RNA–Protein interactions for RNA: ENST00000406961.5

NCOA1-205, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene NCOA1, Length 7,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-205ENST00000406961 DCAF8L2P0C7V8 631 aa28.24■■■□□ 2.11
NCOA1-205ENST00000406961 NISCHQ9Y2I1 1504 aa27.9■■■□□ 2.06
NCOA1-205ENST00000406961 SUPT5HO00267 1087 aaKnown RBP26.85■■□□□ 1.89
NCOA1-205ENST00000406961 SHROOM4Q9ULL8 1493 aa26.59■■□□□ 1.85
NCOA1-205ENST00000406961 EHMT2Q96KQ7 1210 aa25.79■■□□□ 1.72
NCOA1-205ENST00000406961 FAM9AQ8IZU1 332 aaPredicted RBP25.26■■□□□ 1.63
NCOA1-205ENST00000406961 APLP2Q06481 763 aa25.22■■□□□ 1.63
NCOA1-205ENST00000406961 TRIM41Q8WV44 630 aa24.91■■□□□ 1.58
NCOA1-205ENST00000406961 TTBK1Q5TCY1 1321 aaPredicted RBP24.89■■□□□ 1.58
NCOA1-205ENST00000406961 PCGF6Q9BYE7 350 aa24.83■■□□□ 1.57
NCOA1-205ENST00000406961 RANGAP1P46060 587 aaPredicted RBP24.73■■□□□ 1.55
NCOA1-205ENST00000406961 UBTFP17480 764 aaKnown RBP24.51■■□□□ 1.51
NCOA1-205ENST00000406961 PELP1Q8IZL8 1130 aaKnown RBP24.51■■□□□ 1.51
NCOA1-205ENST00000406961 ATP1B4Q9UN42 357 aaPredicted RBP24.44■■□□□ 1.5
NCOA1-205ENST00000406961 ZEB1P37275 1124 aaPredicted RBP24.35■■□□□ 1.49
NCOA1-205ENST00000406961 CCER1Q8TC90 406 aaPredicted RBP24.35■■□□□ 1.49
NCOA1-205ENST00000406961 PPARGC1BQ86YN6 1023 aaKnown RBP24.09■■□□□ 1.45
NCOA1-205ENST00000406961 CHIC1Q5VXU3 224 aa24.02■■□□□ 1.44
NCOA1-205ENST00000406961 CENPBP07199 599 aaPredicted RBP24■■□□□ 1.43
NCOA1-205ENST00000406961 ABCC9O60706 1549 aa23.93■■□□□ 1.42
NCOA1-205ENST00000406961 TRIM26Q12899 539 aaPredicted RBP23.93■■□□□ 1.42
NCOA1-205ENST00000406961 LOC105371045A0A1W2PR82 267 aa23.9■■□□□ 1.42
NCOA1-205ENST00000406961 PABPN1Q86U42 306 aaKnown RBP eCLIP23.74■■□□□ 1.39
NCOA1-205ENST00000406961 ITGAEP38570 1179 aa23.66■■□□□ 1.38
NCOA1-205ENST00000406961 YTHDC1Q96MU7 727 aaKnown RBP23.64■■□□□ 1.38
NCOA1-205ENST00000406961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.64■■□□□ 1.37
NCOA1-205ENST00000406961 HNRNPUL2Q1KMD3 747 aaKnown RBP23.64■■□□□ 1.37
NCOA1-205ENST00000406961 HRCP23327 699 aa23.56■■□□□ 1.36
NCOA1-205ENST00000406961 NEFLP07196 543 aa23.47■■□□□ 1.35
NCOA1-205ENST00000406961 ERICH6Q7L0X2 663 aa23.45■■□□□ 1.34
NCOA1-205ENST00000406961 MYT1LQ9UL68 1186 aa23.42■■□□□ 1.34
NCOA1-205ENST00000406961 POLR3GLQ9BT43 218 aa23.25■■□□□ 1.31
NCOA1-205ENST00000406961 FAM50AQ14320 339 aaKnown RBP23.15■■□□□ 1.3
NCOA1-205ENST00000406961 ZCCHC6Q5VYS8 1495 aaKnown RBP23.14■■□□□ 1.29
NCOA1-205ENST00000406961 SCRIBQ14160 1630 aa23.05■■□□□ 1.28
NCOA1-205ENST00000406961 CNGB1Q14028 1251 aaPredicted RBP23■■□□□ 1.27
NCOA1-205ENST00000406961 TRIM52Q96A61 297 aa22.96■■□□□ 1.27
NCOA1-205ENST00000406961 CSRNP3Q8WYN3 585 aa22.92■■□□□ 1.26
NCOA1-205ENST00000406961 DIEXFQ68CQ4 756 aaKnown RBP22.91■■□□□ 1.26
NCOA1-205ENST00000406961 FBLN2P98095 1184 aa22.89■■□□□ 1.26
NCOA1-205ENST00000406961 CCDC180Q9P1Z9 1646 aa22.89■■□□□ 1.26
NCOA1-205ENST00000406961 NEUROD1Q13562 356 aa22.86■■□□□ 1.25
NCOA1-205ENST00000406961 P3H3Q8IVL6 736 aa22.78■■□□□ 1.24
NCOA1-205ENST00000406961 SLC4A1APQ9BWU0 796 aaKnown RBP22.77■■□□□ 1.24
NCOA1-205ENST00000406961 ARID3CA6NKF2 412 aa22.66■■□□□ 1.22
NCOA1-205ENST00000406961 ZNF326Q5BKZ1 582 aaKnown RBP22.63■■□□□ 1.21
NCOA1-205ENST00000406961 DAXXQ9UER7 740 aaPredicted RBP22.62■■□□□ 1.21
NCOA1-205ENST00000406961 ZNF316A6NFI3 1004 aaPredicted RBP22.51■■□□□ 1.19
NCOA1-205ENST00000406961 ANP32CO43423 234 aa22.5■■□□□ 1.19
NCOA1-205ENST00000406961 RB1CC1Q8TDY2 1594 aa22.47■■□□□ 1.19
NCOA1-205ENST00000406961 ZNF777Q9ULD5 760 aaPredicted RBP22.47■■□□□ 1.19
NCOA1-205ENST00000406961 MYT1Q01538 1121 aa22.46■■□□□ 1.19
NCOA1-205ENST00000406961 CDK11AQ9UQ88 783 aaPredicted RBP22.44■■□□□ 1.18
NCOA1-205ENST00000406961 DCAF1Q9Y4B6 1507 aa22.4■■□□□ 1.18
NCOA1-205ENST00000406961 RSF1Q96T23 1441 aaPredicted RBP22.35■■□□□ 1.17
NCOA1-205ENST00000406961 CLSPNQ9HAW4 1339 aa22.32■■□□□ 1.16
NCOA1-205ENST00000406961 BCANQ96GW7 911 aa22.28■■□□□ 1.16
NCOA1-205ENST00000406961 NACADO15069 1562 aa22.28■■□□□ 1.16
NCOA1-205ENST00000406961 GTF3C3Q9Y5Q9 886 aa22.28■■□□□ 1.16
NCOA1-205ENST00000406961 TONSLQ96HA7 1378 aa22.17■■□□□ 1.14
NCOA1-205ENST00000406961 CLIP1P30622 1438 aa22.14■■□□□ 1.14
NCOA1-205ENST00000406961 CHIC2Q9UKJ5 165 aa22.11■■□□□ 1.13
NCOA1-205ENST00000406961 MYO15BQ96JP2 1530 aa22.09■■□□□ 1.13
NCOA1-205ENST00000406961 BAZ1BQ9UIG0 1483 aaKnown RBP22.09■■□□□ 1.13
NCOA1-205ENST00000406961 EEA1Q15075 1411 aa22.07■■□□□ 1.12
NCOA1-205ENST00000406961 RTL5Q5HYW3 569 aaPredicted RBP22.06■■□□□ 1.12
NCOA1-205ENST00000406961 CHMP7Q8WUX9 453 aaPredicted RBP22.06■■□□□ 1.12
NCOA1-205ENST00000406961 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.12
NCOA1-205ENST00000406961 NPM1P06748 294 aaKnown RBP eCLIP22.06■■□□□ 1.12
NCOA1-205ENST00000406961 MTUS2Q5JR59 1369 aa22.05■■□□□ 1.12
NCOA1-205ENST00000406961 ACIN1Q9UKV3 1341 aaKnown RBP22.05■■□□□ 1.12
NCOA1-205ENST00000406961 GOLGA3Q08378 1498 aa22.04■■□□□ 1.12
NCOA1-205ENST00000406961 CANXP27824 592 aaKnown RBP22.01■■□□□ 1.11
NCOA1-205ENST00000406961 CHGAP10645 457 aaKnown RBP21.99■■□□□ 1.11
NCOA1-205ENST00000406961 CEP162Q5TB80 1403 aa21.99■■□□□ 1.11
NCOA1-205ENST00000406961 NEFMP07197 916 aa21.98■■□□□ 1.11
NCOA1-205ENST00000406961 ESF1Q9H501 851 aaKnown RBP21.98■■□□□ 1.11
NCOA1-205ENST00000406961 ZBTB47Q9UFB7 747 aaPredicted RBP21.94■■□□□ 1.1
NCOA1-205ENST00000406961 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.94■■□□□ 1.15e-6■□□□□ 10.5
NCOA1-205ENST00000406961 DDX10Q13206 875 aaKnown RBP21.93■■□□□ 1.1
NCOA1-205ENST00000406961 BAZ1AQ9NRL2 1556 aaPredicted RBP21.93■■□□□ 1.1
NCOA1-205ENST00000406961 TSPY4P0CV99 314 aa21.93■■□□□ 1.1
NCOA1-205ENST00000406961 TSPY10P0CW01 314 aa21.93■■□□□ 1.1
NCOA1-205ENST00000406961 SLC24A1O60721 1099 aa21.91■■□□□ 1.1
NCOA1-205ENST00000406961 STAG3Q9UJ98 1225 aa21.91■■□□□ 1.1
NCOA1-205ENST00000406961 CECR2Q9BXF3 1484 aa21.9■■□□□ 1.1
NCOA1-205ENST00000406961 KIF27Q86VH2 1401 aa21.88■■□□□ 1.09
NCOA1-205ENST00000406961 TNIKQ9UKE5 1360 aa21.85■■□□□ 1.09
NCOA1-205ENST00000406961 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.09
NCOA1-205ENST00000406961 RRP7BPQ9NSQ0 103 aa21.81■■□□□ 1.08
NCOA1-205ENST00000406961 HNRNPUQ00839 825 aaKnown RBP eCLIP21.8■■□□□ 1.08
NCOA1-205ENST00000406961 FAM9BQ8IZU0 186 aa21.8■■□□□ 1.08
NCOA1-205ENST00000406961 BCL11AQ9H165 835 aa21.79■■□□□ 1.08
NCOA1-205ENST00000406961 KDM2AQ9Y2K7 1162 aa21.78■■□□□ 1.08
NCOA1-205ENST00000406961 PLPPR3Q6T4P5 718 aa21.76■■□□□ 1.07
NCOA1-205ENST00000406961 PLEKHD1A6NEE1 506 aa21.74■■□□□ 1.07
NCOA1-205ENST00000406961 FKBP8Q14318 412 aa21.74■■□□□ 1.07
NCOA1-205ENST00000406961 KCNH8Q96L42 1107 aa21.72■■□□□ 1.07
NCOA1-205ENST00000406961 HIRIP3Q9BW71 556 aaPredicted RBP21.68■■□□□ 1.06
NCOA1-205ENST00000406961 TMC1Q8TDI8 760 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms