RNA–Protein interactions for RNA: ENST00000394199.6

NEK6-205, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-205ENST00000394199 NISCHQ9Y2I1 1504 aa24.85■■□□□ 1.57
NEK6-205ENST00000394199 SHROOM4Q9ULL8 1493 aa21.4■■□□□ 1.02
NEK6-205ENST00000394199 CCDC180Q9P1Z9 1646 aa21.31■■□□□ 1
NEK6-205ENST00000394199 SUPT5HO00267 1087 aaKnown RBP21.14■□□□□ 0.98
NEK6-205ENST00000394199 ZCCHC6Q5VYS8 1495 aaKnown RBP20.97■□□□□ 0.95
NEK6-205ENST00000394199 MYO15BQ96JP2 1530 aa20.72■□□□□ 0.91
NEK6-205ENST00000394199 HRCP23327 699 aa20.64■□□□□ 0.9
NEK6-205ENST00000394199 CHIC1Q5VXU3 224 aa20.62■□□□□ 0.89
NEK6-205ENST00000394199 PCGF6Q9BYE7 350 aa20.51■□□□□ 0.87
NEK6-205ENST00000394199 DCAF1Q9Y4B6 1507 aa20.5■□□□□ 0.87
NEK6-205ENST00000394199 PPARGC1BQ86YN6 1023 aaKnown RBP20.47■□□□□ 0.87
NEK6-205ENST00000394199 DCAF8L2P0C7V8 631 aa20.45■□□□□ 0.86
NEK6-205ENST00000394199 LOC105371045A0A1W2PR82 267 aa20.24■□□□□ 0.83
NEK6-205ENST00000394199 ABCC9O60706 1549 aa19.81■□□□□ 0.76
NEK6-205ENST00000394199 TRIM26Q12899 539 aaPredicted RBP19.8■□□□□ 0.76
NEK6-205ENST00000394199 SCRIBQ14160 1630 aa19.77■□□□□ 0.76
NEK6-205ENST00000394199 NACADO15069 1562 aa19.77■□□□□ 0.76
NEK6-205ENST00000394199 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
NEK6-205ENST00000394199 FAM9AQ8IZU1 332 aaPredicted RBP19.61■□□□□ 0.73
NEK6-205ENST00000394199 RSF1Q96T23 1441 aaPredicted RBP19.53■□□□□ 0.72
NEK6-205ENST00000394199 TRIM41Q8WV44 630 aa19.48■□□□□ 0.71
NEK6-205ENST00000394199 RB1CC1Q8TDY2 1594 aa19.47■□□□□ 0.71
NEK6-205ENST00000394199 SCAF1Q9H7N4 1312 aaKnown RBP19.42■□□□□ 0.7
NEK6-205ENST00000394199 ZEB1P37275 1124 aaPredicted RBP19.38■□□□□ 0.69
NEK6-205ENST00000394199 CECR2Q9BXF3 1484 aa19.33■□□□□ 0.68
NEK6-205ENST00000394199 MROH2BQ7Z745 1585 aa19.25■□□□□ 0.67
NEK6-205ENST00000394199 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.17■□□□□ 0.66
NEK6-205ENST00000394199 BAZ1AQ9NRL2 1556 aaPredicted RBP19.11■□□□□ 0.65
NEK6-205ENST00000394199 WIZO95785 1651 aa19.1■□□□□ 0.65
NEK6-205ENST00000394199 UNC13AQ9UPW8 1703 aa19.08■□□□□ 0.65
NEK6-205ENST00000394199 PELP1Q8IZL8 1130 aaKnown RBP19.07■□□□□ 0.64
NEK6-205ENST00000394199 TTBK1Q5TCY1 1321 aaPredicted RBP19.04■□□□□ 0.64
NEK6-205ENST00000394199 NEUROD1Q13562 356 aa19.03■□□□□ 0.64
NEK6-205ENST00000394199 CCER1Q8TC90 406 aaPredicted RBP19.01■□□□□ 0.63
NEK6-205ENST00000394199 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
NEK6-205ENST00000394199 ACIN1Q9UKV3 1341 aaKnown RBP18.96■□□□□ 0.63
NEK6-205ENST00000394199 BICRAQ9NZM4 1560 aa18.93■□□□□ 0.62
NEK6-205ENST00000394199 TOP2AP11388 1531 aaKnown RBP18.88■□□□□ 0.61
NEK6-205ENST00000394199 PABPN1Q86U42 306 aaKnown RBP eCLIP18.85■□□□□ 0.61
NEK6-205ENST00000394199 DIEXFQ68CQ4 756 aaKnown RBP18.85■□□□□ 0.61
NEK6-205ENST00000394199 GTF3C3Q9Y5Q9 886 aa18.85■□□□□ 0.61
NEK6-205ENST00000394199 EIF4G1Q04637 1599 aaKnown RBP18.8■□□□□ 0.6
NEK6-205ENST00000394199 CCDC88BA6NC98 1476 aa18.76■□□□□ 0.59
NEK6-205ENST00000394199 SMARCA2P51531 1590 aa18.74■□□□□ 0.59
NEK6-205ENST00000394199 ABCC8Q09428 1581 aa18.7■□□□□ 0.58
NEK6-205ENST00000394199 PEG3Q9GZU2 1588 aa18.69■□□□□ 0.58
NEK6-205ENST00000394199 CENPBP07199 599 aaPredicted RBP18.64■□□□□ 0.57
NEK6-205ENST00000394199 SOGA1O94964 1423 aa18.64■□□□□ 0.57
NEK6-205ENST00000394199 YTHDC1Q96MU7 727 aaKnown RBP18.63■□□□□ 0.57
NEK6-205ENST00000394199 CEP162Q5TB80 1403 aa18.62■□□□□ 0.57
NEK6-205ENST00000394199 RUSC2Q8N2Y8 1516 aa18.58■□□□□ 0.57
NEK6-205ENST00000394199 WRNQ14191 1432 aaPredicted RBP eCLIP18.56■□□□□ 0.56
NEK6-205ENST00000394199 ATAD2BQ9ULI0 1458 aa18.56■□□□□ 0.56
NEK6-205ENST00000394199 ZNF316A6NFI3 1004 aaPredicted RBP18.56■□□□□ 0.56
NEK6-205ENST00000394199 UBTFP17480 764 aaKnown RBP18.55■□□□□ 0.56
NEK6-205ENST00000394199 MIER1Q8N108 512 aa18.5■□□□□ 0.55
NEK6-205ENST00000394199 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
NEK6-205ENST00000394199 CSRNP3Q8WYN3 585 aa18.48■□□□□ 0.55
NEK6-205ENST00000394199 TNIKQ9UKE5 1360 aa18.48■□□□□ 0.55
NEK6-205ENST00000394199 BAZ1BQ9UIG0 1483 aaKnown RBP18.47■□□□□ 0.55
NEK6-205ENST00000394199 RANGAP1P46060 587 aaPredicted RBP18.34■□□□□ 0.53
NEK6-205ENST00000394199 EEA1Q15075 1411 aa18.33■□□□□ 0.52
NEK6-205ENST00000394199 NCAPD3P42695 1498 aa18.29■□□□□ 0.52
NEK6-205ENST00000394199 HMGXB3Q12766 1538 aa18.27■□□□□ 0.52
NEK6-205ENST00000394199 GOLGA3Q08378 1498 aa18.27■□□□□ 0.52
NEK6-205ENST00000394199 SYNJ1O43426 1573 aa18.24■□□□□ 0.51
NEK6-205ENST00000394199 CLIP1P30622 1438 aa18.17■□□□□ 0.5
NEK6-205ENST00000394199 CEP164Q9UPV0 1460 aa18.1■□□□□ 0.49
NEK6-205ENST00000394199 MYT1Q01538 1121 aa18.09■□□□□ 0.49
NEK6-205ENST00000394199 RAPGEF2Q9Y4G8 1499 aa18.09■□□□□ 0.49
NEK6-205ENST00000394199 TOP2BQ02880 1626 aa18.09■□□□□ 0.49
NEK6-205ENST00000394199 VPS8Q8N3P4 1428 aa18.09■□□□□ 0.49
NEK6-205ENST00000394199 APLP2Q06481 763 aa18.08■□□□□ 0.49
NEK6-205ENST00000394199 KIF21BO75037 1637 aa18.05■□□□□ 0.48
NEK6-205ENST00000394199 CFTRP13569 1480 aa18.04■□□□□ 0.48
NEK6-205ENST00000394199 BIVM-ERCC5R4GMW8 1640 aa18.04■□□□□ 0.48
NEK6-205ENST00000394199 KANK4Q5T7N3 995 aaPredicted RBP18.01■□□□□ 0.47
NEK6-205ENST00000394199 SUPT16HQ9Y5B9 1047 aaKnown RBP18■□□□□ 0.47
NEK6-205ENST00000394199 DHX57Q6P158 1386 aaKnown RBP18■□□□□ 0.47
NEK6-205ENST00000394199 KCNH8Q96L42 1107 aa17.96■□□□□ 0.47
NEK6-205ENST00000394199 CUX1P39880 1505 aa17.95■□□□□ 0.46
NEK6-205ENST00000394199 ITGAEP38570 1179 aa17.9■□□□□ 0.46
NEK6-205ENST00000394199 DNAJC5BQ9UF47 199 aa17.9■□□□□ 0.46
NEK6-205ENST00000394199 CC2D2AQ9P2K1 1620 aa17.89■□□□□ 0.45
NEK6-205ENST00000394199 CADPSQ9ULU8 1353 aa17.89■□□□□ 0.45
NEK6-205ENST00000394199 PRXQ9BXM0 1461 aa17.85■□□□□ 0.45
NEK6-205ENST00000394199 PRDM2Q13029 1718 aa17.85■□□□□ 0.45
NEK6-205ENST00000394199 TSHZ2Q9NRE2 1034 aa17.85■□□□□ 0.45
NEK6-205ENST00000394199 ARAP1Q96P48 1450 aa17.84■□□□□ 0.45
NEK6-205ENST00000394199 ERICH3Q5RHP9 1530 aa17.83■□□□□ 0.45
NEK6-205ENST00000394199 KIF27Q86VH2 1401 aa17.82■□□□□ 0.44
NEK6-205ENST00000394199 CLSPNQ9HAW4 1339 aa17.79■□□□□ 0.44
NEK6-205ENST00000394199 BCANQ96GW7 911 aa17.79■□□□□ 0.44
NEK6-205ENST00000394199 RRBP1Q9P2E9 1410 aaKnown RBP17.71■□□□□ 0.42
NEK6-205ENST00000394199 HIRIP3Q9BW71 556 aaPredicted RBP17.68■□□□□ 0.42
NEK6-205ENST00000394199 SIN3AQ96ST3 1273 aa17.68■□□□□ 0.42
NEK6-205ENST00000394199 FANCD2Q9BXW9 1451 aa17.68■□□□□ 0.42
NEK6-205ENST00000394199 CCNB3Q8WWL7 1395 aa17.68■□□□□ 0.42
NEK6-205ENST00000394199 DDX10Q13206 875 aaKnown RBP17.67■□□□□ 0.42
NEK6-205ENST00000394199 CUX2O14529 1486 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms