RNA–Protein interactions for RNA: ENST00000452621.6

RCOR3-204, Transcript of REST corepressor 3, humanhuman

TSL 2 BASIC

Gene RCOR3, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCOR3-204ENST00000452621 NISCHQ9Y2I1 1504 aa36.01■■■■□ 3.36
RCOR3-204ENST00000452621 CCDC180Q9P1Z9 1646 aa32■■■□□ 2.71
RCOR3-204ENST00000452621 ABCC9O60706 1549 aa31.67■■■□□ 2.66
RCOR3-204ENST00000452621 DCAF8L2P0C7V8 631 aa30.26■■■□□ 2.43
RCOR3-204ENST00000452621 RB1CC1Q8TDY2 1594 aa30.25■■■□□ 2.43
RCOR3-204ENST00000452621 ZCCHC6Q5VYS8 1495 aaKnown RBP30.2■■■□□ 2.42
RCOR3-204ENST00000452621 NACADO15069 1562 aa30.17■■■□□ 2.42
RCOR3-204ENST00000452621 MYO15BQ96JP2 1530 aa29.91■■■□□ 2.38
RCOR3-204ENST00000452621 DCAF1Q9Y4B6 1507 aa29.71■■■□□ 2.35
RCOR3-204ENST00000452621 PABPN1Q86U42 306 aaKnown RBP eCLIP29.61■■■□□ 2.33
RCOR3-204ENST00000452621 UNC13AQ9UPW8 1703 aa29.59■■■□□ 2.33
RCOR3-204ENST00000452621 SHROOM4Q9ULL8 1493 aa29.59■■■□□ 2.33
RCOR3-204ENST00000452621 BICRAQ9NZM4 1560 aa29.44■■■□□ 2.3
RCOR3-204ENST00000452621 DNAJC5BQ9UF47 199 aa29.36■■■□□ 2.29
RCOR3-204ENST00000452621 SCRIBQ14160 1630 aa29.3■■■□□ 2.28
RCOR3-204ENST00000452621 SUPT5HO00267 1087 aaKnown RBP28.86■■■□□ 2.21
RCOR3-204ENST00000452621 EIF4G1Q04637 1599 aaKnown RBP28.65■■■□□ 2.18
RCOR3-204ENST00000452621 CC2D2AQ9P2K1 1620 aa28.59■■■□□ 2.17
RCOR3-204ENST00000452621 CECR2Q9BXF3 1484 aa28.44■■■□□ 2.14
RCOR3-204ENST00000452621 CHIC1Q5VXU3 224 aa28.04■■■□□ 2.08
RCOR3-204ENST00000452621 RSF1Q96T23 1441 aaPredicted RBP28■■■□□ 2.07
RCOR3-204ENST00000452621 SMARCA4P51532 1647 aa27.97■■■□□ 2.07
RCOR3-204ENST00000452621 ATAD2BQ9ULI0 1458 aa27.91■■■□□ 2.06
RCOR3-204ENST00000452621 NCAPD3P42695 1498 aa27.89■■■□□ 2.06
RCOR3-204ENST00000452621 BAZ1AQ9NRL2 1556 aaPredicted RBP27.88■■■□□ 2.05
RCOR3-204ENST00000452621 MROH2BQ7Z745 1585 aa27.79■■■□□ 2.04
RCOR3-204ENST00000452621 SMARCA2P51531 1590 aa27.79■■■□□ 2.04
RCOR3-204ENST00000452621 HMGXB3Q12766 1538 aa27.7■■■□□ 2.02
RCOR3-204ENST00000452621 PEG3Q9GZU2 1588 aa27.68■■■□□ 2.02
RCOR3-204ENST00000452621 BAZ1BQ9UIG0 1483 aaKnown RBP27.63■■■□□ 2.01
RCOR3-204ENST00000452621 WIZO95785 1651 aa27.5■■□□□ 1.99
RCOR3-204ENST00000452621 NESP48681 1621 aa27.37■■□□□ 1.97
RCOR3-204ENST00000452621 ERCC6Q03468 1493 aa27.25■■□□□ 1.95
RCOR3-204ENST00000452621 TOP2AP11388 1531 aaKnown RBP27.23■■□□□ 1.95
RCOR3-204ENST00000452621 TRIM41Q8WV44 630 aa27.14■■□□□ 1.94
RCOR3-204ENST00000452621 LAMC3Q9Y6N6 1575 aa27.14■■□□□ 1.94
RCOR3-204ENST00000452621 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
RCOR3-204ENST00000452621 CUX2O14529 1486 aa26.99■■□□□ 1.91
RCOR3-204ENST00000452621 PDS5BQ9NTI5 1447 aa26.99■■□□□ 1.91
RCOR3-204ENST00000452621 KIF21AQ7Z4S6 1674 aa26.95■■□□□ 1.91
RCOR3-204ENST00000452621 CCDC88BA6NC98 1476 aa26.94■■□□□ 1.9
RCOR3-204ENST00000452621 LOC105371045A0A1W2PR82 267 aa26.93■■□□□ 1.9
RCOR3-204ENST00000452621 THOC2Q8NI27 1593 aaKnown RBP26.92■■□□□ 1.9
RCOR3-204ENST00000452621 CFTRP13569 1480 aa26.88■■□□□ 1.89
RCOR3-204ENST00000452621 FANCD2Q9BXW9 1451 aa26.78■■□□□ 1.88
RCOR3-204ENST00000452621 MRC2Q9UBG0 1479 aa26.74■■□□□ 1.87
RCOR3-204ENST00000452621 CEP164Q9UPV0 1460 aa26.73■■□□□ 1.87
RCOR3-204ENST00000452621 WDR62O43379 1518 aa26.66■■□□□ 1.86
RCOR3-204ENST00000452621 FAM9AQ8IZU1 332 aaPredicted RBP26.58■■□□□ 1.85
RCOR3-204ENST00000452621 ABCC8Q09428 1581 aa26.55■■□□□ 1.84
RCOR3-204ENST00000452621 URB2Q14146 1524 aaKnown RBP26.55■■□□□ 1.84
RCOR3-204ENST00000452621 PRDM2Q13029 1718 aa26.53■■□□□ 1.84
RCOR3-204ENST00000452621 PCGF6Q9BYE7 350 aa26.51■■□□□ 1.83
RCOR3-204ENST00000452621 DNAJC5Q9H3Z4 198 aa26.5■■□□□ 1.83
RCOR3-204ENST00000452621 EEA1Q15075 1411 aa26.47■■□□□ 1.83
RCOR3-204ENST00000452621 TRIM26Q12899 539 aaPredicted RBP26.42■■□□□ 1.82
RCOR3-204ENST00000452621 HRCP23327 699 aa26.41■■□□□ 1.82
RCOR3-204ENST00000452621 WRNQ14191 1432 aaPredicted RBP eCLIP26.37■■□□□ 1.81
RCOR3-204ENST00000452621 TOPBP1Q92547 1522 aa26.33■■□□□ 1.8
RCOR3-204ENST00000452621 DNMBPQ6XZF7 1577 aa26.24■■□□□ 1.79
RCOR3-204ENST00000452621 SOGA1O94964 1423 aa26.21■■□□□ 1.79
RCOR3-204ENST00000452621 SYNJ1O43426 1573 aa26.19■■□□□ 1.78
RCOR3-204ENST00000452621 ZNF608Q9ULD9 1512 aaPredicted RBP26.17■■□□□ 1.78
RCOR3-204ENST00000452621 IFT140Q96RY7 1462 aa26.17■■□□□ 1.78
RCOR3-204ENST00000452621 CSRNP3Q8WYN3 585 aa26.16■■□□□ 1.78
RCOR3-204ENST00000452621 EHMT2Q96KQ7 1210 aa26.13■■□□□ 1.77
RCOR3-204ENST00000452621 TNIKQ9UKE5 1360 aa26.13■■□□□ 1.77
RCOR3-204ENST00000452621 POLA1P09884 1462 aaPredicted RBP26.11■■□□□ 1.77
RCOR3-204ENST00000452621 TOP2BQ02880 1626 aa26.09■■□□□ 1.77
RCOR3-204ENST00000452621 GOLGA3Q08378 1498 aa26.08■■□□□ 1.76
RCOR3-204ENST00000452621 CUX1P39880 1505 aa26.07■■□□□ 1.76
RCOR3-204ENST00000452621 BIVM-ERCC5R4GMW8 1640 aa26.05■■□□□ 1.76
RCOR3-204ENST00000452621 TARBP1Q13395 1621 aaKnown RBP26.04■■□□□ 1.76
RCOR3-204ENST00000452621 RAD54L2Q9Y4B4 1467 aa26.03■■□□□ 1.76
RCOR3-204ENST00000452621 RUSC2Q8N2Y8 1516 aa26.03■■□□□ 1.76
RCOR3-204ENST00000452621 KIF21BO75037 1637 aa26.03■■□□□ 1.76
RCOR3-204ENST00000452621 FGD5Q6ZNL6 1462 aa26■■□□□ 1.75
RCOR3-204ENST00000452621 CEP162Q5TB80 1403 aa26■■□□□ 1.75
RCOR3-204ENST00000452621 AQRO60306 1485 aaKnown RBP eCLIP25.99■■□□□ 1.758e-7■■■□□ 18
RCOR3-204ENST00000452621 EIF4G3O43432 1585 aaKnown RBP25.98■■□□□ 1.75
RCOR3-204ENST00000452621 TDRD9Q8NDG6 1382 aaKnown RBP25.91■■□□□ 1.74
RCOR3-204ENST00000452621 OSCARQ8IYS5 282 aa25.9■■□□□ 1.74
RCOR3-204ENST00000452621 UBTFP17480 764 aaKnown RBP25.88■■□□□ 1.73
RCOR3-204ENST00000452621 ZEB1P37275 1124 aaPredicted RBP25.84■■□□□ 1.73
RCOR3-204ENST00000452621 WDR97A6NE52 1622 aa25.74■■□□□ 1.71
RCOR3-204ENST00000452621 ERICH3Q5RHP9 1530 aa25.74■■□□□ 1.71
RCOR3-204ENST00000452621 ABCA10Q8WWZ4 1543 aa25.72■■□□□ 1.71
RCOR3-204ENST00000452621 FBLN2P98095 1184 aa25.72■■□□□ 1.71
RCOR3-204ENST00000452621 SNAPC4Q5SXM2 1469 aa25.7■■□□□ 1.71
RCOR3-204ENST00000452621 GRIN2BQ13224 1484 aa25.67■■□□□ 1.7
RCOR3-204ENST00000452621 CHD1O14646 1710 aa25.67■■□□□ 1.7
RCOR3-204ENST00000452621 GAPVD1Q14C86 1478 aa25.67■■□□□ 1.7
RCOR3-204ENST00000452621 KIF27Q86VH2 1401 aa25.66■■□□□ 1.7
RCOR3-204ENST00000452621 RAPGEF2Q9Y4G8 1499 aa25.66■■□□□ 1.7
RCOR3-204ENST00000452621 CLIP1P30622 1438 aa25.65■■□□□ 1.7
RCOR3-204ENST00000452621 PRXQ9BXM0 1461 aa25.64■■□□□ 1.7
RCOR3-204ENST00000452621 ABCA5Q8WWZ7 1642 aa25.63■■□□□ 1.69
RCOR3-204ENST00000452621 MAGI1Q96QZ7 1491 aaPredicted RBP25.61■■□□□ 1.69
RCOR3-204ENST00000452621 CHMP7Q8WUX9 453 aaPredicted RBP25.57■■□□□ 1.68
RCOR3-204ENST00000452621 PBRM1Q86U86 1689 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms