RNA–Protein interactions for RNA: ENST00000348295.7

CHEK2-202, Transcript of checkpoint kinase 2, humanhuman

TSL 5 BASIC

Gene CHEK2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-202ENST00000348295 NISCHQ9Y2I1 1504 aa42.04■■■■■ 4.32
CHEK2-202ENST00000348295 CCDC180Q9P1Z9 1646 aa37.01■■■■□ 3.52
CHEK2-202ENST00000348295 ABCC9O60706 1549 aa35.59■■■■□ 3.29
CHEK2-202ENST00000348295 ZCCHC6Q5VYS8 1495 aaKnown RBP35.18■■■■□ 3.22
CHEK2-202ENST00000348295 DCAF8L2P0C7V8 631 aa34.86■■■■□ 3.17
CHEK2-202ENST00000348295 DCAF1Q9Y4B6 1507 aa34.69■■■■□ 3.14
CHEK2-202ENST00000348295 NACADO15069 1562 aa34.55■■■■□ 3.12
CHEK2-202ENST00000348295 MYO15BQ96JP2 1530 aa34.51■■■■□ 3.12
CHEK2-202ENST00000348295 RB1CC1Q8TDY2 1594 aa34.42■■■■□ 3.1
CHEK2-202ENST00000348295 SCRIBQ14160 1630 aa33.98■■■■□ 3.03
CHEK2-202ENST00000348295 UNC13AQ9UPW8 1703 aa33.98■■■■□ 3.03
CHEK2-202ENST00000348295 SHROOM4Q9ULL8 1493 aa33.86■■■■□ 3.01
CHEK2-202ENST00000348295 BICRAQ9NZM4 1560 aa33.53■■■□□ 2.96
CHEK2-202ENST00000348295 PABPN1Q86U42 306 aaKnown RBP eCLIP33.4■■■□□ 2.94
CHEK2-202ENST00000348295 CECR2Q9BXF3 1484 aa32.78■■■□□ 2.84
CHEK2-202ENST00000348295 MROH2BQ7Z745 1585 aa32.51■■■□□ 2.8
CHEK2-202ENST00000348295 SMARCA4P51532 1647 aa32.51■■■□□ 2.79
CHEK2-202ENST00000348295 EIF4G1Q04637 1599 aaKnown RBP32.51■■■□□ 2.79
CHEK2-202ENST00000348295 BAZ1AQ9NRL2 1556 aaPredicted RBP32.48■■■□□ 2.79
CHEK2-202ENST00000348295 RSF1Q96T23 1441 aaPredicted RBP32.34■■■□□ 2.77
CHEK2-202ENST00000348295 WIZO95785 1651 aa32.27■■■□□ 2.76
CHEK2-202ENST00000348295 CC2D2AQ9P2K1 1620 aa32.23■■■□□ 2.75
CHEK2-202ENST00000348295 SUPT5HO00267 1087 aaKnown RBP32.17■■■□□ 2.74
CHEK2-202ENST00000348295 PEG3Q9GZU2 1588 aa32.1■■■□□ 2.73
CHEK2-202ENST00000348295 ATAD2BQ9ULI0 1458 aa32.08■■■□□ 2.73
CHEK2-202ENST00000348295 DNAJC5BQ9UF47 199 aa32.05■■■□□ 2.72
CHEK2-202ENST00000348295 SMARCA2P51531 1590 aa32.01■■■□□ 2.71
CHEK2-202ENST00000348295 NCAPD3P42695 1498 aa31.87■■■□□ 2.69
CHEK2-202ENST00000348295 BAZ1BQ9UIG0 1483 aaKnown RBP31.83■■■□□ 2.69
CHEK2-202ENST00000348295 TOP2AP11388 1531 aaKnown RBP31.81■■■□□ 2.68
CHEK2-202ENST00000348295 HMGXB3Q12766 1538 aa31.81■■■□□ 2.68
CHEK2-202ENST00000348295 CCDC88BA6NC98 1476 aa31.48■■■□□ 2.63
CHEK2-202ENST00000348295 NESP48681 1621 aa31.09■■■□□ 2.57
CHEK2-202ENST00000348295 CFTRP13569 1480 aa31■■■□□ 2.55
CHEK2-202ENST00000348295 CADPSQ9ULU8 1353 aa30.99■■■□□ 2.55
CHEK2-202ENST00000348295 PRDM2Q13029 1718 aa30.98■■■□□ 2.55
CHEK2-202ENST00000348295 LAMC3Q9Y6N6 1575 aa30.94■■■□□ 2.54
CHEK2-202ENST00000348295 KIF21AQ7Z4S6 1674 aa30.78■■■□□ 2.52
CHEK2-202ENST00000348295 FANCD2Q9BXW9 1451 aa30.69■■■□□ 2.5
CHEK2-202ENST00000348295 ABCC8Q09428 1581 aa30.68■■■□□ 2.5
CHEK2-202ENST00000348295 PDS5BQ9NTI5 1447 aa30.62■■■□□ 2.49
CHEK2-202ENST00000348295 CEP164Q9UPV0 1460 aa30.55■■■□□ 2.48
CHEK2-202ENST00000348295 ERCC6Q03468 1493 aa30.49■■■□□ 2.47
CHEK2-202ENST00000348295 SYNJ1O43426 1573 aa30.46■■■□□ 2.47
CHEK2-202ENST00000348295 CHIC1Q5VXU3 224 aa30.45■■■□□ 2.46
CHEK2-202ENST00000348295 CUX1P39880 1505 aa30.44■■■□□ 2.46
CHEK2-202ENST00000348295 WRNQ14191 1432 aaPredicted RBP eCLIP30.42■■■□□ 2.46
CHEK2-202ENST00000348295 URB2Q14146 1524 aaKnown RBP30.42■■■□□ 2.46
CHEK2-202ENST00000348295 THOC2Q8NI27 1593 aaKnown RBP30.39■■■□□ 2.46
CHEK2-202ENST00000348295 BIVM-ERCC5R4GMW8 1640 aa30.35■■■□□ 2.45
CHEK2-202ENST00000348295 MRC2Q9UBG0 1479 aa30.34■■■□□ 2.45
CHEK2-202ENST00000348295 TOP2BQ02880 1626 aa30.33■■■□□ 2.45
CHEK2-202ENST00000348295 DNMBPQ6XZF7 1577 aa30.32■■■□□ 2.45
CHEK2-202ENST00000348295 TOPBP1Q92547 1522 aa30.32■■■□□ 2.44
CHEK2-202ENST00000348295 WDR62O43379 1518 aa30.25■■■□□ 2.43
CHEK2-202ENST00000348295 TRIM41Q8WV44 630 aa30.23■■■□□ 2.43
CHEK2-202ENST00000348295 FGD5Q6ZNL6 1462 aa30.17■■■□□ 2.42
CHEK2-202ENST00000348295 POLA1P09884 1462 aaPredicted RBP30.12■■■□□ 2.41
CHEK2-202ENST00000348295 RAD54L2Q9Y4B4 1467 aa30.05■■■□□ 2.4
CHEK2-202ENST00000348295 CUX2O14529 1486 aa30.04■■■□□ 2.4
CHEK2-202ENST00000348295 TARBP1Q13395 1621 aaKnown RBP29.98■■■□□ 2.39
CHEK2-202ENST00000348295 WDR97A6NE52 1622 aa29.97■■■□□ 2.39
CHEK2-202ENST00000348295 SOGA1O94964 1423 aa29.96■■■□□ 2.39
CHEK2-202ENST00000348295 RUSC2Q8N2Y8 1516 aa29.9■■■□□ 2.38
CHEK2-202ENST00000348295 ABCA10Q8WWZ4 1543 aa29.85■■■□□ 2.37
CHEK2-202ENST00000348295 IFT140Q96RY7 1462 aa29.83■■■□□ 2.37
CHEK2-202ENST00000348295 ZNF608Q9ULD9 1512 aaPredicted RBP29.82■■■□□ 2.36
CHEK2-202ENST00000348295 TDRD9Q8NDG6 1382 aaKnown RBP29.77■■■□□ 2.36
CHEK2-202ENST00000348295 ABCA5Q8WWZ7 1642 aa29.75■■■□□ 2.35
CHEK2-202ENST00000348295 FAM9AQ8IZU1 332 aaPredicted RBP29.75■■■□□ 2.35
CHEK2-202ENST00000348295 EIF4G3O43432 1585 aaKnown RBP29.71■■■□□ 2.35
CHEK2-202ENST00000348295 AQRO60306 1485 aaKnown RBP eCLIP29.71■■■□□ 2.351e-11■■■■■ 27.3
CHEK2-202ENST00000348295 PBRM1Q86U86 1689 aa29.67■■■□□ 2.34
CHEK2-202ENST00000348295 KIF27Q86VH2 1401 aa29.67■■■□□ 2.34
CHEK2-202ENST00000348295 GAPVD1Q14C86 1478 aa29.63■■■□□ 2.33
CHEK2-202ENST00000348295 EEA1Q15075 1411 aa29.53■■■□□ 2.32
CHEK2-202ENST00000348295 IGF1RP08069 1367 aa29.53■■■□□ 2.32
CHEK2-202ENST00000348295 CSRNP3Q8WYN3 585 aa29.49■■■□□ 2.31
CHEK2-202ENST00000348295 ERICH3Q5RHP9 1530 aa29.48■■■□□ 2.31
CHEK2-202ENST00000348295 GRIN2BQ13224 1484 aa29.47■■■□□ 2.31
CHEK2-202ENST00000348295 SNAPC4Q5SXM2 1469 aa29.42■■■□□ 2.3
CHEK2-202ENST00000348295 EHMT2Q96KQ7 1210 aa29.4■■■□□ 2.3
CHEK2-202ENST00000348295 CUL7Q14999 1698 aa29.4■■■□□ 2.3
CHEK2-202ENST00000348295 ADAMTS12P58397 1594 aa29.39■■■□□ 2.3
CHEK2-202ENST00000348295 PRXQ9BXM0 1461 aa29.36■■■□□ 2.29
CHEK2-202ENST00000348295 KIF21BO75037 1637 aa29.34■■■□□ 2.29
CHEK2-202ENST00000348295 CARMIL1Q5VZK9 1371 aa29.34■■■□□ 2.29
CHEK2-202ENST00000348295 LOC105371045A0A1W2PR82 267 aa29.31■■■□□ 2.28
CHEK2-202ENST00000348295 RAPGEF2Q9Y4G8 1499 aa29.31■■■□□ 2.28
CHEK2-202ENST00000348295 MAGI1Q96QZ7 1491 aaPredicted RBP29.3■■■□□ 2.28
CHEK2-202ENST00000348295 CHD1O14646 1710 aa29.29■■■□□ 2.28
CHEK2-202ENST00000348295 FHAD1B1AJZ9 1412 aa29.26■■■□□ 2.27
CHEK2-202ENST00000348295 SYNJ2O15056 1496 aa29.21■■■□□ 2.27
CHEK2-202ENST00000348295 GOLGA3Q08378 1498 aa29.17■■■□□ 2.26
CHEK2-202ENST00000348295 GRIN2AQ12879 1464 aa29.15■■■□□ 2.26
CHEK2-202ENST00000348295 FBLN2P98095 1184 aa29.15■■■□□ 2.26
CHEK2-202ENST00000348295 CHMP7Q8WUX9 453 aaPredicted RBP29.11■■■□□ 2.25
CHEK2-202ENST00000348295 CTTNBP2Q8WZ74 1663 aa29.08■■■□□ 2.25
CHEK2-202ENST00000348295 CEP170Q5SW79 1584 aa29.07■■■□□ 2.24
CHEK2-202ENST00000348295 UBTFP17480 764 aaKnown RBP29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms