RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 DCAF8L2P0C7V8 631 aa27.84■■■□□ 2.05
CACNA1A-221ENST00000636012 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
CACNA1A-221ENST00000636012 EHMT2Q96KQ7 1210 aa25.89■■□□□ 1.74
CACNA1A-221ENST00000636012 PELP1Q8IZL8 1130 aaKnown RBP25.51■■□□□ 1.67
CACNA1A-221ENST00000636012 SHROOM4Q9ULL8 1493 aa25.44■■□□□ 1.66
CACNA1A-221ENST00000636012 ERICH6Q7L0X2 663 aa25.17■■□□□ 1.62
CACNA1A-221ENST00000636012 APLP2Q06481 763 aa25.14■■□□□ 1.62
CACNA1A-221ENST00000636012 MYT1Q01538 1121 aa25.09■■□□□ 1.61
CACNA1A-221ENST00000636012 FAM9AQ8IZU1 332 aaPredicted RBP24.97■■□□□ 1.59
CACNA1A-221ENST00000636012 TTBK1Q5TCY1 1321 aaPredicted RBP24.96■■□□□ 1.59
CACNA1A-221ENST00000636012 RANGAP1P46060 587 aaPredicted RBP24.7■■□□□ 1.54
CACNA1A-221ENST00000636012 ATP1B4Q9UN42 357 aaPredicted RBP24.62■■□□□ 1.53
CACNA1A-221ENST00000636012 NISCHQ9Y2I1 1504 aa24.59■■□□□ 1.53
CACNA1A-221ENST00000636012 PCGF6Q9BYE7 350 aa24.43■■□□□ 1.5
CACNA1A-221ENST00000636012 CCER1Q8TC90 406 aaPredicted RBP24.39■■□□□ 1.49
CACNA1A-221ENST00000636012 CENPBP07199 599 aaPredicted RBP24.03■■□□□ 1.44
CACNA1A-221ENST00000636012 UBTFP17480 764 aaKnown RBP23.95■■□□□ 1.43
CACNA1A-221ENST00000636012 MYT1LQ9UL68 1186 aa23.89■■□□□ 1.42
CACNA1A-221ENST00000636012 TRIM41Q8WV44 630 aa23.89■■□□□ 1.42
CACNA1A-221ENST00000636012 NEFLP07196 543 aa23.87■■□□□ 1.41
CACNA1A-221ENST00000636012 YTHDC1Q96MU7 727 aaKnown RBP23.86■■□□□ 1.41
CACNA1A-221ENST00000636012 DAXXQ9UER7 740 aaPredicted RBP23.79■■□□□ 1.4
CACNA1A-221ENST00000636012 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
CACNA1A-221ENST00000636012 ZEB1P37275 1124 aaPredicted RBP23.69■■□□□ 1.38
CACNA1A-221ENST00000636012 POLR3GLQ9BT43 218 aa23.67■■□□□ 1.38
CACNA1A-221ENST00000636012 PPARGC1BQ86YN6 1023 aaKnown RBP23.66■■□□□ 1.38
CACNA1A-221ENST00000636012 CNGB1Q14028 1251 aaPredicted RBP23.62■■□□□ 1.37
CACNA1A-221ENST00000636012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.58■■□□□ 1.37
CACNA1A-221ENST00000636012 HNRNPUL2Q1KMD3 747 aaKnown RBP23.58■■□□□ 1.37
CACNA1A-221ENST00000636012 ITGAEP38570 1179 aa23.47■■□□□ 1.35
CACNA1A-221ENST00000636012 SLC4A1APQ9BWU0 796 aaKnown RBP23.47■■□□□ 1.35
CACNA1A-221ENST00000636012 BCL11AQ9H165 835 aa23.18■■□□□ 1.3
CACNA1A-221ENST00000636012 ZNF316A6NFI3 1004 aaPredicted RBP23.14■■□□□ 1.29
CACNA1A-221ENST00000636012 CLSPNQ9HAW4 1339 aa23.09■■□□□ 1.29
CACNA1A-221ENST00000636012 SLC24A1O60721 1099 aa22.93■■□□□ 1.26
CACNA1A-221ENST00000636012 TRIM26Q12899 539 aaPredicted RBP22.88■■□□□ 1.25
CACNA1A-221ENST00000636012 RTL5Q5HYW3 569 aaPredicted RBP22.85■■□□□ 1.25
CACNA1A-221ENST00000636012 FAM50AQ14320 339 aaKnown RBP22.72■■□□□ 1.23
CACNA1A-221ENST00000636012 LOC105371045A0A1W2PR82 267 aa22.67■■□□□ 1.22
CACNA1A-221ENST00000636012 TRIM52Q96A61 297 aa22.67■■□□□ 1.22
CACNA1A-221ENST00000636012 HRCP23327 699 aa22.65■■□□□ 1.22
CACNA1A-221ENST00000636012 BCANQ96GW7 911 aa22.61■■□□□ 1.21
CACNA1A-221ENST00000636012 ZBTB47Q9UFB7 747 aaPredicted RBP22.59■■□□□ 1.21
CACNA1A-221ENST00000636012 NEUROD1Q13562 356 aa22.56■■□□□ 1.2
CACNA1A-221ENST00000636012 ZNF326Q5BKZ1 582 aaKnown RBP22.52■■□□□ 1.2
CACNA1A-221ENST00000636012 FBLN2P98095 1184 aa22.48■■□□□ 1.19
CACNA1A-221ENST00000636012 EIF5BO60841 1220 aaKnown RBP22.38■■□□□ 1.17
CACNA1A-221ENST00000636012 DIEXFQ68CQ4 756 aaKnown RBP22.37■■□□□ 1.17
CACNA1A-221ENST00000636012 CANXP27824 592 aaKnown RBP22.36■■□□□ 1.17
CACNA1A-221ENST00000636012 PLPPR3Q6T4P5 718 aa22.3■■□□□ 1.16
CACNA1A-221ENST00000636012 PABPN1Q86U42 306 aaKnown RBP eCLIP22.27■■□□□ 1.16
CACNA1A-221ENST00000636012 NEFMP07197 916 aa22.27■■□□□ 1.16
CACNA1A-221ENST00000636012 ANP32CO43423 234 aa22.2■■□□□ 1.14
CACNA1A-221ENST00000636012 ARID3CA6NKF2 412 aa22.19■■□□□ 1.14
CACNA1A-221ENST00000636012 CDK11AQ9UQ88 783 aaPredicted RBP22.14■■□□□ 1.14
CACNA1A-221ENST00000636012 ESF1Q9H501 851 aaKnown RBP22.07■■□□□ 1.12
CACNA1A-221ENST00000636012 TULP1O00294 542 aaPredicted RBP22.06■■□□□ 1.12
CACNA1A-221ENST00000636012 ARXQ96QS3 562 aa22.06■■□□□ 1.12
CACNA1A-221ENST00000636012 ABCC9O60706 1549 aa22.03■■□□□ 1.12
CACNA1A-221ENST00000636012 P3H3Q8IVL6 736 aa22.03■■□□□ 1.12
CACNA1A-221ENST00000636012 ZNF777Q9ULD5 760 aaPredicted RBP22.01■■□□□ 1.11
CACNA1A-221ENST00000636012 NPM2Q86SE8 214 aaKnown RBP22.01■■□□□ 1.11
CACNA1A-221ENST00000636012 NCBP3Q53F19 620 aaKnown RBP22■■□□□ 1.11
CACNA1A-221ENST00000636012 STAG3Q9UJ98 1225 aa21.99■■□□□ 1.11
CACNA1A-221ENST00000636012 CHGAP10645 457 aaKnown RBP21.94■■□□□ 1.1
CACNA1A-221ENST00000636012 HSP90AA1P07900 732 aaKnown RBP21.87■■□□□ 1.09
CACNA1A-221ENST00000636012 GTF3C3Q9Y5Q9 886 aa21.86■■□□□ 1.09
CACNA1A-221ENST00000636012 SCAF1Q9H7N4 1312 aaKnown RBP21.86■■□□□ 1.09
CACNA1A-221ENST00000636012 CDK11BP21127 795 aaKnown RBP21.85■■□□□ 1.09
CACNA1A-221ENST00000636012 ANP32BQ92688 251 aaKnown RBP21.85■■□□□ 1.09
CACNA1A-221ENST00000636012 A0A0G2JS52 829 aa21.84■■□□□ 1.09
CACNA1A-221ENST00000636012 ANP32AP39687 249 aaKnown RBP21.81■■□□□ 1.08
CACNA1A-221ENST00000636012 PLEKHG5O94827 1062 aa21.72■■□□□ 1.07
CACNA1A-221ENST00000636012 SALL2Q9Y467 1007 aaPredicted RBP21.72■■□□□ 1.07
CACNA1A-221ENST00000636012 NPM1P06748 294 aaKnown RBP eCLIP21.64■■□□□ 1.05
CACNA1A-221ENST00000636012 SENP3Q9H4L4 574 aaPredicted RBP21.63■■□□□ 1.05
CACNA1A-221ENST00000636012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.62■■□□□ 1.05
CACNA1A-221ENST00000636012 GLIPR1L2Q4G1C9 344 aa21.62■■□□□ 1.05
CACNA1A-221ENST00000636012 UPF2Q9HAU5 1272 aaKnown RBP21.61■■□□□ 1.05
CACNA1A-221ENST00000636012 AMER1Q5JTC6 1135 aaPredicted RBP21.61■■□□□ 1.05
CACNA1A-221ENST00000636012 ZBTB7CA1YPR0 619 aa21.6■■□□□ 1.05
CACNA1A-221ENST00000636012 TPRNQ4KMQ1 711 aa21.56■■□□□ 1.04
CACNA1A-221ENST00000636012 FAM9BQ8IZU0 186 aa21.54■■□□□ 1.04
CACNA1A-221ENST00000636012 NBR1Q14596 966 aa21.53■■□□□ 1.04
CACNA1A-221ENST00000636012 C14orf37Q86TY3 774 aa21.49■■□□□ 1.03
CACNA1A-221ENST00000636012 TAOK2Q9UL54 1235 aa21.47■■□□□ 1.03
CACNA1A-221ENST00000636012 FKBP8Q14318 412 aa21.46■■□□□ 1.03
CACNA1A-221ENST00000636012 TONSLQ96HA7 1378 aa21.46■■□□□ 1.03
CACNA1A-221ENST00000636012 HNRNPUQ00839 825 aaKnown RBP eCLIP21.44■■□□□ 1.02
CACNA1A-221ENST00000636012 KDM2AQ9Y2K7 1162 aa21.43■■□□□ 1.02
CACNA1A-221ENST00000636012 TMC1Q8TDI8 760 aa21.4■■□□□ 1.02
CACNA1A-221ENST00000636012 WDR43Q15061 677 aaKnown RBP eCLIP21.4■■□□□ 1.02
CACNA1A-221ENST00000636012 CHIC2Q9UKJ5 165 aa21.39■■□□□ 1.01
CACNA1A-221ENST00000636012 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.36■■□□□ 1.01
CACNA1A-221ENST00000636012 DDX10Q13206 875 aaKnown RBP21.34■■□□□ 1.01
CACNA1A-221ENST00000636012 HAP1P54257 671 aaPredicted RBP21.31■■□□□ 1
CACNA1A-221ENST00000636012 MYH16Q9H6N6 1097 aa21.31■■□□□ 1
CACNA1A-221ENST00000636012 SCRIBQ14160 1630 aa21.28■■□□□ 1
CACNA1A-221ENST00000636012 CCDC136Q96JN2 1154 aa21.28■■□□□ 1
CACNA1A-221ENST00000636012 CSRNP3Q8WYN3 585 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms