RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 NISCHQ9Y2I1 1504 aa43.58■■■■■ 4.57
TRIM13-206ENST00000457662 CCDC180Q9P1Z9 1646 aa38.58■■■■□ 3.77
TRIM13-206ENST00000457662 ABCC9O60706 1549 aa37.54■■■■□ 3.6
TRIM13-206ENST00000457662 DCAF8L2P0C7V8 631 aa36.4■■■■□ 3.42
TRIM13-206ENST00000457662 ZCCHC6Q5VYS8 1495 aaKnown RBP36.32■■■■□ 3.4
TRIM13-206ENST00000457662 NACADO15069 1562 aa36.26■■■■□ 3.4
TRIM13-206ENST00000457662 RB1CC1Q8TDY2 1594 aa36.23■■■■□ 3.39
TRIM13-206ENST00000457662 MYO15BQ96JP2 1530 aa36.14■■■■□ 3.38
TRIM13-206ENST00000457662 DCAF1Q9Y4B6 1507 aa36.08■■■■□ 3.37
TRIM13-206ENST00000457662 UNC13AQ9UPW8 1703 aa35.33■■■■□ 3.25
TRIM13-206ENST00000457662 SCRIBQ14160 1630 aa35.21■■■■□ 3.23
TRIM13-206ENST00000457662 PABPN1Q86U42 306 aaKnown RBP eCLIP35.17■■■■□ 3.22
TRIM13-206ENST00000457662 BICRAQ9NZM4 1560 aa35.09■■■■□ 3.21
TRIM13-206ENST00000457662 SHROOM4Q9ULL8 1493 aa34.78■■■■□ 3.16
TRIM13-206ENST00000457662 DNAJC5BQ9UF47 199 aa34.26■■■■□ 3.07
TRIM13-206ENST00000457662 EIF4G1Q04637 1599 aaKnown RBP34.16■■■■□ 3.06
TRIM13-206ENST00000457662 CC2D2AQ9P2K1 1620 aa33.95■■■■□ 3.02
TRIM13-206ENST00000457662 CECR2Q9BXF3 1484 aa33.91■■■■□ 3.02
TRIM13-206ENST00000457662 BAZ1AQ9NRL2 1556 aaPredicted RBP33.76■■■□□ 2.99
TRIM13-206ENST00000457662 SMARCA4P51532 1647 aa33.72■■■□□ 2.99
TRIM13-206ENST00000457662 MROH2BQ7Z745 1585 aa33.57■■■□□ 2.96
TRIM13-206ENST00000457662 ATAD2BQ9ULI0 1458 aa33.51■■■□□ 2.96
TRIM13-206ENST00000457662 SMARCA2P51531 1590 aa33.49■■■□□ 2.95
TRIM13-206ENST00000457662 NCAPD3P42695 1498 aa33.48■■■□□ 2.95
TRIM13-206ENST00000457662 PEG3Q9GZU2 1588 aa33.41■■■□□ 2.94
TRIM13-206ENST00000457662 RSF1Q96T23 1441 aaPredicted RBP33.32■■■□□ 2.92
TRIM13-206ENST00000457662 HMGXB3Q12766 1538 aa33.29■■■□□ 2.92
TRIM13-206ENST00000457662 BAZ1BQ9UIG0 1483 aaKnown RBP33.25■■■□□ 2.91
TRIM13-206ENST00000457662 WIZO95785 1651 aa33.2■■■□□ 2.91
TRIM13-206ENST00000457662 TOP2AP11388 1531 aaKnown RBP32.88■■■□□ 2.85
TRIM13-206ENST00000457662 SUPT5HO00267 1087 aaKnown RBP32.72■■■□□ 2.83
TRIM13-206ENST00000457662 NESP48681 1621 aa32.54■■■□□ 2.8
TRIM13-206ENST00000457662 CADPSQ9ULU8 1353 aa32.53■■■□□ 2.8
TRIM13-206ENST00000457662 CCDC88BA6NC98 1476 aa32.53■■■□□ 2.8
TRIM13-206ENST00000457662 LAMC3Q9Y6N6 1575 aa32.52■■■□□ 2.8
TRIM13-206ENST00000457662 CFTRP13569 1480 aa32.37■■■□□ 2.77
TRIM13-206ENST00000457662 ERCC6Q03468 1493 aa32.35■■■□□ 2.77
TRIM13-206ENST00000457662 PDS5BQ9NTI5 1447 aa32.35■■■□□ 2.77
TRIM13-206ENST00000457662 KIF21AQ7Z4S6 1674 aa32.12■■■□□ 2.73
TRIM13-206ENST00000457662 FANCD2Q9BXW9 1451 aa32.12■■■□□ 2.73
TRIM13-206ENST00000457662 CEP164Q9UPV0 1460 aa32.05■■■□□ 2.72
TRIM13-206ENST00000457662 PRDM2Q13029 1718 aa32.05■■■□□ 2.72
TRIM13-206ENST00000457662 THOC2Q8NI27 1593 aaKnown RBP31.95■■■□□ 2.71
TRIM13-206ENST00000457662 MRC2Q9UBG0 1479 aa31.95■■■□□ 2.71
TRIM13-206ENST00000457662 CUX2O14529 1486 aa31.91■■■□□ 2.7
TRIM13-206ENST00000457662 WDR62O43379 1518 aa31.81■■■□□ 2.68
TRIM13-206ENST00000457662 URB2Q14146 1524 aaKnown RBP31.76■■■□□ 2.67
TRIM13-206ENST00000457662 ABCC8Q09428 1581 aa31.7■■■□□ 2.67
TRIM13-206ENST00000457662 TOPBP1Q92547 1522 aa31.63■■■□□ 2.65
TRIM13-206ENST00000457662 DNMBPQ6XZF7 1577 aa31.6■■■□□ 2.65
TRIM13-206ENST00000457662 CUX1P39880 1505 aa31.47■■■□□ 2.63
TRIM13-206ENST00000457662 WRNQ14191 1432 aaPredicted RBP eCLIP31.41■■■□□ 2.62
TRIM13-206ENST00000457662 IFT140Q96RY7 1462 aa31.39■■■□□ 2.62
TRIM13-206ENST00000457662 POLA1P09884 1462 aaPredicted RBP31.37■■■□□ 2.61
TRIM13-206ENST00000457662 FGD5Q6ZNL6 1462 aa31.34■■■□□ 2.61
TRIM13-206ENST00000457662 SOGA1O94964 1423 aa31.31■■■□□ 2.6
TRIM13-206ENST00000457662 TOP2BQ02880 1626 aa31.27■■■□□ 2.6
TRIM13-206ENST00000457662 SYNJ1O43426 1573 aa31.25■■■□□ 2.59
TRIM13-206ENST00000457662 BIVM-ERCC5R4GMW8 1640 aa31.25■■■□□ 2.59
TRIM13-206ENST00000457662 RAD54L2Q9Y4B4 1467 aa31.24■■■□□ 2.59
TRIM13-206ENST00000457662 TARBP1Q13395 1621 aaKnown RBP31.24■■■□□ 2.59
TRIM13-206ENST00000457662 ZNF608Q9ULD9 1512 aaPredicted RBP31.18■■■□□ 2.58
TRIM13-206ENST00000457662 TDRD9Q8NDG6 1382 aaKnown RBP31.08■■■□□ 2.57
TRIM13-206ENST00000457662 AQRO60306 1485 aaKnown RBP eCLIP31.08■■■□□ 2.576e-15■■■■■ 98.7
TRIM13-206ENST00000457662 ABCA10Q8WWZ4 1543 aa31.06■■■□□ 2.56
TRIM13-206ENST00000457662 EIF4G3O43432 1585 aaKnown RBP31.04■■■□□ 2.56
TRIM13-206ENST00000457662 WDR97A6NE52 1622 aa31.03■■■□□ 2.56
TRIM13-206ENST00000457662 GAPVD1Q14C86 1478 aa30.93■■■□□ 2.54
TRIM13-206ENST00000457662 TRIM41Q8WV44 630 aa30.92■■■□□ 2.54
TRIM13-206ENST00000457662 GRIN2BQ13224 1484 aa30.89■■■□□ 2.54
TRIM13-206ENST00000457662 ABCA5Q8WWZ7 1642 aa30.86■■■□□ 2.53
TRIM13-206ENST00000457662 SNAPC4Q5SXM2 1469 aa30.77■■■□□ 2.52
TRIM13-206ENST00000457662 MAGI1Q96QZ7 1491 aaPredicted RBP30.77■■■□□ 2.52
TRIM13-206ENST00000457662 KIF27Q86VH2 1401 aa30.76■■■□□ 2.51
TRIM13-206ENST00000457662 PBRM1Q86U86 1689 aa30.75■■■□□ 2.51
TRIM13-206ENST00000457662 OSCARQ8IYS5 282 aa30.74■■■□□ 2.51
TRIM13-206ENST00000457662 FBLN2P98095 1184 aa30.71■■■□□ 2.51
TRIM13-206ENST00000457662 CHIC1Q5VXU3 224 aa30.7■■■□□ 2.5
TRIM13-206ENST00000457662 DNAJC5Q9H3Z4 198 aa30.7■■■□□ 2.5
TRIM13-206ENST00000457662 ERICH3Q5RHP9 1530 aa30.69■■■□□ 2.5
TRIM13-206ENST00000457662 CHMP7Q8WUX9 453 aaPredicted RBP30.69■■■□□ 2.5
TRIM13-206ENST00000457662 SYNJ2O15056 1496 aa30.64■■■□□ 2.5
TRIM13-206ENST00000457662 IGF1RP08069 1367 aa30.61■■■□□ 2.49
TRIM13-206ENST00000457662 CHD1O14646 1710 aa30.59■■■□□ 2.49
TRIM13-206ENST00000457662 FHAD1B1AJZ9 1412 aa30.59■■■□□ 2.49
TRIM13-206ENST00000457662 ADAMTS12P58397 1594 aa30.54■■■□□ 2.48
TRIM13-206ENST00000457662 RUSC2Q8N2Y8 1516 aa30.51■■■□□ 2.47
TRIM13-206ENST00000457662 GRIN2AQ12879 1464 aa30.46■■■□□ 2.47
TRIM13-206ENST00000457662 CUL7Q14999 1698 aa30.44■■■□□ 2.46
TRIM13-206ENST00000457662 CARMIL1Q5VZK9 1371 aa30.43■■■□□ 2.46
TRIM13-206ENST00000457662 EEA1Q15075 1411 aa30.35■■■□□ 2.45
TRIM13-206ENST00000457662 NUP160Q12769 1436 aa30.33■■■□□ 2.45
TRIM13-206ENST00000457662 CSRNP3Q8WYN3 585 aa30.31■■■□□ 2.44
TRIM13-206ENST00000457662 CLASP1Q7Z460 1538 aa30.29■■■□□ 2.44
TRIM13-206ENST00000457662 CEP170Q5SW79 1584 aa30.26■■■□□ 2.44
TRIM13-206ENST00000457662 RAPGEF2Q9Y4G8 1499 aa30.25■■■□□ 2.43
TRIM13-206ENST00000457662 FAM9AQ8IZU1 332 aaPredicted RBP30.24■■■□□ 2.43
TRIM13-206ENST00000457662 PRXQ9BXM0 1461 aa30.2■■■□□ 2.43
TRIM13-206ENST00000457662 KIAA0586Q9BVV6 1533 aa30.13■■■□□ 2.41
TRIM13-206ENST00000457662 ARHGEF11O15085 1522 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms