ENST00000188403 AQRO60306 1485 aaKnown RBP eCLIP18.62■□□□□ 0.57
NR1H4-201ENST00000188403 CSRNP3Q8WYN3 585 aa18.61■□□□□ 0.57
NR1H4-201ENST00000188403 GAPVD1Q14C86 1478 aa18.6■□□□□ 0.57
NR1H4-201ENST00000188403 IGF1RP08069 1367 aa18.6■□□□□ 0.57
NR1H4-201ENST00000188403 EIF4G3O43432 1585 aaKnown RBP18.57■□□□□ 0.56
NR1H4-201ENST00000188403 ERICH3Q5RHP9 1530 aa18.53■□□□□ 0.56
NR1H4-201ENST00000188403 PRXQ9BXM0 1461 aa18.53■□□□□ 0.56
NR1H4-201ENST00000188403 GRIN2BQ13224 1484 aa18.52■□□□□ 0.55
NR1H4-201ENST00000188403 PBRM1Q86U86 1689 aa18.49■□□□□ 0.55
NR1H4-201ENST00000188403 LOC105371045A0A1W2PR82 267 aa18.48■□□□□ 0.55
NR1H4-201ENST00000188403 CARMIL1Q5VZK9 1371 aa18.47■□□□□ 0.55
NR1H4-201ENST00000188403 KIF21BO75037 1637 aa18.47■□□□□ 0.55
NR1H4-201ENST00000188403 RAPGEF2Q9Y4G8 1499 aa18.45■□□□□ 0.54
NR1H4-201ENST00000188403 SNAPC4Q5SXM2 1469 aa18.45■□□□□ 0.54
NR1H4-201ENST00000188403 CUL7Q14999 1698 aa18.44■□□□□ 0.54
NR1H4-201ENST00000188403 EHMT2Q96KQ7 1210 aa18.43■□□□□ 0.54
NR1H4-201ENST00000188403 ADAMTS12P58397 1594 aa18.43■□□□□ 0.54
NR1H4-201ENST00000188403 FHAD1B1AJZ9 1412 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms