RNA–Protein interactions for RNA: ENST00000258229.13

PCNX2-201, Transcript of pecanex 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PCNX2, Length 7,518 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-201ENST00000258229 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
PCNX2-201ENST00000258229 EHMT2Q96KQ7 1210 aa26.37■■□□□ 1.81
PCNX2-201ENST00000258229 PELP1Q8IZL8 1130 aaKnown RBP25.76■■□□□ 1.71
PCNX2-201ENST00000258229 SUPT5HO00267 1087 aaKnown RBP25.62■■□□□ 1.69
PCNX2-201ENST00000258229 TTBK1Q5TCY1 1321 aaPredicted RBP25.38■■□□□ 1.65
PCNX2-201ENST00000258229 ERICH6Q7L0X2 663 aa25.35■■□□□ 1.65
PCNX2-201ENST00000258229 APLP2Q06481 763 aa25.06■■□□□ 1.6
PCNX2-201ENST00000258229 MYT1Q01538 1121 aa25.03■■□□□ 1.6
PCNX2-201ENST00000258229 RANGAP1P46060 587 aaPredicted RBP24.97■■□□□ 1.59
PCNX2-201ENST00000258229 SHROOM4Q9ULL8 1493 aa24.87■■□□□ 1.57
PCNX2-201ENST00000258229 ATP1B4Q9UN42 357 aaPredicted RBP24.82■■□□□ 1.56
PCNX2-201ENST00000258229 FAM9AQ8IZU1 332 aaPredicted RBP24.8■■□□□ 1.56
PCNX2-201ENST00000258229 CCER1Q8TC90 406 aaPredicted RBP24.68■■□□□ 1.54
PCNX2-201ENST00000258229 PCGF6Q9BYE7 350 aa24.55■■□□□ 1.52
PCNX2-201ENST00000258229 CHIC1Q5VXU3 224 aa24.34■■□□□ 1.49
PCNX2-201ENST00000258229 YTHDC1Q96MU7 727 aaKnown RBP24.32■■□□□ 1.48
PCNX2-201ENST00000258229 MYT1LQ9UL68 1186 aa24.22■■□□□ 1.47
PCNX2-201ENST00000258229 CNGB1Q14028 1251 aaPredicted RBP24.2■■□□□ 1.46
PCNX2-201ENST00000258229 NEFLP07196 543 aa24.15■■□□□ 1.46
PCNX2-201ENST00000258229 POLR3GLQ9BT43 218 aa24.14■■□□□ 1.46
PCNX2-201ENST00000258229 DAXXQ9UER7 740 aaPredicted RBP24.1■■□□□ 1.45
PCNX2-201ENST00000258229 CENPBP07199 599 aaPredicted RBP24.09■■□□□ 1.45
PCNX2-201ENST00000258229 SLC4A1APQ9BWU0 796 aaKnown RBP23.96■■□□□ 1.43
PCNX2-201ENST00000258229 PPARGC1BQ86YN6 1023 aaKnown RBP23.73■■□□□ 1.39
PCNX2-201ENST00000258229 UBTFP17480 764 aaKnown RBP23.64■■□□□ 1.38
PCNX2-201ENST00000258229 BCL11AQ9H165 835 aa23.62■■□□□ 1.37
PCNX2-201ENST00000258229 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.62■■□□□ 1.37
PCNX2-201ENST00000258229 HNRNPUL2Q1KMD3 747 aaKnown RBP23.62■■□□□ 1.37
PCNX2-201ENST00000258229 ITGAEP38570 1179 aa23.56■■□□□ 1.36
PCNX2-201ENST00000258229 CLSPNQ9HAW4 1339 aa23.53■■□□□ 1.36
PCNX2-201ENST00000258229 SLC24A1O60721 1099 aa23.47■■□□□ 1.35
PCNX2-201ENST00000258229 ZNF316A6NFI3 1004 aaPredicted RBP23.45■■□□□ 1.35
PCNX2-201ENST00000258229 TRIM41Q8WV44 630 aa23.28■■□□□ 1.32
PCNX2-201ENST00000258229 ZEB1P37275 1124 aaPredicted RBP23.16■■□□□ 1.3
PCNX2-201ENST00000258229 RTL5Q5HYW3 569 aaPredicted RBP23.13■■□□□ 1.29
PCNX2-201ENST00000258229 ZBTB47Q9UFB7 747 aaPredicted RBP22.93■■□□□ 1.26
PCNX2-201ENST00000258229 BCANQ96GW7 911 aa22.9■■□□□ 1.26
PCNX2-201ENST00000258229 PLPPR3Q6T4P5 718 aa22.83■■□□□ 1.24
PCNX2-201ENST00000258229 ZNF326Q5BKZ1 582 aaKnown RBP22.66■■□□□ 1.22
PCNX2-201ENST00000258229 CANXP27824 592 aaKnown RBP22.62■■□□□ 1.21
PCNX2-201ENST00000258229 TRIM52Q96A61 297 aa22.56■■□□□ 1.2
PCNX2-201ENST00000258229 NEUROD1Q13562 356 aa22.51■■□□□ 1.19
PCNX2-201ENST00000258229 FAM50AQ14320 339 aaKnown RBP22.49■■□□□ 1.19
PCNX2-201ENST00000258229 A0A0G2JS52 829 aa22.48■■□□□ 1.19
PCNX2-201ENST00000258229 EIF5BO60841 1220 aaKnown RBP22.46■■□□□ 1.19
PCNX2-201ENST00000258229 NPM2Q86SE8 214 aaKnown RBP22.4■■□□□ 1.18
PCNX2-201ENST00000258229 TULP1O00294 542 aaPredicted RBP22.38■■□□□ 1.17
PCNX2-201ENST00000258229 HRCP23327 699 aa22.34■■□□□ 1.17
PCNX2-201ENST00000258229 NEFMP07197 916 aa22.34■■□□□ 1.17
PCNX2-201ENST00000258229 PLEKHG5O94827 1062 aa22.33■■□□□ 1.17
PCNX2-201ENST00000258229 ARXQ96QS3 562 aa22.32■■□□□ 1.16
PCNX2-201ENST00000258229 SCAF1Q9H7N4 1312 aaKnown RBP22.32■■□□□ 1.16
PCNX2-201ENST00000258229 FBLN2P98095 1184 aa22.27■■□□□ 1.16
PCNX2-201ENST00000258229 HSP90AA1P07900 732 aaKnown RBP22.26■■□□□ 1.15
PCNX2-201ENST00000258229 NCBP3Q53F19 620 aaKnown RBP22.25■■□□□ 1.15
PCNX2-201ENST00000258229 CDK11AQ9UQ88 783 aaPredicted RBP22.23■■□□□ 1.15
PCNX2-201ENST00000258229 TRIM26Q12899 539 aaPredicted RBP22.23■■□□□ 1.15
PCNX2-201ENST00000258229 CDK11BP21127 795 aaKnown RBP22.16■■□□□ 1.14
PCNX2-201ENST00000258229 ARID3CA6NKF2 412 aa22.16■■□□□ 1.14
PCNX2-201ENST00000258229 ANP32BQ92688 251 aaKnown RBP22.14■■□□□ 1.14
PCNX2-201ENST00000258229 NISCHQ9Y2I1 1504 aa22.14■■□□□ 1.13
PCNX2-201ENST00000258229 LOC105371045A0A1W2PR82 267 aa22.13■■□□□ 1.13
PCNX2-201ENST00000258229 DIEXFQ68CQ4 756 aaKnown RBP22.13■■□□□ 1.13
PCNX2-201ENST00000258229 SENP3Q9H4L4 574 aaPredicted RBP22.07■■□□□ 1.12
PCNX2-201ENST00000258229 ANP32CO43423 234 aa22.01■■□□□ 1.11
PCNX2-201ENST00000258229 ESF1Q9H501 851 aaKnown RBP22.01■■□□□ 1.11
PCNX2-201ENST00000258229 CHGAP10645 457 aaKnown RBP22■■□□□ 1.11
PCNX2-201ENST00000258229 ZBTB7CA1YPR0 619 aa22■■□□□ 1.11
PCNX2-201ENST00000258229 SALL2Q9Y467 1007 aaPredicted RBP22■■□□□ 1.11
PCNX2-201ENST00000258229 STAG3Q9UJ98 1225 aa21.99■■□□□ 1.11
PCNX2-201ENST00000258229 ANP32AP39687 249 aaKnown RBP21.95■■□□□ 1.1
PCNX2-201ENST00000258229 TPRNQ4KMQ1 711 aa21.91■■□□□ 1.1
PCNX2-201ENST00000258229 TAOK2Q9UL54 1235 aa21.89■■□□□ 1.09
PCNX2-201ENST00000258229 GTF3C3Q9Y5Q9 886 aa21.85■■□□□ 1.09
PCNX2-201ENST00000258229 ZNF777Q9ULD5 760 aaPredicted RBP21.83■■□□□ 1.08
PCNX2-201ENST00000258229 NBR1Q14596 966 aa21.8■■□□□ 1.08
PCNX2-201ENST00000258229 C14orf37Q86TY3 774 aa21.73■■□□□ 1.07
PCNX2-201ENST00000258229 UPF2Q9HAU5 1272 aaKnown RBP21.72■■□□□ 1.07
PCNX2-201ENST00000258229 P3H3Q8IVL6 736 aa21.7■■□□□ 1.07
PCNX2-201ENST00000258229 GLIPR1L2Q4G1C9 344 aa21.64■■□□□ 1.05
PCNX2-201ENST00000258229 AMER1Q5JTC6 1135 aaPredicted RBP21.55■■□□□ 1.04
PCNX2-201ENST00000258229 HAP1P54257 671 aaPredicted RBP21.54■■□□□ 1.04
PCNX2-201ENST00000258229 CLSTN1O94985 981 aa21.54■■□□□ 1.04
PCNX2-201ENST00000258229 NPHP1O15259 732 aa21.54■■□□□ 1.04
PCNX2-201ENST00000258229 FAM9BQ8IZU0 186 aa21.54■■□□□ 1.04
PCNX2-201ENST00000258229 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.48■■□□□ 1.03
PCNX2-201ENST00000258229 FKBP8Q14318 412 aa21.46■■□□□ 1.03
PCNX2-201ENST00000258229 NCLP19338 710 aaKnown RBP21.43■■□□□ 1.02
PCNX2-201ENST00000258229 PRM3Q9NNZ6 103 aa21.41■■□□□ 1.02
PCNX2-201ENST00000258229 PABPN1Q86U42 306 aaKnown RBP eCLIP21.39■■□□□ 1.01
PCNX2-201ENST00000258229 SENP3-EIF4A1A0A087X0R7 540 aa21.38■■□□□ 1.01
PCNX2-201ENST00000258229 MYH16Q9H6N6 1097 aa21.35■■□□□ 1.01
PCNX2-201ENST00000258229 DNTTIP2Q5QJE6 756 aaKnown RBP21.35■■□□□ 1.01
PCNX2-201ENST00000258229 ZRSR1Q15695 479 aaKnown RBP21.35■■□□□ 1.01
PCNX2-201ENST00000258229 HNRNPUQ00839 825 aaKnown RBP eCLIP21.34■■□□□ 1.01
PCNX2-201ENST00000258229 IRX6P78412 446 aaPredicted RBP21.33■■□□□ 1
PCNX2-201ENST00000258229 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.32■■□□□ 1
PCNX2-201ENST00000258229 KDM2AQ9Y2K7 1162 aa21.3■■□□□ 1
PCNX2-201ENST00000258229 PLCB2Q00722 1185 aa21.3■■□□□ 1
PCNX2-201ENST00000258229 PTMAP06454 111 aaKnown RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms