RNA–Protein interactions for RNA: ENST00000313431.13

PDE4DIP-201, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 5,676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-201ENST00000313431 DCAF8L2P0C7V8 631 aa28.94■■■□□ 2.22
PDE4DIP-201ENST00000313431 NISCHQ9Y2I1 1504 aa28.41■■■□□ 2.14
PDE4DIP-201ENST00000313431 SUPT5HO00267 1087 aaKnown RBP27.07■■□□□ 1.92
PDE4DIP-201ENST00000313431 SHROOM4Q9ULL8 1493 aa26.86■■□□□ 1.89
PDE4DIP-201ENST00000313431 EHMT2Q96KQ7 1210 aa26.01■■□□□ 1.75
PDE4DIP-201ENST00000313431 FAM9AQ8IZU1 332 aaPredicted RBP25.67■■□□□ 1.7
PDE4DIP-201ENST00000313431 APLP2Q06481 763 aa25.42■■□□□ 1.66
PDE4DIP-201ENST00000313431 TRIM41Q8WV44 630 aa25.12■■□□□ 1.61
PDE4DIP-201ENST00000313431 RANGAP1P46060 587 aaPredicted RBP25.11■■□□□ 1.61
PDE4DIP-201ENST00000313431 PCGF6Q9BYE7 350 aa25.04■■□□□ 1.6
PDE4DIP-201ENST00000313431 ATP1B4Q9UN42 357 aaPredicted RBP25.02■■□□□ 1.6
PDE4DIP-201ENST00000313431 TTBK1Q5TCY1 1321 aaPredicted RBP25■■□□□ 1.59
PDE4DIP-201ENST00000313431 UBTFP17480 764 aaKnown RBP24.68■■□□□ 1.54
PDE4DIP-201ENST00000313431 MYT1LQ9UL68 1186 aa24.51■■□□□ 1.51
PDE4DIP-201ENST00000313431 CCER1Q8TC90 406 aaPredicted RBP24.47■■□□□ 1.51
PDE4DIP-201ENST00000313431 ZEB1P37275 1124 aaPredicted RBP24.46■■□□□ 1.51
PDE4DIP-201ENST00000313431 PELP1Q8IZL8 1130 aaKnown RBP24.38■■□□□ 1.49
PDE4DIP-201ENST00000313431 CHIC1Q5VXU3 224 aa24.36■■□□□ 1.49
PDE4DIP-201ENST00000313431 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.31■■□□□ 1.48
PDE4DIP-201ENST00000313431 HNRNPUL2Q1KMD3 747 aaKnown RBP24.31■■□□□ 1.48
PDE4DIP-201ENST00000313431 PPARGC1BQ86YN6 1023 aaKnown RBP24.3■■□□□ 1.48
PDE4DIP-201ENST00000313431 ABCC9O60706 1549 aa24.26■■□□□ 1.47
PDE4DIP-201ENST00000313431 LOC105371045A0A1W2PR82 267 aa24.22■■□□□ 1.47
PDE4DIP-201ENST00000313431 TRIM26Q12899 539 aaPredicted RBP24.14■■□□□ 1.46
PDE4DIP-201ENST00000313431 CENPBP07199 599 aaPredicted RBP24.02■■□□□ 1.44
PDE4DIP-201ENST00000313431 PABPN1Q86U42 306 aaKnown RBP eCLIP24.02■■□□□ 1.44
PDE4DIP-201ENST00000313431 HRCP23327 699 aa23.8■■□□□ 1.4
PDE4DIP-201ENST00000313431 ITGAEP38570 1179 aa23.79■■□□□ 1.4
PDE4DIP-201ENST00000313431 YTHDC1Q96MU7 727 aaKnown RBP23.69■■□□□ 1.38
PDE4DIP-201ENST00000313431 POLR3GLQ9BT43 218 aa23.63■■□□□ 1.37
PDE4DIP-201ENST00000313431 FBLN2P98095 1184 aa23.61■■□□□ 1.37
PDE4DIP-201ENST00000313431 ZCCHC6Q5VYS8 1495 aaKnown RBP23.56■■□□□ 1.36
PDE4DIP-201ENST00000313431 SLC4A1APQ9BWU0 796 aaKnown RBP23.53■■□□□ 1.36
PDE4DIP-201ENST00000313431 NEFLP07196 543 aa23.44■■□□□ 1.34
PDE4DIP-201ENST00000313431 SCRIBQ14160 1630 aa23.38■■□□□ 1.33
PDE4DIP-201ENST00000313431 CNGB1Q14028 1251 aaPredicted RBP23.37■■□□□ 1.33
PDE4DIP-201ENST00000313431 CCDC180Q9P1Z9 1646 aa23.35■■□□□ 1.33
PDE4DIP-201ENST00000313431 ERICH6Q7L0X2 663 aa23.32■■□□□ 1.32
PDE4DIP-201ENST00000313431 FAM50AQ14320 339 aaKnown RBP23.27■■□□□ 1.32
PDE4DIP-201ENST00000313431 CSRNP3Q8WYN3 585 aa23.19■■□□□ 1.3
PDE4DIP-201ENST00000313431 BCANQ96GW7 911 aa23.15■■□□□ 1.3
PDE4DIP-201ENST00000313431 DIEXFQ68CQ4 756 aaKnown RBP23.08■■□□□ 1.29
PDE4DIP-201ENST00000313431 PLPPR3Q6T4P5 718 aa23.06■■□□□ 1.28
PDE4DIP-201ENST00000313431 TRIM52Q96A61 297 aa23.04■■□□□ 1.28
PDE4DIP-201ENST00000313431 NEUROD1Q13562 356 aa22.99■■□□□ 1.27
PDE4DIP-201ENST00000313431 ARID3CA6NKF2 412 aa22.98■■□□□ 1.27
PDE4DIP-201ENST00000313431 P3H3Q8IVL6 736 aa22.98■■□□□ 1.27
PDE4DIP-201ENST00000313431 ESF1Q9H501 851 aaKnown RBP22.96■■□□□ 1.27
PDE4DIP-201ENST00000313431 NPM1P06748 294 aaKnown RBP eCLIP22.85■■□□□ 1.25
PDE4DIP-201ENST00000313431 SLC24A1O60721 1099 aa22.84■■□□□ 1.25
PDE4DIP-201ENST00000313431 ZNF326Q5BKZ1 582 aaKnown RBP22.8■■□□□ 1.24
PDE4DIP-201ENST00000313431 RB1CC1Q8TDY2 1594 aa22.8■■□□□ 1.24
PDE4DIP-201ENST00000313431 RSF1Q96T23 1441 aaPredicted RBP22.74■■□□□ 1.23
PDE4DIP-201ENST00000313431 DAXXQ9UER7 740 aaPredicted RBP22.72■■□□□ 1.23
PDE4DIP-201ENST00000313431 ZNF777Q9ULD5 760 aaPredicted RBP22.72■■□□□ 1.23
PDE4DIP-201ENST00000313431 DCAF1Q9Y4B6 1507 aa22.69■■□□□ 1.22
PDE4DIP-201ENST00000313431 ZNF316A6NFI3 1004 aaPredicted RBP22.69■■□□□ 1.22
PDE4DIP-201ENST00000313431 NACADO15069 1562 aa22.66■■□□□ 1.22
PDE4DIP-201ENST00000313431 STAG3Q9UJ98 1225 aa22.65■■□□□ 1.22
PDE4DIP-201ENST00000313431 ANP32CO43423 234 aa22.59■■□□□ 1.21
PDE4DIP-201ENST00000313431 CDK11AQ9UQ88 783 aaPredicted RBP22.58■■□□□ 1.21
PDE4DIP-201ENST00000313431 CHGAP10645 457 aaKnown RBP22.53■■□□□ 1.2
PDE4DIP-201ENST00000313431 CLSPNQ9HAW4 1339 aa22.53■■□□□ 1.2
PDE4DIP-201ENST00000313431 MYO15BQ96JP2 1530 aa22.49■■□□□ 1.19
PDE4DIP-201ENST00000313431 NEFMP07197 916 aa22.42■■□□□ 1.18
PDE4DIP-201ENST00000313431 BCL11AQ9H165 835 aa22.42■■□□□ 1.18
PDE4DIP-201ENST00000313431 GTF3C3Q9Y5Q9 886 aa22.42■■□□□ 1.18
PDE4DIP-201ENST00000313431 MYT1Q01538 1121 aa22.39■■□□□ 1.17
PDE4DIP-201ENST00000313431 CLIP1P30622 1438 aa22.39■■□□□ 1.17
PDE4DIP-201ENST00000313431 BAZ1BQ9UIG0 1483 aaKnown RBP22.37■■□□□ 1.17
PDE4DIP-201ENST00000313431 ZBTB47Q9UFB7 747 aaPredicted RBP22.37■■□□□ 1.17
PDE4DIP-201ENST00000313431 WRNQ14191 1432 aaPredicted RBP eCLIP22.35■■□□□ 1.171e-7■■■■■ 66.8
PDE4DIP-201ENST00000313431 EEA1Q15075 1411 aa22.34■■□□□ 1.17
PDE4DIP-201ENST00000313431 SCAF1Q9H7N4 1312 aaKnown RBP22.34■■□□□ 1.17
PDE4DIP-201ENST00000313431 CHMP7Q8WUX9 453 aaPredicted RBP22.33■■□□□ 1.17
PDE4DIP-201ENST00000313431 CECR2Q9BXF3 1484 aa22.32■■□□□ 1.16
PDE4DIP-201ENST00000313431 TONSLQ96HA7 1378 aa22.3■■□□□ 1.16
PDE4DIP-201ENST00000313431 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
PDE4DIP-201ENST00000313431 GOLGA3Q08378 1498 aa22.28■■□□□ 1.16
PDE4DIP-201ENST00000313431 CHIC2Q9UKJ5 165 aa22.28■■□□□ 1.16
PDE4DIP-201ENST00000313431 CEP162Q5TB80 1403 aa22.26■■□□□ 1.15
PDE4DIP-201ENST00000313431 A0A0G2JS52 829 aa22.25■■□□□ 1.15
PDE4DIP-201ENST00000313431 MTUS2Q5JR59 1369 aa22.24■■□□□ 1.15
PDE4DIP-201ENST00000313431 ACIN1Q9UKV3 1341 aaKnown RBP22.21■■□□□ 1.15
PDE4DIP-201ENST00000313431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.19■■□□□ 1.14
PDE4DIP-201ENST00000313431 PLEKHG5O94827 1062 aa22.16■■□□□ 1.14
PDE4DIP-201ENST00000313431 ARID4BQ4LE39 1312 aaPredicted RBP22.15■■□□□ 1.14
PDE4DIP-201ENST00000313431 TRHP20396 242 aaPredicted RBP22.15■■□□□ 1.14
PDE4DIP-201ENST00000313431 CANXP27824 592 aaKnown RBP22.15■■□□□ 1.14
PDE4DIP-201ENST00000313431 KIF27Q86VH2 1401 aa22.14■■□□□ 1.13
PDE4DIP-201ENST00000313431 TNIKQ9UKE5 1360 aa22.13■■□□□ 1.13
PDE4DIP-201ENST00000313431 DDX10Q13206 875 aaKnown RBP22.12■■□□□ 1.13
PDE4DIP-201ENST00000313431 SENP3Q9H4L4 574 aaPredicted RBP22.11■■□□□ 1.13
PDE4DIP-201ENST00000313431 C14orf37Q86TY3 774 aa22.1■■□□□ 1.13
PDE4DIP-201ENST00000313431 KCNH8Q96L42 1107 aa22.1■■□□□ 1.13
PDE4DIP-201ENST00000313431 CEP164Q9UPV0 1460 aa22.09■■□□□ 1.13
PDE4DIP-201ENST00000313431 TSPY4P0CV99 314 aa22.08■■□□□ 1.13
PDE4DIP-201ENST00000313431 TSPY10P0CW01 314 aa22.08■■□□□ 1.13
PDE4DIP-201ENST00000313431 MROH2BQ7Z745 1585 aa22.03■■□□□ 1.12
PDE4DIP-201ENST00000313431 ZBTB7CA1YPR0 619 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms