RNA–Protein interactions for RNA: ENST00000344517.4

ABCB10-201, Transcript of ATP binding cassette subfamily B member 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB10, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB10-201ENST00000344517 NISCHQ9Y2I1 1504 aa31.94■■■□□ 2.7
ABCB10-201ENST00000344517 DCAF8L2P0C7V8 631 aa29.63■■■□□ 2.33
ABCB10-201ENST00000344517 SHROOM4Q9ULL8 1493 aa29.47■■■□□ 2.31
ABCB10-201ENST00000344517 SUPT5HO00267 1087 aaKnown RBP29.16■■■□□ 2.26
ABCB10-201ENST00000344517 EHMT2Q96KQ7 1210 aa27.81■■■□□ 2.04
ABCB10-201ENST00000344517 FAM9AQ8IZU1 332 aaPredicted RBP27.31■■□□□ 1.96
ABCB10-201ENST00000344517 PCGF6Q9BYE7 350 aa27.3■■□□□ 1.96
ABCB10-201ENST00000344517 CHIC1Q5VXU3 224 aa27.16■■□□□ 1.94
ABCB10-201ENST00000344517 LOC105371045A0A1W2PR82 267 aa27.09■■□□□ 1.93
ABCB10-201ENST00000344517 TTBK1Q5TCY1 1321 aaPredicted RBP26.77■■□□□ 1.88
ABCB10-201ENST00000344517 ZCCHC6Q5VYS8 1495 aaKnown RBP26.74■■□□□ 1.87
ABCB10-201ENST00000344517 PPARGC1BQ86YN6 1023 aaKnown RBP26.7■■□□□ 1.86
ABCB10-201ENST00000344517 TRIM41Q8WV44 630 aa26.68■■□□□ 1.86
ABCB10-201ENST00000344517 HRCP23327 699 aa26.6■■□□□ 1.85
ABCB10-201ENST00000344517 MYO15BQ96JP2 1530 aa26.5■■□□□ 1.83
ABCB10-201ENST00000344517 ABCC9O60706 1549 aa26.46■■□□□ 1.83
ABCB10-201ENST00000344517 RANGAP1P46060 587 aaPredicted RBP26.23■■□□□ 1.79
ABCB10-201ENST00000344517 CCDC180Q9P1Z9 1646 aa26.22■■□□□ 1.79
ABCB10-201ENST00000344517 SCRIBQ14160 1630 aa26.08■■□□□ 1.77
ABCB10-201ENST00000344517 TRIM26Q12899 539 aaPredicted RBP26■■□□□ 1.75
ABCB10-201ENST00000344517 PABPN1Q86U42 306 aaKnown RBP eCLIP25.99■■□□□ 1.75
ABCB10-201ENST00000344517 UBTFP17480 764 aaKnown RBP25.84■■□□□ 1.73
ABCB10-201ENST00000344517 CCER1Q8TC90 406 aaPredicted RBP25.75■■□□□ 1.71
ABCB10-201ENST00000344517 PELP1Q8IZL8 1130 aaKnown RBP25.69■■□□□ 1.7
ABCB10-201ENST00000344517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.68■■□□□ 1.7
ABCB10-201ENST00000344517 RSF1Q96T23 1441 aaPredicted RBP25.64■■□□□ 1.69
ABCB10-201ENST00000344517 ZEB1P37275 1124 aaPredicted RBP25.52■■□□□ 1.68
ABCB10-201ENST00000344517 CECR2Q9BXF3 1484 aa25.5■■□□□ 1.67
ABCB10-201ENST00000344517 APLP2Q06481 763 aa25.4■■□□□ 1.66
ABCB10-201ENST00000344517 HNRNPUL2Q1KMD3 747 aaKnown RBP25.36■■□□□ 1.65
ABCB10-201ENST00000344517 DCAF1Q9Y4B6 1507 aa25.3■■□□□ 1.64
ABCB10-201ENST00000344517 RB1CC1Q8TDY2 1594 aa25.3■■□□□ 1.64
ABCB10-201ENST00000344517 YTHDC1Q96MU7 727 aaKnown RBP25.3■■□□□ 1.64
ABCB10-201ENST00000344517 ATP1B4Q9UN42 357 aaPredicted RBP25.17■■□□□ 1.62
ABCB10-201ENST00000344517 MROH2BQ7Z745 1585 aa25.13■■□□□ 1.61
ABCB10-201ENST00000344517 ITGAEP38570 1179 aa25.12■■□□□ 1.61
ABCB10-201ENST00000344517 CENPBP07199 599 aaPredicted RBP25.02■■□□□ 1.6
ABCB10-201ENST00000344517 CSRNP3Q8WYN3 585 aa25■■□□□ 1.59
ABCB10-201ENST00000344517 SCAF1Q9H7N4 1312 aaKnown RBP24.97■■□□□ 1.59
ABCB10-201ENST00000344517 WIZO95785 1651 aa24.92■■□□□ 1.58
ABCB10-201ENST00000344517 DIEXFQ68CQ4 756 aaKnown RBP24.91■■□□□ 1.58
ABCB10-201ENST00000344517 MYT1Q01538 1121 aa24.88■■□□□ 1.57
ABCB10-201ENST00000344517 NACADO15069 1562 aa24.84■■□□□ 1.57
ABCB10-201ENST00000344517 GTF3C3Q9Y5Q9 886 aa24.84■■□□□ 1.57
ABCB10-201ENST00000344517 ABCC8Q09428 1581 aa24.83■■□□□ 1.57
ABCB10-201ENST00000344517 SOGA1O94964 1423 aa24.77■■□□□ 1.56
ABCB10-201ENST00000344517 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.55
ABCB10-201ENST00000344517 NEUROD1Q13562 356 aa24.7■■□□□ 1.54
ABCB10-201ENST00000344517 ACIN1Q9UKV3 1341 aaKnown RBP24.64■■□□□ 1.53
ABCB10-201ENST00000344517 P3H3Q8IVL6 736 aa24.63■■□□□ 1.53
ABCB10-201ENST00000344517 CEP162Q5TB80 1403 aa24.6■■□□□ 1.53
ABCB10-201ENST00000344517 BAZ1AQ9NRL2 1556 aaPredicted RBP24.56■■□□□ 1.52
ABCB10-201ENST00000344517 RUSC2Q8N2Y8 1516 aa24.55■■□□□ 1.52
ABCB10-201ENST00000344517 WRNQ14191 1432 aaPredicted RBP eCLIP24.43■■□□□ 1.51e-6■■■■■ 58.5
ABCB10-201ENST00000344517 FAM50AQ14320 339 aaKnown RBP24.4■■□□□ 1.5
ABCB10-201ENST00000344517 ZNF316A6NFI3 1004 aaPredicted RBP24.37■■□□□ 1.49
ABCB10-201ENST00000344517 ARID3CA6NKF2 412 aa24.33■■□□□ 1.48
ABCB10-201ENST00000344517 CLIP1P30622 1438 aa24.32■■□□□ 1.48
ABCB10-201ENST00000344517 TNIKQ9UKE5 1360 aa24.26■■□□□ 1.47
ABCB10-201ENST00000344517 BAZ1BQ9UIG0 1483 aaKnown RBP24.25■■□□□ 1.47
ABCB10-201ENST00000344517 CNGB1Q14028 1251 aaPredicted RBP24.21■■□□□ 1.47
ABCB10-201ENST00000344517 GOLGA3Q08378 1498 aa24.21■■□□□ 1.47
ABCB10-201ENST00000344517 MIER1Q8N108 512 aa24.2■■□□□ 1.46
ABCB10-201ENST00000344517 SMARCA4P51532 1647 aa24.2■■□□□ 1.46
ABCB10-201ENST00000344517 TOP2AP11388 1531 aaKnown RBP24.2■■□□□ 1.46
ABCB10-201ENST00000344517 HIRIP3Q9BW71 556 aaPredicted RBP24.11■■□□□ 1.45
ABCB10-201ENST00000344517 KANK4Q5T7N3 995 aaPredicted RBP24.1■■□□□ 1.45
ABCB10-201ENST00000344517 SMARCA2P51531 1590 aa24.1■■□□□ 1.45
ABCB10-201ENST00000344517 BCANQ96GW7 911 aa24.05■■□□□ 1.44
ABCB10-201ENST00000344517 RAPGEF2Q9Y4G8 1499 aa24■■□□□ 1.43
ABCB10-201ENST00000344517 CEP164Q9UPV0 1460 aa23.99■■□□□ 1.43
ABCB10-201ENST00000344517 EEA1Q15075 1411 aa23.99■■□□□ 1.43
ABCB10-201ENST00000344517 ATAD2BQ9ULI0 1458 aa23.94■■□□□ 1.42
ABCB10-201ENST00000344517 POLR3GLQ9BT43 218 aa23.9■■□□□ 1.42
ABCB10-201ENST00000344517 TRIM52Q96A61 297 aa23.83■■□□□ 1.4
ABCB10-201ENST00000344517 DDX10Q13206 875 aaKnown RBP23.82■■□□□ 1.4
ABCB10-201ENST00000344517 SIN3AQ96ST3 1273 aa23.81■■□□□ 1.4
ABCB10-201ENST00000344517 CHIC2Q9UKJ5 165 aa23.81■■□□□ 1.4
ABCB10-201ENST00000344517 VPS8Q8N3P4 1428 aa23.8■■□□□ 1.4
ABCB10-201ENST00000344517 FBLN2P98095 1184 aa23.79■■□□□ 1.4
ABCB10-201ENST00000344517 NEFLP07196 543 aa23.75■■□□□ 1.39
ABCB10-201ENST00000344517 SYNJ1O43426 1573 aa23.75■■□□□ 1.39
ABCB10-201ENST00000344517 KIF27Q86VH2 1401 aa23.74■■□□□ 1.39
ABCB10-201ENST00000344517 CUX2O14529 1486 aa23.71■■□□□ 1.39
ABCB10-201ENST00000344517 BICRAQ9NZM4 1560 aa23.65■■□□□ 1.38
ABCB10-201ENST00000344517 ZNF326Q5BKZ1 582 aaKnown RBP23.63■■□□□ 1.37
ABCB10-201ENST00000344517 UNC13AQ9UPW8 1703 aa23.62■■□□□ 1.37
ABCB10-201ENST00000344517 ERICH6Q7L0X2 663 aa23.62■■□□□ 1.37
ABCB10-201ENST00000344517 RRP7BPQ9NSQ0 103 aa23.59■■□□□ 1.37
ABCB10-201ENST00000344517 CARMIL1Q5VZK9 1371 aa23.58■■□□□ 1.36
ABCB10-201ENST00000344517 SENP3-EIF4A1A0A087X0R7 540 aa23.55■■□□□ 1.36
ABCB10-201ENST00000344517 KCNH8Q96L42 1107 aa23.55■■□□□ 1.36
ABCB10-201ENST00000344517 ZNF777Q9ULD5 760 aaPredicted RBP23.54■■□□□ 1.36
ABCB10-201ENST00000344517 CCNB3Q8WWL7 1395 aa23.53■■□□□ 1.36
ABCB10-201ENST00000344517 FKBP8Q14318 412 aa23.49■■□□□ 1.35
ABCB10-201ENST00000344517 TDRD9Q8NDG6 1382 aaKnown RBP23.48■■□□□ 1.35
ABCB10-201ENST00000344517 MTUS2Q5JR59 1369 aa23.47■■□□□ 1.35
ABCB10-201ENST00000344517 KIF21BO75037 1637 aa23.45■■□□□ 1.34
ABCB10-201ENST00000344517 BCL11AQ9H165 835 aa23.44■■□□□ 1.34
ABCB10-201ENST00000344517 EIF4G1Q04637 1599 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms