RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 NISCHQ9Y2I1 1504 aa27.23■■□□□ 1.95
RBFOX1-212ENST00000550418 DCAF8L2P0C7V8 631 aa26.56■■□□□ 1.84
RBFOX1-212ENST00000550418 SUPT5HO00267 1087 aaKnown RBP25.83■■□□□ 1.72
RBFOX1-212ENST00000550418 SHROOM4Q9ULL8 1493 aa25.41■■□□□ 1.66
RBFOX1-212ENST00000550418 PELP1Q8IZL8 1130 aaKnown RBP25.1■■□□□ 1.61
RBFOX1-212ENST00000550418 PCGF6Q9BYE7 350 aa25.01■■□□□ 1.59
RBFOX1-212ENST00000550418 EHMT2Q96KQ7 1210 aa24.75■■□□□ 1.55
RBFOX1-212ENST00000550418 MYT1Q01538 1121 aa24.62■■□□□ 1.53
RBFOX1-212ENST00000550418 CENPBP07199 599 aaPredicted RBP24.59■■□□□ 1.53
RBFOX1-212ENST00000550418 ZEB1P37275 1124 aaPredicted RBP24.57■■□□□ 1.52
RBFOX1-212ENST00000550418 HRCP23327 699 aa24.28■■□□□ 1.48
RBFOX1-212ENST00000550418 FAM9AQ8IZU1 332 aaPredicted RBP24.28■■□□□ 1.48
RBFOX1-212ENST00000550418 APLP2Q06481 763 aa24.19■■□□□ 1.46
RBFOX1-212ENST00000550418 CCER1Q8TC90 406 aaPredicted RBP24.16■■□□□ 1.46
RBFOX1-212ENST00000550418 TTBK1Q5TCY1 1321 aaPredicted RBP24.08■■□□□ 1.44
RBFOX1-212ENST00000550418 ERICH6Q7L0X2 663 aa24.03■■□□□ 1.44
RBFOX1-212ENST00000550418 TRIM26Q12899 539 aaPredicted RBP23.89■■□□□ 1.41
RBFOX1-212ENST00000550418 YTHDC1Q96MU7 727 aaKnown RBP23.87■■□□□ 1.41
RBFOX1-212ENST00000550418 TRIM41Q8WV44 630 aa23.86■■□□□ 1.41
RBFOX1-212ENST00000550418 PPARGC1BQ86YN6 1023 aaKnown RBP23.72■■□□□ 1.39
RBFOX1-212ENST00000550418 NEFLP07196 543 aa23.65■■□□□ 1.38
RBFOX1-212ENST00000550418 CHIC1Q5VXU3 224 aa23.48■■□□□ 1.35
RBFOX1-212ENST00000550418 LOC105371045A0A1W2PR82 267 aa23.42■■□□□ 1.34
RBFOX1-212ENST00000550418 UBTFP17480 764 aaKnown RBP23.39■■□□□ 1.34
RBFOX1-212ENST00000550418 RANGAP1P46060 587 aaPredicted RBP23.39■■□□□ 1.34
RBFOX1-212ENST00000550418 DIEXFQ68CQ4 756 aaKnown RBP23.21■■□□□ 1.31
RBFOX1-212ENST00000550418 ABCC9O60706 1549 aa23.16■■□□□ 1.3
RBFOX1-212ENST00000550418 GTF3C3Q9Y5Q9 886 aa23.11■■□□□ 1.29
RBFOX1-212ENST00000550418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.06■■□□□ 1.28
RBFOX1-212ENST00000550418 ATP1B4Q9UN42 357 aaPredicted RBP23■■□□□ 1.27
RBFOX1-212ENST00000550418 HNRNPUL2Q1KMD3 747 aaKnown RBP22.91■■□□□ 1.26
RBFOX1-212ENST00000550418 ACIN1Q9UKV3 1341 aaKnown RBP22.88■■□□□ 1.25
RBFOX1-212ENST00000550418 PABPN1Q86U42 306 aaKnown RBP eCLIP22.85■■□□□ 1.25
RBFOX1-212ENST00000550418 DAXXQ9UER7 740 aaPredicted RBP22.76■■□□□ 1.23
RBFOX1-212ENST00000550418 ITGAEP38570 1179 aa22.72■■□□□ 1.23
RBFOX1-212ENST00000550418 RTL5Q5HYW3 569 aaPredicted RBP22.7■■□□□ 1.22
RBFOX1-212ENST00000550418 ZCCHC6Q5VYS8 1495 aaKnown RBP22.63■■□□□ 1.21
RBFOX1-212ENST00000550418 ZNF316A6NFI3 1004 aaPredicted RBP22.58■■□□□ 1.21
RBFOX1-212ENST00000550418 BCANQ96GW7 911 aa22.58■■□□□ 1.21
RBFOX1-212ENST00000550418 POLR3GLQ9BT43 218 aa22.45■■□□□ 1.18
RBFOX1-212ENST00000550418 SCAF1Q9H7N4 1312 aaKnown RBP22.44■■□□□ 1.18
RBFOX1-212ENST00000550418 CDK11AQ9UQ88 783 aaPredicted RBP22.39■■□□□ 1.17
RBFOX1-212ENST00000550418 CCDC180Q9P1Z9 1646 aa22.37■■□□□ 1.17
RBFOX1-212ENST00000550418 NEUROD1Q13562 356 aa22.37■■□□□ 1.17
RBFOX1-212ENST00000550418 CNGB1Q14028 1251 aaPredicted RBP22.35■■□□□ 1.17
RBFOX1-212ENST00000550418 SCRIBQ14160 1630 aa22.33■■□□□ 1.17
RBFOX1-212ENST00000550418 DCAF1Q9Y4B6 1507 aa22.28■■□□□ 1.16
RBFOX1-212ENST00000550418 CLSPNQ9HAW4 1339 aa22.27■■□□□ 1.16
RBFOX1-212ENST00000550418 ANP32CO43423 234 aa22.24■■□□□ 1.15
RBFOX1-212ENST00000550418 FAM50AQ14320 339 aaKnown RBP22.08■■□□□ 1.12
RBFOX1-212ENST00000550418 MYT1LQ9UL68 1186 aa22.06■■□□□ 1.12
RBFOX1-212ENST00000550418 FKBP8Q14318 412 aa22.05■■□□□ 1.12
RBFOX1-212ENST00000550418 ANP32AP39687 249 aaKnown RBP21.99■■□□□ 1.11
RBFOX1-212ENST00000550418 TRIM52Q96A61 297 aa21.87■■□□□ 1.09
RBFOX1-212ENST00000550418 MIER1Q8N108 512 aa21.86■■□□□ 1.09
RBFOX1-212ENST00000550418 EIF5BO60841 1220 aaKnown RBP21.84■■□□□ 1.09
RBFOX1-212ENST00000550418 FBLN2P98095 1184 aa21.83■■□□□ 1.09
RBFOX1-212ENST00000550418 CSRNP3Q8WYN3 585 aa21.82■■□□□ 1.08
RBFOX1-212ENST00000550418 RSF1Q96T23 1441 aaPredicted RBP21.78■■□□□ 1.08
RBFOX1-212ENST00000550418 ANP32EQ9BTT0 268 aa21.76■■□□□ 1.07
RBFOX1-212ENST00000550418 NPM2Q86SE8 214 aaKnown RBP21.75■■□□□ 1.07
RBFOX1-212ENST00000550418 MYO15BQ96JP2 1530 aa21.73■■□□□ 1.07
RBFOX1-212ENST00000550418 HNRNPUQ00839 825 aaKnown RBP eCLIP21.71■■□□□ 1.07
RBFOX1-212ENST00000550418 DDX10Q13206 875 aaKnown RBP21.71■■□□□ 1.07
RBFOX1-212ENST00000550418 NBR1Q14596 966 aa21.66■■□□□ 1.06
RBFOX1-212ENST00000550418 ZNF326Q5BKZ1 582 aaKnown RBP21.65■■□□□ 1.06
RBFOX1-212ENST00000550418 RB1CC1Q8TDY2 1594 aa21.64■■□□□ 1.05
RBFOX1-212ENST00000550418 SLC4A1APQ9BWU0 796 aaKnown RBP21.63■■□□□ 1.05
RBFOX1-212ENST00000550418 P3H3Q8IVL6 736 aa21.62■■□□□ 1.05
RBFOX1-212ENST00000550418 ZBTB47Q9UFB7 747 aaPredicted RBP21.6■■□□□ 1.05
RBFOX1-212ENST00000550418 NACADO15069 1562 aa21.58■■□□□ 1.04
RBFOX1-212ENST00000550418 CECR2Q9BXF3 1484 aa21.56■■□□□ 1.04
RBFOX1-212ENST00000550418 GLIPR1L2Q4G1C9 344 aa21.55■■□□□ 1.04
RBFOX1-212ENST00000550418 CCDC136Q96JN2 1154 aa21.5■■□□□ 1.03
RBFOX1-212ENST00000550418 FAM9BQ8IZU0 186 aa21.49■■□□□ 1.03
RBFOX1-212ENST00000550418 TONSLQ96HA7 1378 aa21.49■■□□□ 1.03
RBFOX1-212ENST00000550418 CANXP27824 592 aaKnown RBP21.47■■□□□ 1.03
RBFOX1-212ENST00000550418 ARID3CA6NKF2 412 aa21.44■■□□□ 1.02
RBFOX1-212ENST00000550418 IRX6P78412 446 aaPredicted RBP21.43■■□□□ 1.02
RBFOX1-212ENST00000550418 BCL11AQ9H165 835 aa21.4■■□□□ 1.02
RBFOX1-212ENST00000550418 SUPT16HQ9Y5B9 1047 aaKnown RBP21.37■■□□□ 1.01
RBFOX1-212ENST00000550418 ANP32BQ92688 251 aaKnown RBP21.33■■□□□ 1.01
RBFOX1-212ENST00000550418 MRS2Q9HD23 443 aa21.31■■□□□ 1
RBFOX1-212ENST00000550418 UPF2Q9HAU5 1272 aaKnown RBP21.28■■□□□ 1
RBFOX1-212ENST00000550418 HIRIP3Q9BW71 556 aaPredicted RBP21.24■□□□□ 0.99
RBFOX1-212ENST00000550418 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
RBFOX1-212ENST00000550418 TMC1Q8TDI8 760 aa21.23■□□□□ 0.99
RBFOX1-212ENST00000550418 SALL2Q9Y467 1007 aaPredicted RBP21.22■□□□□ 0.99
RBFOX1-212ENST00000550418 NPM1P06748 294 aaKnown RBP eCLIP21.21■□□□□ 0.99
RBFOX1-212ENST00000550418 BAZ1AQ9NRL2 1556 aaPredicted RBP21.2■□□□□ 0.98
RBFOX1-212ENST00000550418 HSP90AA1P07900 732 aaKnown RBP21.19■□□□□ 0.98
RBFOX1-212ENST00000550418 BAZ1BQ9UIG0 1483 aaKnown RBP21.19■□□□□ 0.98
RBFOX1-212ENST00000550418 WRNQ14191 1432 aaPredicted RBP eCLIP21.16■□□□□ 0.98
RBFOX1-212ENST00000550418 ARXQ96QS3 562 aa21.15■□□□□ 0.98
RBFOX1-212ENST00000550418 CLIP1P30622 1438 aa21.11■□□□□ 0.97
RBFOX1-212ENST00000550418 DDRGK1Q96HY6 314 aa21.11■□□□□ 0.97
RBFOX1-212ENST00000550418 CEP162Q5TB80 1403 aa21.11■□□□□ 0.97
RBFOX1-212ENST00000550418 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.1■□□□□ 0.97
RBFOX1-212ENST00000550418 RBM19Q9Y4C8 960 aaKnown RBP21.09■□□□□ 0.97
RBFOX1-212ENST00000550418 PPP4R2Q9NY27 417 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms