RNA–Protein interactions for RNA: ENST00000326974.8

KLHDC3-202, Transcript of kelch domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHDC3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-202ENST00000326974 NISCHQ9Y2I1 1504 aa37.28■■■■□ 3.56
KLHDC3-202ENST00000326974 CCDC180Q9P1Z9 1646 aa32.18■■■□□ 2.74
KLHDC3-202ENST00000326974 ZCCHC6Q5VYS8 1495 aaKnown RBP31.45■■■□□ 2.63
KLHDC3-202ENST00000326974 SHROOM4Q9ULL8 1493 aa30.99■■■□□ 2.55
KLHDC3-202ENST00000326974 DCAF1Q9Y4B6 1507 aa30.7■■■□□ 2.51
KLHDC3-202ENST00000326974 DCAF8L2P0C7V8 631 aa30.66■■■□□ 2.5
KLHDC3-202ENST00000326974 ABCC9O60706 1549 aa30.4■■■□□ 2.46
KLHDC3-202ENST00000326974 MYO15BQ96JP2 1530 aa30.09■■■□□ 2.41
KLHDC3-202ENST00000326974 SUPT5HO00267 1087 aaKnown RBP29.98■■■□□ 2.39
KLHDC3-202ENST00000326974 SCRIBQ14160 1630 aa29.86■■■□□ 2.37
KLHDC3-202ENST00000326974 NACADO15069 1562 aa29.81■■■□□ 2.36
KLHDC3-202ENST00000326974 RB1CC1Q8TDY2 1594 aa29.5■■■□□ 2.31
KLHDC3-202ENST00000326974 RSF1Q96T23 1441 aaPredicted RBP29.17■■■□□ 2.26
KLHDC3-202ENST00000326974 UNC13AQ9UPW8 1703 aa29.11■■■□□ 2.25
KLHDC3-202ENST00000326974 CECR2Q9BXF3 1484 aa29.06■■■□□ 2.24
KLHDC3-202ENST00000326974 CHIC1Q5VXU3 224 aa28.94■■■□□ 2.22
KLHDC3-202ENST00000326974 MROH2BQ7Z745 1585 aa28.93■■■□□ 2.22
KLHDC3-202ENST00000326974 WIZO95785 1651 aa28.74■■■□□ 2.19
KLHDC3-202ENST00000326974 BICRAQ9NZM4 1560 aa28.74■■■□□ 2.19
KLHDC3-202ENST00000326974 BAZ1AQ9NRL2 1556 aaPredicted RBP28.69■■■□□ 2.18
KLHDC3-202ENST00000326974 SMARCA4P51532 1647 aa28.58■■■□□ 2.17
KLHDC3-202ENST00000326974 PABPN1Q86U42 306 aaKnown RBP eCLIP28.57■■■□□ 2.16
KLHDC3-202ENST00000326974 TOP2AP11388 1531 aaKnown RBP28.34■■■□□ 2.13
KLHDC3-202ENST00000326974 EIF4G1Q04637 1599 aaKnown RBP28.22■■■□□ 2.11
KLHDC3-202ENST00000326974 SMARCA2P51531 1590 aa28.15■■■□□ 2.1
KLHDC3-202ENST00000326974 PEG3Q9GZU2 1588 aa28.13■■■□□ 2.09
KLHDC3-202ENST00000326974 CCDC88BA6NC98 1476 aa28.1■■■□□ 2.09
KLHDC3-202ENST00000326974 TRIM41Q8WV44 630 aa28.02■■■□□ 2.08
KLHDC3-202ENST00000326974 LOC105371045A0A1W2PR82 267 aa27.96■■■□□ 2.07
KLHDC3-202ENST00000326974 ATAD2BQ9ULI0 1458 aa27.95■■■□□ 2.07
KLHDC3-202ENST00000326974 BAZ1BQ9UIG0 1483 aaKnown RBP27.8■■■□□ 2.04
KLHDC3-202ENST00000326974 ABCC8Q09428 1581 aa27.8■■■□□ 2.04
KLHDC3-202ENST00000326974 FAM9AQ8IZU1 332 aaPredicted RBP27.7■■■□□ 2.02
KLHDC3-202ENST00000326974 HMGXB3Q12766 1538 aa27.56■■■□□ 2
KLHDC3-202ENST00000326974 NCAPD3P42695 1498 aa27.54■■■□□ 2
KLHDC3-202ENST00000326974 CC2D2AQ9P2K1 1620 aa27.51■■□□□ 1.99
KLHDC3-202ENST00000326974 EHMT2Q96KQ7 1210 aa27.39■■□□□ 1.98
KLHDC3-202ENST00000326974 WRNQ14191 1432 aaPredicted RBP eCLIP27.39■■□□□ 1.988e-8■■■■■ 71
KLHDC3-202ENST00000326974 SYNJ1O43426 1573 aa27.38■■□□□ 1.97
KLHDC3-202ENST00000326974 SOGA1O94964 1423 aa27.34■■□□□ 1.97
KLHDC3-202ENST00000326974 RUSC2Q8N2Y8 1516 aa27.27■■□□□ 1.96
KLHDC3-202ENST00000326974 DNAJC5BQ9UF47 199 aa27.24■■□□□ 1.95
KLHDC3-202ENST00000326974 PCGF6Q9BYE7 350 aa27.18■■□□□ 1.94
KLHDC3-202ENST00000326974 EEA1Q15075 1411 aa27.13■■□□□ 1.93
KLHDC3-202ENST00000326974 CFTRP13569 1480 aa27.12■■□□□ 1.93
KLHDC3-202ENST00000326974 TOP2BQ02880 1626 aa27.12■■□□□ 1.93
KLHDC3-202ENST00000326974 BIVM-ERCC5R4GMW8 1640 aa27.09■■□□□ 1.93
KLHDC3-202ENST00000326974 PRDM2Q13029 1718 aa27.03■■□□□ 1.92
KLHDC3-202ENST00000326974 CSRNP3Q8WYN3 585 aa27.03■■□□□ 1.92
KLHDC3-202ENST00000326974 CUX1P39880 1505 aa27■■□□□ 1.91
KLHDC3-202ENST00000326974 GOLGA3Q08378 1498 aa26.91■■□□□ 1.9
KLHDC3-202ENST00000326974 TNIKQ9UKE5 1360 aa26.9■■□□□ 1.9
KLHDC3-202ENST00000326974 TRIM26Q12899 539 aaPredicted RBP26.9■■□□□ 1.9
KLHDC3-202ENST00000326974 KIF21BO75037 1637 aa26.89■■□□□ 1.9
KLHDC3-202ENST00000326974 CADPSQ9ULU8 1353 aa26.89■■□□□ 1.89
KLHDC3-202ENST00000326974 CEP162Q5TB80 1403 aa26.89■■□□□ 1.89
KLHDC3-202ENST00000326974 CEP164Q9UPV0 1460 aa26.83■■□□□ 1.89
KLHDC3-202ENST00000326974 HRCP23327 699 aa26.78■■□□□ 1.88
KLHDC3-202ENST00000326974 UBTFP17480 764 aaKnown RBP26.75■■□□□ 1.87
KLHDC3-202ENST00000326974 RAPGEF2Q9Y4G8 1499 aa26.74■■□□□ 1.87
KLHDC3-202ENST00000326974 NESP48681 1621 aa26.69■■□□□ 1.86
KLHDC3-202ENST00000326974 PPARGC1BQ86YN6 1023 aaKnown RBP26.67■■□□□ 1.86
KLHDC3-202ENST00000326974 FANCD2Q9BXW9 1451 aa26.66■■□□□ 1.86
KLHDC3-202ENST00000326974 PRXQ9BXM0 1461 aa26.62■■□□□ 1.85
KLHDC3-202ENST00000326974 KIF27Q86VH2 1401 aa26.58■■□□□ 1.85
KLHDC3-202ENST00000326974 FGD5Q6ZNL6 1462 aa26.58■■□□□ 1.85
KLHDC3-202ENST00000326974 ERICH3Q5RHP9 1530 aa26.57■■□□□ 1.84
KLHDC3-202ENST00000326974 CLIP1P30622 1438 aa26.52■■□□□ 1.84
KLHDC3-202ENST00000326974 LAMC3Q9Y6N6 1575 aa26.51■■□□□ 1.84
KLHDC3-202ENST00000326974 DNMBPQ6XZF7 1577 aa26.49■■□□□ 1.83
KLHDC3-202ENST00000326974 CUX2O14529 1486 aa26.49■■□□□ 1.83
KLHDC3-202ENST00000326974 TOPBP1Q92547 1522 aa26.44■■□□□ 1.82
KLHDC3-202ENST00000326974 POLA1P09884 1462 aaPredicted RBP26.38■■□□□ 1.81
KLHDC3-202ENST00000326974 IGF1RP08069 1367 aa26.37■■□□□ 1.81
KLHDC3-202ENST00000326974 URB2Q14146 1524 aaKnown RBP26.36■■□□□ 1.81
KLHDC3-202ENST00000326974 RAD54L2Q9Y4B4 1467 aa26.36■■□□□ 1.81
KLHDC3-202ENST00000326974 TTBK1Q5TCY1 1321 aaPredicted RBP26.35■■□□□ 1.81
KLHDC3-202ENST00000326974 VPS8Q8N3P4 1428 aa26.35■■□□□ 1.81
KLHDC3-202ENST00000326974 KIF21AQ7Z4S6 1674 aa26.33■■□□□ 1.81
KLHDC3-202ENST00000326974 RANGAP1P46060 587 aaPredicted RBP26.33■■□□□ 1.81
KLHDC3-202ENST00000326974 PDS5BQ9NTI5 1447 aa26.3■■□□□ 1.8
KLHDC3-202ENST00000326974 ABCA10Q8WWZ4 1543 aa26.29■■□□□ 1.8
KLHDC3-202ENST00000326974 ARAP1Q96P48 1450 aa26.28■■□□□ 1.8
KLHDC3-202ENST00000326974 WDR97A6NE52 1622 aa26.25■■□□□ 1.79
KLHDC3-202ENST00000326974 CARMIL1Q5VZK9 1371 aa26.21■■□□□ 1.79
KLHDC3-202ENST00000326974 ARHGAP35Q9NRY4 1499 aa26.15■■□□□ 1.78
KLHDC3-202ENST00000326974 ABCA5Q8WWZ7 1642 aa26.1■■□□□ 1.77
KLHDC3-202ENST00000326974 ERCC6Q03468 1493 aa26.08■■□□□ 1.77
KLHDC3-202ENST00000326974 CUL7Q14999 1698 aa26.07■■□□□ 1.76
KLHDC3-202ENST00000326974 TARBP1Q13395 1621 aaKnown RBP26.04■■□□□ 1.76
KLHDC3-202ENST00000326974 TDRD9Q8NDG6 1382 aaKnown RBP26.01■■□□□ 1.75
KLHDC3-202ENST00000326974 MRC2Q9UBG0 1479 aa26■■□□□ 1.75
KLHDC3-202ENST00000326974 GAPVD1Q14C86 1478 aa25.95■■□□□ 1.75
KLHDC3-202ENST00000326974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.94■■□□□ 1.74
KLHDC3-202ENST00000326974 ZEB1P37275 1124 aaPredicted RBP25.94■■□□□ 1.74
KLHDC3-202ENST00000326974 APLP2Q06481 763 aa25.94■■□□□ 1.74
KLHDC3-202ENST00000326974 THOC2Q8NI27 1593 aaKnown RBP25.93■■□□□ 1.74
KLHDC3-202ENST00000326974 CTTNBP2Q8WZ74 1663 aa25.93■■□□□ 1.74
KLHDC3-202ENST00000326974 WDR62O43379 1518 aa25.89■■□□□ 1.73
KLHDC3-202ENST00000326974 KANK4Q5T7N3 995 aaPredicted RBP25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms