Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRIM42Q8IWZ5 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRIM42Q8IWZ5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.14■□□□□ 0.34
TRIM42Q8IWZ5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 KRT18P57-201ENST00000443599 1254 ntBASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 MTCL1P1-201ENST00000446207 792 ntBASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 AP002490.2-201ENST00000524791 560 ntBASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 AC097374.2-201ENST00000618617 1306 ntBASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRIM42Q8IWZ5 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 AC073508.3-201ENST00000619697 1419 ntBASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 EGFEM1P-202ENST00000431685 1563 ntBASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM42Q8IWZ5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRIM42Q8IWZ5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms