RNA–Protein interactions for RNA: ENST00000551379.5

NR1H4-209, Transcript of nuclear receptor subfamily 1 group H member 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NR1H4, Length 1,489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4-209ENST00000551379 AEBP2Q6ZN18 517 aaPredicted RBP29.04■■■□□ 2.24
NR1H4-209ENST00000551379 CHIC1Q5VXU3 224 aa27.51■■■□□ 2
NR1H4-209ENST00000551379 SENP3Q9H4L4 574 aaPredicted RBP24.91■■□□□ 1.58
NR1H4-209ENST00000551379 PHF23Q9BUL5 403 aaPredicted RBP24.51■■□□□ 1.51
NR1H4-209ENST00000551379 FOXD1Q16676 465 aa23.16■■□□□ 1.3
NR1H4-209ENST00000551379 PLPPR3Q6T4P5 718 aa21.96■■□□□ 1.11
NR1H4-209ENST00000551379 MSH5O43196 834 aa21.83■■□□□ 1.08
NR1H4-209ENST00000551379 PIAS4Q8N2W9 510 aaPredicted RBP21.63■■□□□ 1.05
NR1H4-209ENST00000551379 PPP6R1Q9UPN7 881 aa21.49■■□□□ 1.03
NR1H4-209ENST00000551379 POTEDQ86YR6 584 aa21.46■■□□□ 1.03
NR1H4-209ENST00000551379 ADRA2BP18089 450 aa21.42■■□□□ 1.02
NR1H4-209ENST00000551379 SCAF1Q9H7N4 1312 aaKnown RBP19.75■□□□□ 0.75
NR1H4-209ENST00000551379 DMRT2Q9Y5R5 561 aa19.71■□□□□ 0.75
NR1H4-209ENST00000551379 MAPK8IP2Q13387 824 aaPredicted RBP19.69■□□□□ 0.74
NR1H4-209ENST00000551379 PPP4R3CPQ6ZMV5 832 aa19.17■□□□□ 0.66
NR1H4-209ENST00000551379 HOXD11P31277 338 aaPredicted RBP18.94■□□□□ 0.62
NR1H4-209ENST00000551379 CNKSR2Q8WXI2 1034 aa18.9■□□□□ 0.62
NR1H4-209ENST00000551379 DCAF8L1A6NGE4 600 aa18.85■□□□□ 0.61
NR1H4-209ENST00000551379 RNF216Q9NWF9 866 aaPredicted RBP18.77■□□□□ 0.59
NR1H4-209ENST00000551379 CACNB1Q02641 598 aaPredicted RBP18.76■□□□□ 0.59
NR1H4-209ENST00000551379 RNF39Q9H2S5 420 aa18.57■□□□□ 0.56
NR1H4-209ENST00000551379 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
NR1H4-209ENST00000551379 NISCHQ9Y2I1 1504 aa18.46■□□□□ 0.55
NR1H4-209ENST00000551379 DNAJC5BQ9UF47 199 aa18.4■□□□□ 0.54
NR1H4-209ENST00000551379 C1QBPQ07021 282 aaKnown RBP18.33■□□□□ 0.52
NR1H4-209ENST00000551379 NPM3O75607 178 aaKnown RBP18.12■□□□□ 0.49
NR1H4-209ENST00000551379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.01■□□□□ 0.471e-7■■■■□ 22
NR1H4-209ENST00000551379 KCNA4P22459 653 aa17.61■□□□□ 0.41
NR1H4-209ENST00000551379 U3KPZ7 1027 aaPredicted RBP17.6■□□□□ 0.41
NR1H4-209ENST00000551379 CAPN15O75808 1086 aa17.37■□□□□ 0.37
NR1H4-209ENST00000551379 SPINK5Q9NQ38 1064 aaPredicted RBP17.36■□□□□ 0.37
NR1H4-209ENST00000551379 SLC4A2P04920 1241 aa17.32■□□□□ 0.36
NR1H4-209ENST00000551379 DSG3P32926 999 aa17.31■□□□□ 0.36
NR1H4-209ENST00000551379 APLP2Q06481 763 aa17.24■□□□□ 0.35
NR1H4-209ENST00000551379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.17■□□□□ 0.34
NR1H4-209ENST00000551379 HNRNPUL2Q1KMD3 747 aaKnown RBP17.17■□□□□ 0.34
NR1H4-209ENST00000551379 ZNF219Q9P2Y4 722 aaPredicted RBP17.1■□□□□ 0.33
NR1H4-209ENST00000551379 TRHP20396 242 aaPredicted RBP17.05■□□□□ 0.32
NR1H4-209ENST00000551379 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
NR1H4-209ENST00000551379 ABCB7O75027 752 aa16.92■□□□□ 0.3
NR1H4-209ENST00000551379 MYCNP04198 464 aaPredicted RBP16.81■□□□□ 0.28
NR1H4-209ENST00000551379 POTEHQ6S545 545 aa16.81■□□□□ 0.28
NR1H4-209ENST00000551379 SLC4A1APQ9BWU0 796 aaKnown RBP16.64■□□□□ 0.25
NR1H4-209ENST00000551379 RBM42Q9BTD8 480 aaKnown RBP16.61■□□□□ 0.25
NR1H4-209ENST00000551379 POLA2Q14181 598 aa16.56■□□□□ 0.24
NR1H4-209ENST00000551379 FOXD4L1Q9NU39 408 aa16.54■□□□□ 0.24
NR1H4-209ENST00000551379 ZBTB12Q9Y330 459 aaPredicted RBP16.34■□□□□ 0.21
NR1H4-209ENST00000551379 ATF5Q9Y2D1 282 aaPredicted RBP16.32■□□□□ 0.2
NR1H4-209ENST00000551379 CHRDL2Q6WN34 429 aa16.24■□□□□ 0.19
NR1H4-209ENST00000551379 AKT1S1Q96B36 256 aa16.16■□□□□ 0.18
NR1H4-209ENST00000551379 ZBTB22O15209 634 aa16.16■□□□□ 0.18
NR1H4-209ENST00000551379 ATXN8OSP0DMR3 200 aa16.11■□□□□ 0.17
NR1H4-209ENST00000551379 OSCARQ8IYS5 282 aa16.03■□□□□ 0.16
NR1H4-209ENST00000551379 REM2Q8IYK8 340 aaPredicted RBP15.97■□□□□ 0.15
NR1H4-209ENST00000551379 CCDC180Q9P1Z9 1646 aa15.92■□□□□ 0.14
NR1H4-209ENST00000551379 FBLN2P98095 1184 aa15.83■□□□□ 0.12
NR1H4-209ENST00000551379 PITPNM1O00562 1244 aa15.79■□□□□ 0.12
NR1H4-209ENST00000551379 PIP4P2Q8N4L2 257 aa15.79■□□□□ 0.12
NR1H4-209ENST00000551379 SPDYE2BA6NHP3 402 aa15.78■□□□□ 0.12
NR1H4-209ENST00000551379 SPDYE6P0CI01 402 aa15.78■□□□□ 0.12
NR1H4-209ENST00000551379 SPDYE2Q495Y8 402 aa15.78■□□□□ 0.12
NR1H4-209ENST00000551379 FXR2P51116 673 aaKnown RBP eCLIP15.71■□□□□ 0.11
NR1H4-209ENST00000551379 SP7Q8TDD2 431 aaPredicted RBP15.71■□□□□ 0.1
NR1H4-209ENST00000551379 ZCCHC6Q5VYS8 1495 aaKnown RBP15.59■□□□□ 0.09
NR1H4-209ENST00000551379 MKRN4PQ13434 485 aaPredicted RBP15.59■□□□□ 0.09
NR1H4-209ENST00000551379 HAX1O00165 279 aa15.56■□□□□ 0.08
NR1H4-209ENST00000551379 SPDYE1Q8NFV5 336 aaPredicted RBP15.53■□□□□ 0.08
NR1H4-209ENST00000551379 SSUH2Q9Y2M2 353 aa15.52■□□□□ 0.08
NR1H4-209ENST00000551379 ZNF692Q9BU19 519 aaPredicted RBP15.52■□□□□ 0.07
NR1H4-209ENST00000551379 CLEC11AQ9Y240 323 aa15.44■□□□□ 0.06
NR1H4-209ENST00000551379 PRKAR2AP13861 404 aaKnown RBP15.39■□□□□ 0.05
NR1H4-209ENST00000551379 DCAF1Q9Y4B6 1507 aa15.33■□□□□ 0.04
NR1H4-209ENST00000551379 CSRNP3Q8WYN3 585 aa15.3■□□□□ 0.04
NR1H4-209ENST00000551379 SHROOM4Q9ULL8 1493 aa15.29■□□□□ 0.04
NR1H4-209ENST00000551379 EVX2Q03828 476 aa15.28■□□□□ 0.04
NR1H4-209ENST00000551379 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.03
NR1H4-209ENST00000551379 C19orf67A6NJJ6 358 aa15.2■□□□□ 0.02
NR1H4-209ENST00000551379 PRR29P0C7W0 189 aa15.2■□□□□ 0.02
NR1H4-209ENST00000551379 CHADLQ6NUI6 762 aa15.13■□□□□ 0.01
NR1H4-209ENST00000551379 DCAF8L2P0C7V8 631 aa15.1■□□□□ 0.01
NR1H4-209ENST00000551379 MYO15BQ96JP2 1530 aa15□□□□□ -0.01
NR1H4-209ENST00000551379 GABBR2O75899 941 aa15□□□□□ -0.01
NR1H4-209ENST00000551379 SUPT5HO00267 1087 aaKnown RBP14.99□□□□□ -0.01
NR1H4-209ENST00000551379 EHMT2Q96KQ7 1210 aa14.99□□□□□ -0.01
NR1H4-209ENST00000551379 FARP1Q9Y4F1 1045 aaPredicted RBP14.95□□□□□ -0.02
NR1H4-209ENST00000551379 STAG3Q9UJ98 1225 aa14.91□□□□□ -0.02
NR1H4-209ENST00000551379 CD44P16070 742 aaKnown RBP14.89□□□□□ -0.03
NR1H4-209ENST00000551379 CLCN6P51797 869 aa14.86□□□□□ -0.03
NR1H4-209ENST00000551379 SPDYE4A6NLX3 237 aa14.83□□□□□ -0.03
NR1H4-209ENST00000551379 CREBZFQ9NS37 354 aa14.76□□□□□ -0.05
NR1H4-209ENST00000551379 NACADO15069 1562 aa14.75□□□□□ -0.05
NR1H4-209ENST00000551379 LHX8Q68G74 356 aa14.72□□□□□ -0.05
NR1H4-209ENST00000551379 ZNF579Q8NAF0 562 aaKnown RBP14.69□□□□□ -0.06
NR1H4-209ENST00000551379 ABCC9O60706 1549 aa14.67□□□□□ -0.06
NR1H4-209ENST00000551379 ZRANB1Q9UGI0 708 aa14.66□□□□□ -0.06
NR1H4-209ENST00000551379 POTEIP0CG38 1075 aa14.64□□□□□ -0.07
NR1H4-209ENST00000551379 SCRIBQ14160 1630 aa14.63□□□□□ -0.07
NR1H4-209ENST00000551379 DCBLD2Q96PD2 775 aa14.59□□□□□ -0.07
NR1H4-209ENST00000551379 PAK3O75914 559 aaPredicted RBP14.57□□□□□ -0.08
NR1H4-209ENST00000551379 NPM1P06748 294 aaKnown RBP eCLIP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms