RNA–Protein interactions for RNA: ENST00000548884.5

NR1H4-206, Transcript of nuclear receptor subfamily 1 group H member 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NR1H4, Length 2,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4-206ENST00000548884 NISCHQ9Y2I1 1504 aa15.95■□□□□ 0.14
NR1H4-206ENST00000548884 CCDC180Q9P1Z9 1646 aa13.9□□□□□ -0.18
NR1H4-206ENST00000548884 ZCCHC6Q5VYS8 1495 aaKnown RBP13.45□□□□□ -0.26
NR1H4-206ENST00000548884 DCAF1Q9Y4B6 1507 aa13.23□□□□□ -0.29
NR1H4-206ENST00000548884 MYO15BQ96JP2 1530 aa13.03□□□□□ -0.32
NR1H4-206ENST00000548884 SHROOM4Q9ULL8 1493 aa13.02□□□□□ -0.32
NR1H4-206ENST00000548884 DCAF8L2P0C7V8 631 aa13.01□□□□□ -0.33
NR1H4-206ENST00000548884 ABCC9O60706 1549 aa12.94□□□□□ -0.34
NR1H4-206ENST00000548884 NACADO15069 1562 aa12.89□□□□□ -0.35
NR1H4-206ENST00000548884 SCRIBQ14160 1630 aa12.75□□□□□ -0.37
NR1H4-206ENST00000548884 RB1CC1Q8TDY2 1594 aa12.74□□□□□ -0.37
NR1H4-206ENST00000548884 SUPT5HO00267 1087 aaKnown RBP12.58□□□□□ -0.4
NR1H4-206ENST00000548884 UNC13AQ9UPW8 1703 aa12.51□□□□□ -0.41
NR1H4-206ENST00000548884 RSF1Q96T23 1441 aaPredicted RBP12.4□□□□□ -0.42
NR1H4-206ENST00000548884 CECR2Q9BXF3 1484 aa12.35□□□□□ -0.43
NR1H4-206ENST00000548884 BICRAQ9NZM4 1560 aa12.35□□□□□ -0.43
NR1H4-206ENST00000548884 BAZ1AQ9NRL2 1556 aaPredicted RBP12.32□□□□□ -0.44
NR1H4-206ENST00000548884 MROH2BQ7Z745 1585 aa12.31□□□□□ -0.44
NR1H4-206ENST00000548884 SMARCA4P51532 1647 aa12.25□□□□□ -0.45
NR1H4-206ENST00000548884 WIZO95785 1651 aa12.23□□□□□ -0.45
NR1H4-206ENST00000548884 PABPN1Q86U42 306 aaKnown RBP eCLIP12.18□□□□□ -0.46
NR1H4-206ENST00000548884 PELP1Q8IZL8 1130 aaKnown RBP12.17□□□□□ -0.46
NR1H4-206ENST00000548884 CHIC1Q5VXU3 224 aa12.15□□□□□ -0.46
NR1H4-206ENST00000548884 TOP2AP11388 1531 aaKnown RBP12.13□□□□□ -0.47
NR1H4-206ENST00000548884 PEG3Q9GZU2 1588 aa12.12□□□□□ -0.47
NR1H4-206ENST00000548884 SMARCA2P51531 1590 aa12.02□□□□□ -0.49
NR1H4-206ENST00000548884 EIF4G1Q04637 1599 aaKnown RBP12□□□□□ -0.49
NR1H4-206ENST00000548884 ATAD2BQ9ULI0 1458 aa11.99□□□□□ -0.49
NR1H4-206ENST00000548884 CCDC88BA6NC98 1476 aa11.97□□□□□ -0.49
NR1H4-206ENST00000548884 BAZ1BQ9UIG0 1483 aaKnown RBP11.93□□□□□ -0.5
NR1H4-206ENST00000548884 HMGXB3Q12766 1538 aa11.9□□□□□ -0.5
NR1H4-206ENST00000548884 MYT1Q01538 1121 aa11.89□□□□□ -0.51
NR1H4-206ENST00000548884 NCAPD3P42695 1498 aa11.87□□□□□ -0.51
NR1H4-206ENST00000548884 TRIM41Q8WV44 630 aa11.85□□□□□ -0.51
NR1H4-206ENST00000548884 ABCC8Q09428 1581 aa11.76□□□□□ -0.53
NR1H4-206ENST00000548884 CC2D2AQ9P2K1 1620 aa11.74□□□□□ -0.53
NR1H4-206ENST00000548884 HRCP23327 699 aa11.69□□□□□ -0.54
NR1H4-206ENST00000548884 WRNQ14191 1432 aaPredicted RBP eCLIP11.68□□□□□ -0.54
NR1H4-206ENST00000548884 PRDM2Q13029 1718 aa11.66□□□□□ -0.54
NR1H4-206ENST00000548884 CFTRP13569 1480 aa11.65□□□□□ -0.55
NR1H4-206ENST00000548884 LOC105371045A0A1W2PR82 267 aa11.64□□□□□ -0.55
NR1H4-206ENST00000548884 SYNJ1O43426 1573 aa11.64□□□□□ -0.55
NR1H4-206ENST00000548884 EEA1Q15075 1411 aa11.61□□□□□ -0.55
NR1H4-206ENST00000548884 BIVM-ERCC5R4GMW8 1640 aa11.6□□□□□ -0.55
NR1H4-206ENST00000548884 TOP2BQ02880 1626 aa11.6□□□□□ -0.55
NR1H4-206ENST00000548884 FAM9AQ8IZU1 332 aaPredicted RBP11.59□□□□□ -0.55
NR1H4-206ENST00000548884 CADPSQ9ULU8 1353 aa11.56□□□□□ -0.56
NR1H4-206ENST00000548884 SOGA1O94964 1423 aa11.55□□□□□ -0.56
NR1H4-206ENST00000548884 CUX1P39880 1505 aa11.51□□□□□ -0.57
NR1H4-206ENST00000548884 RUSC2Q8N2Y8 1516 aa11.49□□□□□ -0.57
NR1H4-206ENST00000548884 LAMC3Q9Y6N6 1575 aa11.47□□□□□ -0.57
NR1H4-206ENST00000548884 CSRNP3Q8WYN3 585 aa11.47□□□□□ -0.57
NR1H4-206ENST00000548884 KIF21BO75037 1637 aa11.47□□□□□ -0.57
NR1H4-206ENST00000548884 GOLGA3Q08378 1498 aa11.44□□□□□ -0.58
NR1H4-206ENST00000548884 FANCD2Q9BXW9 1451 aa11.44□□□□□ -0.58
NR1H4-206ENST00000548884 CEP164Q9UPV0 1460 aa11.43□□□□□ -0.58
NR1H4-206ENST00000548884 TNIKQ9UKE5 1360 aa11.42□□□□□ -0.58
NR1H4-206ENST00000548884 NESP48681 1621 aa11.4□□□□□ -0.58
NR1H4-206ENST00000548884 DNMBPQ6XZF7 1577 aa11.39□□□□□ -0.59
NR1H4-206ENST00000548884 EHMT2Q96KQ7 1210 aa11.39□□□□□ -0.59
NR1H4-206ENST00000548884 KIF27Q86VH2 1401 aa11.38□□□□□ -0.59
NR1H4-206ENST00000548884 PPARGC1BQ86YN6 1023 aaKnown RBP11.37□□□□□ -0.59
NR1H4-206ENST00000548884 ERICH3Q5RHP9 1530 aa11.36□□□□□ -0.59
NR1H4-206ENST00000548884 FGD5Q6ZNL6 1462 aa11.36□□□□□ -0.59
NR1H4-206ENST00000548884 CEP162Q5TB80 1403 aa11.36□□□□□ -0.59
NR1H4-206ENST00000548884 PDS5BQ9NTI5 1447 aa11.35□□□□□ -0.59
NR1H4-206ENST00000548884 PRXQ9BXM0 1461 aa11.34□□□□□ -0.59
NR1H4-206ENST00000548884 TOPBP1Q92547 1522 aa11.34□□□□□ -0.59
NR1H4-206ENST00000548884 SCAF1Q9H7N4 1312 aaKnown RBP11.33□□□□□ -0.6
NR1H4-206ENST00000548884 TTBK1Q5TCY1 1321 aaPredicted RBP11.33□□□□□ -0.6
NR1H4-206ENST00000548884 RAPGEF2Q9Y4G8 1499 aa11.32□□□□□ -0.6
NR1H4-206ENST00000548884 DNAJC5BQ9UF47 199 aa11.32□□□□□ -0.6
NR1H4-206ENST00000548884 CUX2O14529 1486 aa11.31□□□□□ -0.6
NR1H4-206ENST00000548884 UBTFP17480 764 aaKnown RBP11.31□□□□□ -0.6
NR1H4-206ENST00000548884 KIF21AQ7Z4S6 1674 aa11.31□□□□□ -0.6
NR1H4-206ENST00000548884 URB2Q14146 1524 aaKnown RBP11.29□□□□□ -0.6
NR1H4-206ENST00000548884 POLA1P09884 1462 aaPredicted RBP11.29□□□□□ -0.6
NR1H4-206ENST00000548884 ABCA10Q8WWZ4 1543 aa11.29□□□□□ -0.6
NR1H4-206ENST00000548884 WDR97A6NE52 1622 aa11.27□□□□□ -0.61
NR1H4-206ENST00000548884 TRIM26Q12899 539 aaPredicted RBP11.26□□□□□ -0.61
NR1H4-206ENST00000548884 PCGF6Q9BYE7 350 aa11.26□□□□□ -0.61
NR1H4-206ENST00000548884 CLIP1P30622 1438 aa11.24□□□□□ -0.61
NR1H4-206ENST00000548884 IGF1RP08069 1367 aa11.23□□□□□ -0.61
NR1H4-206ENST00000548884 RAD54L2Q9Y4B4 1467 aa11.23□□□□□ -0.61
NR1H4-206ENST00000548884 CUL7Q14999 1698 aa11.21□□□□□ -0.62
NR1H4-206ENST00000548884 MRC2Q9UBG0 1479 aa11.21□□□□□ -0.62
NR1H4-206ENST00000548884 ABCA5Q8WWZ7 1642 aa11.2□□□□□ -0.62
NR1H4-206ENST00000548884 CARMIL1Q5VZK9 1371 aa11.19□□□□□ -0.62
NR1H4-206ENST00000548884 VPS8Q8N3P4 1428 aa11.18□□□□□ -0.62
NR1H4-206ENST00000548884 TARBP1Q13395 1621 aaKnown RBP11.18□□□□□ -0.62
NR1H4-206ENST00000548884 WDR62O43379 1518 aa11.16□□□□□ -0.62
NR1H4-206ENST00000548884 GAPVD1Q14C86 1478 aa11.13□□□□□ -0.63
NR1H4-206ENST00000548884 ARAP1Q96P48 1450 aa11.13□□□□□ -0.63
NR1H4-206ENST00000548884 CTTNBP2Q8WZ74 1663 aa11.1□□□□□ -0.63
NR1H4-206ENST00000548884 THOC2Q8NI27 1593 aaKnown RBP11.1□□□□□ -0.63
NR1H4-206ENST00000548884 PBRM1Q86U86 1689 aa11.1□□□□□ -0.63
NR1H4-206ENST00000548884 ARHGAP35Q9NRY4 1499 aa11.1□□□□□ -0.63
NR1H4-206ENST00000548884 TDRD9Q8NDG6 1382 aaKnown RBP11.09□□□□□ -0.63
NR1H4-206ENST00000548884 IFT140Q96RY7 1462 aa11.09□□□□□ -0.63
NR1H4-206ENST00000548884 ERCC6Q03468 1493 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms