RNA–Protein interactions for RNA: ENST00000269919.10

PGPEP1-202, Transcript of pyroglutamyl-peptidase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGPEP1, Length 7,092 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGPEP1-202ENST00000269919 DCAF8L2P0C7V8 631 aa19.52■□□□□ 0.71
PGPEP1-202ENST00000269919 NISCHQ9Y2I1 1504 aa18.3■□□□□ 0.52
PGPEP1-202ENST00000269919 SUPT5HO00267 1087 aaKnown RBP18.21■□□□□ 0.5
PGPEP1-202ENST00000269919 SHROOM4Q9ULL8 1493 aa17.89■□□□□ 0.46
PGPEP1-202ENST00000269919 FAM9AQ8IZU1 332 aaPredicted RBP17.87■□□□□ 0.45
PGPEP1-202ENST00000269919 EHMT2Q96KQ7 1210 aa17.58■□□□□ 0.4
PGPEP1-202ENST00000269919 PELP1Q8IZL8 1130 aaKnown RBP17.52■□□□□ 0.4
PGPEP1-202ENST00000269919 PCGF6Q9BYE7 350 aa17.3■□□□□ 0.36
PGPEP1-202ENST00000269919 APLP2Q06481 763 aa17.21■□□□□ 0.35
PGPEP1-202ENST00000269919 ATP1B4Q9UN42 357 aaPredicted RBP17.11■□□□□ 0.33
PGPEP1-202ENST00000269919 MYT1LQ9UL68 1186 aa17.09■□□□□ 0.33
PGPEP1-202ENST00000269919 ZEB1P37275 1124 aaPredicted RBP17.09■□□□□ 0.33
PGPEP1-202ENST00000269919 TTBK1Q5TCY1 1321 aaPredicted RBP17.06■□□□□ 0.32
PGPEP1-202ENST00000269919 CENPBP07199 599 aaPredicted RBP17.03■□□□□ 0.32
PGPEP1-202ENST00000269919 RANGAP1P46060 587 aaPredicted RBP16.97■□□□□ 0.31
PGPEP1-202ENST00000269919 CCER1Q8TC90 406 aaPredicted RBP16.9■□□□□ 0.3
PGPEP1-202ENST00000269919 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
PGPEP1-202ENST00000269919 ERICH6Q7L0X2 663 aa16.83■□□□□ 0.28
PGPEP1-202ENST00000269919 CHIC1Q5VXU3 224 aa16.81■□□□□ 0.28
PGPEP1-202ENST00000269919 MYT1Q01538 1121 aa16.7■□□□□ 0.26
PGPEP1-202ENST00000269919 YTHDC1Q96MU7 727 aaKnown RBP16.66■□□□□ 0.26
PGPEP1-202ENST00000269919 HRCP23327 699 aa16.63■□□□□ 0.25
PGPEP1-202ENST00000269919 TRIM26Q12899 539 aaPredicted RBP16.6■□□□□ 0.25
PGPEP1-202ENST00000269919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.59■□□□□ 0.25
PGPEP1-202ENST00000269919 HNRNPUL2Q1KMD3 747 aaKnown RBP16.59■□□□□ 0.25
PGPEP1-202ENST00000269919 UBTFP17480 764 aaKnown RBP16.58■□□□□ 0.25
PGPEP1-202ENST00000269919 NEFLP07196 543 aa16.54■□□□□ 0.24
PGPEP1-202ENST00000269919 PPARGC1BQ86YN6 1023 aaKnown RBP16.5■□□□□ 0.23
PGPEP1-202ENST00000269919 SLC4A1APQ9BWU0 796 aaKnown RBP16.35■□□□□ 0.21
PGPEP1-202ENST00000269919 LOC105371045A0A1W2PR82 267 aa16.31■□□□□ 0.2
PGPEP1-202ENST00000269919 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
PGPEP1-202ENST00000269919 BCANQ96GW7 911 aa16.16■□□□□ 0.18
PGPEP1-202ENST00000269919 POLR3GLQ9BT43 218 aa16.13■□□□□ 0.17
PGPEP1-202ENST00000269919 ITGAEP38570 1179 aa16.1■□□□□ 0.17
PGPEP1-202ENST00000269919 DIEXFQ68CQ4 756 aaKnown RBP16.06■□□□□ 0.16
PGPEP1-202ENST00000269919 FBLN2P98095 1184 aa16.05■□□□□ 0.16
PGPEP1-202ENST00000269919 DAXXQ9UER7 740 aaPredicted RBP16■□□□□ 0.15
PGPEP1-202ENST00000269919 SLC24A1O60721 1099 aa15.98■□□□□ 0.15
PGPEP1-202ENST00000269919 ESF1Q9H501 851 aaKnown RBP15.91■□□□□ 0.14
PGPEP1-202ENST00000269919 CNGB1Q14028 1251 aaPredicted RBP15.85■□□□□ 0.13
PGPEP1-202ENST00000269919 GTF3C3Q9Y5Q9 886 aa15.85■□□□□ 0.13
PGPEP1-202ENST00000269919 RTL5Q5HYW3 569 aaPredicted RBP15.77■□□□□ 0.12
PGPEP1-202ENST00000269919 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.115e-7■□□□□ 11.2
PGPEP1-202ENST00000269919 FAM50AQ14320 339 aaKnown RBP15.71■□□□□ 0.11
PGPEP1-202ENST00000269919 ZNF316A6NFI3 1004 aaPredicted RBP15.7■□□□□ 0.1
PGPEP1-202ENST00000269919 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
PGPEP1-202ENST00000269919 ACIN1Q9UKV3 1341 aaKnown RBP15.67■□□□□ 0.1
PGPEP1-202ENST00000269919 NEUROD1Q13562 356 aa15.67■□□□□ 0.1
PGPEP1-202ENST00000269919 ABCC9O60706 1549 aa15.66■□□□□ 0.1
PGPEP1-202ENST00000269919 A0A0G2JS52 829 aa15.65■□□□□ 0.1
PGPEP1-202ENST00000269919 NPM1P06748 294 aaKnown RBP eCLIP15.64■□□□□ 0.09
PGPEP1-202ENST00000269919 STAG3Q9UJ98 1225 aa15.61■□□□□ 0.09
PGPEP1-202ENST00000269919 ANP32CO43423 234 aa15.61■□□□□ 0.09
PGPEP1-202ENST00000269919 TRIM52Q96A61 297 aa15.6■□□□□ 0.09
PGPEP1-202ENST00000269919 CLSPNQ9HAW4 1339 aa15.59■□□□□ 0.09
PGPEP1-202ENST00000269919 CDK11AQ9UQ88 783 aaPredicted RBP15.59■□□□□ 0.09
PGPEP1-202ENST00000269919 DCAF1Q9Y4B6 1507 aa15.48■□□□□ 0.07
PGPEP1-202ENST00000269919 BCL11AQ9H165 835 aa15.46■□□□□ 0.07
PGPEP1-202ENST00000269919 ZBTB47Q9UFB7 747 aaPredicted RBP15.45■□□□□ 0.06
PGPEP1-202ENST00000269919 TRHP20396 242 aaPredicted RBP15.43■□□□□ 0.06
PGPEP1-202ENST00000269919 ARID3CA6NKF2 412 aa15.41■□□□□ 0.06
PGPEP1-202ENST00000269919 ZNF326Q5BKZ1 582 aaKnown RBP15.4■□□□□ 0.06
PGPEP1-202ENST00000269919 AEBP2Q6ZN18 517 aaPredicted RBP15.4■□□□□ 0.06
PGPEP1-202ENST00000269919 NEFMP07197 916 aa15.39■□□□□ 0.05
PGPEP1-202ENST00000269919 PLEKHG5O94827 1062 aa15.38■□□□□ 0.05
PGPEP1-202ENST00000269919 SENP3Q9H4L4 574 aaPredicted RBP15.37■□□□□ 0.05
PGPEP1-202ENST00000269919 CSRNP3Q8WYN3 585 aa15.37■□□□□ 0.05
PGPEP1-202ENST00000269919 CHGAP10645 457 aaKnown RBP15.36■□□□□ 0.05
PGPEP1-202ENST00000269919 HAP1P54257 671 aaPredicted RBP15.35■□□□□ 0.05
PGPEP1-202ENST00000269919 C14orf37Q86TY3 774 aa15.33■□□□□ 0.04
PGPEP1-202ENST00000269919 ZBTB7CA1YPR0 619 aa15.33■□□□□ 0.04
PGPEP1-202ENST00000269919 ARID4BQ4LE39 1312 aaPredicted RBP15.31■□□□□ 0.04
PGPEP1-202ENST00000269919 ANP32AP39687 249 aaKnown RBP15.31■□□□□ 0.04
PGPEP1-202ENST00000269919 FKBP8Q14318 412 aa15.29■□□□□ 0.04
PGPEP1-202ENST00000269919 ZNF777Q9ULD5 760 aaPredicted RBP15.28■□□□□ 0.04
PGPEP1-202ENST00000269919 CANXP27824 592 aaKnown RBP15.25■□□□□ 0.03
PGPEP1-202ENST00000269919 P3H3Q8IVL6 736 aa15.24■□□□□ 0.03
PGPEP1-202ENST00000269919 ZCCHC6Q5VYS8 1495 aaKnown RBP15.23■□□□□ 0.03
PGPEP1-202ENST00000269919 NPM2Q86SE8 214 aaKnown RBP15.21■□□□□ 0.03
PGPEP1-202ENST00000269919 SCRIBQ14160 1630 aa15.17■□□□□ 0.02
PGPEP1-202ENST00000269919 TONSLQ96HA7 1378 aa15.15■□□□□ 0.02
PGPEP1-202ENST00000269919 HNRNPUQ00839 825 aaKnown RBP eCLIP15.13■□□□□ 0.01
PGPEP1-202ENST00000269919 DDX10Q13206 875 aaKnown RBP15.13■□□□□ 0.01
PGPEP1-202ENST00000269919 MYO15BQ96JP2 1530 aa15.12■□□□□ 0.01
PGPEP1-202ENST00000269919 MIER1Q8N108 512 aa15.08■□□□□ 0.01
PGPEP1-202ENST00000269919 NPHP1O15259 732 aa15.07■□□□□ 0
PGPEP1-202ENST00000269919 FAM9BQ8IZU0 186 aa15.07■□□□□ 0
PGPEP1-202ENST00000269919 PPP1R15AO75807 674 aaPredicted RBP15.02■□□□□ -0
PGPEP1-202ENST00000269919 ARXQ96QS3 562 aa15.02□□□□□ -0.01
PGPEP1-202ENST00000269919 CCDC180Q9P1Z9 1646 aa15.01□□□□□ -0.01
PGPEP1-202ENST00000269919 NBR1Q14596 966 aa14.98□□□□□ -0.01
PGPEP1-202ENST00000269919 EIF5BO60841 1220 aaKnown RBP14.98□□□□□ -0.01
PGPEP1-202ENST00000269919 CCDC136Q96JN2 1154 aa14.97□□□□□ -0.01
PGPEP1-202ENST00000269919 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.96□□□□□ -0.01
PGPEP1-202ENST00000269919 CHMP7Q8WUX9 453 aaPredicted RBP14.95□□□□□ -0.02
PGPEP1-202ENST00000269919 ANP32BQ92688 251 aaKnown RBP14.93□□□□□ -0.02
PGPEP1-202ENST00000269919 UPF2Q9HAU5 1272 aaKnown RBP14.93□□□□□ -0.02
PGPEP1-202ENST00000269919 ERCC6Q03468 1493 aa14.92□□□□□ -0.02
PGPEP1-202ENST00000269919 CLIP1P30622 1438 aa14.92□□□□□ -0.02
PGPEP1-202ENST00000269919 IRX6P78412 446 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms