RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 NISCHQ9Y2I1 1504 aa35.01■■■■□ 3.2
VCAN-204ENST00000502527 CCDC180Q9P1Z9 1646 aa29.95■■■□□ 2.38
VCAN-204ENST00000502527 ZCCHC6Q5VYS8 1495 aaKnown RBP29.58■■■□□ 2.33
VCAN-204ENST00000502527 SHROOM4Q9ULL8 1493 aa29.44■■■□□ 2.3
VCAN-204ENST00000502527 DCAF8L2P0C7V8 631 aa28.87■■■□□ 2.21
VCAN-204ENST00000502527 DCAF1Q9Y4B6 1507 aa28.86■■■□□ 2.21
VCAN-204ENST00000502527 SUPT5HO00267 1087 aaKnown RBP28.82■■■□□ 2.2
VCAN-204ENST00000502527 MYO15BQ96JP2 1530 aa28.14■■■□□ 2.1
VCAN-204ENST00000502527 CHIC1Q5VXU3 224 aa28.01■■■□□ 2.07
VCAN-204ENST00000502527 ABCC9O60706 1549 aa27.86■■■□□ 2.05
VCAN-204ENST00000502527 SCRIBQ14160 1630 aa27.85■■■□□ 2.05
VCAN-204ENST00000502527 NACADO15069 1562 aa27.75■■■□□ 2.03
VCAN-204ENST00000502527 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2.01
VCAN-204ENST00000502527 RB1CC1Q8TDY2 1594 aa27.3■■□□□ 1.96
VCAN-204ENST00000502527 CECR2Q9BXF3 1484 aa27.21■■□□□ 1.95
VCAN-204ENST00000502527 MROH2BQ7Z745 1585 aa27.13■■□□□ 1.93
VCAN-204ENST00000502527 LOC105371045A0A1W2PR82 267 aa27.05■■□□□ 1.92
VCAN-204ENST00000502527 TRIM41Q8WV44 630 aa26.97■■□□□ 1.91
VCAN-204ENST00000502527 WIZO95785 1651 aa26.94■■□□□ 1.9
VCAN-204ENST00000502527 BAZ1AQ9NRL2 1556 aaPredicted RBP26.94■■□□□ 1.9
VCAN-204ENST00000502527 PCGF6Q9BYE7 350 aa26.84■■□□□ 1.89
VCAN-204ENST00000502527 HRCP23327 699 aa26.79■■□□□ 1.88
VCAN-204ENST00000502527 UNC13AQ9UPW8 1703 aa26.74■■□□□ 1.87
VCAN-204ENST00000502527 SMARCA4P51532 1647 aa26.69■■□□□ 1.86
VCAN-204ENST00000502527 TOP2AP11388 1531 aaKnown RBP26.64■■□□□ 1.86
VCAN-204ENST00000502527 FAM9AQ8IZU1 332 aaPredicted RBP26.59■■□□□ 1.85
VCAN-204ENST00000502527 EIF4G1Q04637 1599 aaKnown RBP26.56■■□□□ 1.84
VCAN-204ENST00000502527 TRIM26Q12899 539 aaPredicted RBP26.53■■□□□ 1.84
VCAN-204ENST00000502527 BICRAQ9NZM4 1560 aa26.48■■□□□ 1.83
VCAN-204ENST00000502527 CCDC88BA6NC98 1476 aa26.47■■□□□ 1.83
VCAN-204ENST00000502527 SMARCA2P51531 1590 aa26.43■■□□□ 1.82
VCAN-204ENST00000502527 PABPN1Q86U42 306 aaKnown RBP eCLIP26.42■■□□□ 1.82
VCAN-204ENST00000502527 PEG3Q9GZU2 1588 aa26.27■■□□□ 1.8
VCAN-204ENST00000502527 EHMT2Q96KQ7 1210 aa26.24■■□□□ 1.79
VCAN-204ENST00000502527 ABCC8Q09428 1581 aa26.23■■□□□ 1.79
VCAN-204ENST00000502527 PPARGC1BQ86YN6 1023 aaKnown RBP26.08■■□□□ 1.77
VCAN-204ENST00000502527 ATAD2BQ9ULI0 1458 aa26.07■■□□□ 1.76
VCAN-204ENST00000502527 EEA1Q15075 1411 aa26.02■■□□□ 1.76
VCAN-204ENST00000502527 BAZ1BQ9UIG0 1483 aaKnown RBP25.98■■□□□ 1.75
VCAN-204ENST00000502527 SOGA1O94964 1423 aa25.97■■□□□ 1.75
VCAN-204ENST00000502527 ZEB1P37275 1124 aaPredicted RBP25.94■■□□□ 1.74
VCAN-204ENST00000502527 WRNQ14191 1432 aaPredicted RBP eCLIP25.93■■□□□ 1.74
VCAN-204ENST00000502527 CSRNP3Q8WYN3 585 aa25.89■■□□□ 1.73
VCAN-204ENST00000502527 TNIKQ9UKE5 1360 aa25.86■■□□□ 1.73
VCAN-204ENST00000502527 CEP162Q5TB80 1403 aa25.81■■□□□ 1.72
VCAN-204ENST00000502527 RUSC2Q8N2Y8 1516 aa25.81■■□□□ 1.72
VCAN-204ENST00000502527 SYNJ1O43426 1573 aa25.76■■□□□ 1.71
VCAN-204ENST00000502527 GOLGA3Q08378 1498 aa25.74■■□□□ 1.71
VCAN-204ENST00000502527 UBTFP17480 764 aaKnown RBP25.7■■□□□ 1.71
VCAN-204ENST00000502527 NCAPD3P42695 1498 aa25.65■■□□□ 1.7
VCAN-204ENST00000502527 HMGXB3Q12766 1538 aa25.65■■□□□ 1.7
VCAN-204ENST00000502527 CEP164Q9UPV0 1460 aa25.63■■□□□ 1.69
VCAN-204ENST00000502527 KIF21BO75037 1637 aa25.6■■□□□ 1.69
VCAN-204ENST00000502527 TOP2BQ02880 1626 aa25.54■■□□□ 1.68
VCAN-204ENST00000502527 BIVM-ERCC5R4GMW8 1640 aa25.46■■□□□ 1.67
VCAN-204ENST00000502527 CLIP1P30622 1438 aa25.39■■□□□ 1.66
VCAN-204ENST00000502527 TTBK1Q5TCY1 1321 aaPredicted RBP25.38■■□□□ 1.65
VCAN-204ENST00000502527 RAPGEF2Q9Y4G8 1499 aa25.37■■□□□ 1.65
VCAN-204ENST00000502527 CCER1Q8TC90 406 aaPredicted RBP25.37■■□□□ 1.65
VCAN-204ENST00000502527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.36■■□□□ 1.65
VCAN-204ENST00000502527 CFTRP13569 1480 aa25.36■■□□□ 1.65
VCAN-204ENST00000502527 CUX1P39880 1505 aa25.29■■□□□ 1.64
VCAN-204ENST00000502527 VPS8Q8N3P4 1428 aa25.28■■□□□ 1.64
VCAN-204ENST00000502527 ERICH3Q5RHP9 1530 aa25.25■■□□□ 1.63
VCAN-204ENST00000502527 PRXQ9BXM0 1461 aa25.23■■□□□ 1.63
VCAN-204ENST00000502527 KIF27Q86VH2 1401 aa25.19■■□□□ 1.62
VCAN-204ENST00000502527 APLP2Q06481 763 aa25.16■■□□□ 1.62
VCAN-204ENST00000502527 PRDM2Q13029 1718 aa25.13■■□□□ 1.61
VCAN-204ENST00000502527 CADPSQ9ULU8 1353 aa25.12■■□□□ 1.61
VCAN-204ENST00000502527 RANGAP1P46060 587 aaPredicted RBP25.08■■□□□ 1.61
VCAN-204ENST00000502527 CC2D2AQ9P2K1 1620 aa25.02■■□□□ 1.6
VCAN-204ENST00000502527 ARAP1Q96P48 1450 aa24.99■■□□□ 1.59
VCAN-204ENST00000502527 HNRNPUL2Q1KMD3 747 aaKnown RBP24.94■■□□□ 1.58
VCAN-204ENST00000502527 CUX2O14529 1486 aa24.93■■□□□ 1.58
VCAN-204ENST00000502527 IGF1RP08069 1367 aa24.9■■□□□ 1.58
VCAN-204ENST00000502527 FGD5Q6ZNL6 1462 aa24.88■■□□□ 1.57
VCAN-204ENST00000502527 FANCD2Q9BXW9 1451 aa24.84■■□□□ 1.57
VCAN-204ENST00000502527 ARHGAP35Q9NRY4 1499 aa24.81■■□□□ 1.56
VCAN-204ENST00000502527 CARMIL1Q5VZK9 1371 aa24.79■■□□□ 1.56
VCAN-204ENST00000502527 KANK4Q5T7N3 995 aaPredicted RBP24.76■■□□□ 1.55
VCAN-204ENST00000502527 DIEXFQ68CQ4 756 aaKnown RBP24.75■■□□□ 1.55
VCAN-204ENST00000502527 DNMBPQ6XZF7 1577 aa24.73■■□□□ 1.55
VCAN-204ENST00000502527 RRBP1Q9P2E9 1410 aaKnown RBP24.67■■□□□ 1.54
VCAN-204ENST00000502527 ZNF316A6NFI3 1004 aaPredicted RBP24.67■■□□□ 1.54
VCAN-204ENST00000502527 TOPBP1Q92547 1522 aa24.65■■□□□ 1.54
VCAN-204ENST00000502527 ABCA10Q8WWZ4 1543 aa24.65■■□□□ 1.54
VCAN-204ENST00000502527 POLA1P09884 1462 aaPredicted RBP24.62■■□□□ 1.53
VCAN-204ENST00000502527 NESP48681 1621 aa24.62■■□□□ 1.53
VCAN-204ENST00000502527 MAP3K1Q13233 1512 aa24.61■■□□□ 1.53
VCAN-204ENST00000502527 CLSPNQ9HAW4 1339 aa24.6■■□□□ 1.53
VCAN-204ENST00000502527 RAD54L2Q9Y4B4 1467 aa24.6■■□□□ 1.53
VCAN-204ENST00000502527 LAMC3Q9Y6N6 1575 aa24.58■■□□□ 1.52
VCAN-204ENST00000502527 CCNB3Q8WWL7 1395 aa24.56■■□□□ 1.52
VCAN-204ENST00000502527 FHAD1B1AJZ9 1412 aa24.54■■□□□ 1.52
VCAN-204ENST00000502527 TIAM1Q13009 1591 aa24.53■■□□□ 1.52
VCAN-204ENST00000502527 DHX57Q6P158 1386 aaKnown RBP24.51■■□□□ 1.51
VCAN-204ENST00000502527 CUL7Q14999 1698 aa24.5■■□□□ 1.51
VCAN-204ENST00000502527 URB2Q14146 1524 aaKnown RBP24.46■■□□□ 1.51
VCAN-204ENST00000502527 LRRC9Q6ZRR7 1453 aa24.45■■□□□ 1.5
VCAN-204ENST00000502527 PDS5BQ9NTI5 1447 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms