RNA–Protein interactions for RNA: ENST00000428459.6

NDUFA13-201, Transcript of NADH:ubiquinone oxidoreductase subunit A13, humanhuman

TSL 2 BASIC

Gene NDUFA13, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA13-201ENST00000428459 NISCHQ9Y2I1 1504 aa47.5■■■■■ 5.19
NDUFA13-201ENST00000428459 ABCC9O60706 1549 aa43.03■■■■■ 4.48
NDUFA13-201ENST00000428459 CCDC180Q9P1Z9 1646 aa42.66■■■■■ 4.42
NDUFA13-201ENST00000428459 RB1CC1Q8TDY2 1594 aa40.74■■■■■ 4.11
NDUFA13-201ENST00000428459 DNAJC5BQ9UF47 199 aa40.45■■■■■ 4.07
NDUFA13-201ENST00000428459 NACADO15069 1562 aa40.37■■■■■ 4.05
NDUFA13-201ENST00000428459 DCAF8L2P0C7V8 631 aa40.34■■■■■ 4.05
NDUFA13-201ENST00000428459 PABPN1Q86U42 306 aaKnown RBP eCLIP40.04■■■■■ 4
NDUFA13-201ENST00000428459 UNC13AQ9UPW8 1703 aa39.83■■■■□ 3.97
NDUFA13-201ENST00000428459 MYO15BQ96JP2 1530 aa39.65■■■■□ 3.94
NDUFA13-201ENST00000428459 BICRAQ9NZM4 1560 aa39.57■■■■□ 3.92
NDUFA13-201ENST00000428459 ZCCHC6Q5VYS8 1495 aaKnown RBP39.35■■■■□ 3.89
NDUFA13-201ENST00000428459 DCAF1Q9Y4B6 1507 aa39.11■■■■□ 3.85
NDUFA13-201ENST00000428459 SCRIBQ14160 1630 aa39.06■■■■□ 3.84
NDUFA13-201ENST00000428459 SHROOM4Q9ULL8 1493 aa38.9■■■■□ 3.82
NDUFA13-201ENST00000428459 CC2D2AQ9P2K1 1620 aa38.78■■■■□ 3.8
NDUFA13-201ENST00000428459 CECR2Q9BXF3 1484 aa38.73■■■■□ 3.79
NDUFA13-201ENST00000428459 EIF4G1Q04637 1599 aaKnown RBP38.65■■■■□ 3.78
NDUFA13-201ENST00000428459 NCAPD3P42695 1498 aa37.26■■■■□ 3.55
NDUFA13-201ENST00000428459 ATAD2BQ9ULI0 1458 aa37.2■■■■□ 3.54
NDUFA13-201ENST00000428459 DNAJC5Q9H3Z4 198 aa37.19■■■■□ 3.54
NDUFA13-201ENST00000428459 ERCC6Q03468 1493 aa37.16■■■■□ 3.54
NDUFA13-201ENST00000428459 SMARCA4P51532 1647 aa37.13■■■■□ 3.53
NDUFA13-201ENST00000428459 SMARCA2P51531 1590 aa37.05■■■■□ 3.52
NDUFA13-201ENST00000428459 CUX2O14529 1486 aa37.02■■■■□ 3.52
NDUFA13-201ENST00000428459 HMGXB3Q12766 1538 aa37■■■■□ 3.51
NDUFA13-201ENST00000428459 NESP48681 1621 aa36.9■■■■□ 3.5
NDUFA13-201ENST00000428459 BAZ1AQ9NRL2 1556 aaPredicted RBP36.88■■■■□ 3.49
NDUFA13-201ENST00000428459 BAZ1BQ9UIG0 1483 aaKnown RBP36.87■■■■□ 3.49
NDUFA13-201ENST00000428459 PEG3Q9GZU2 1588 aa36.66■■■■□ 3.46
NDUFA13-201ENST00000428459 MROH2BQ7Z745 1585 aa36.66■■■■□ 3.46
NDUFA13-201ENST00000428459 THOC2Q8NI27 1593 aaKnown RBP36.51■■■■□ 3.44
NDUFA13-201ENST00000428459 LAMC3Q9Y6N6 1575 aa36.48■■■■□ 3.43
NDUFA13-201ENST00000428459 KIF21AQ7Z4S6 1674 aa36.39■■■■□ 3.42
NDUFA13-201ENST00000428459 PDS5BQ9NTI5 1447 aa36.29■■■■□ 3.4
NDUFA13-201ENST00000428459 WIZO95785 1651 aa36.23■■■■□ 3.39
NDUFA13-201ENST00000428459 CADPSQ9ULU8 1353 aa36.15■■■■□ 3.38
NDUFA13-201ENST00000428459 MRC2Q9UBG0 1479 aa36.05■■■■□ 3.36
NDUFA13-201ENST00000428459 WDR62O43379 1518 aa35.93■■■■□ 3.34
NDUFA13-201ENST00000428459 CEP164Q9UPV0 1460 aa35.88■■■■□ 3.33
NDUFA13-201ENST00000428459 FANCD2Q9BXW9 1451 aa35.82■■■■□ 3.32
NDUFA13-201ENST00000428459 RSF1Q96T23 1441 aaPredicted RBP35.79■■■■□ 3.32
NDUFA13-201ENST00000428459 TOP2AP11388 1531 aaKnown RBP35.72■■■■□ 3.31
NDUFA13-201ENST00000428459 TRIM41Q8WV44 630 aa35.71■■■■□ 3.31
NDUFA13-201ENST00000428459 CFTRP13569 1480 aa35.7■■■■□ 3.31
NDUFA13-201ENST00000428459 URB2Q14146 1524 aaKnown RBP35.54■■■■□ 3.28
NDUFA13-201ENST00000428459 PRDM2Q13029 1718 aa35.32■■■■□ 3.25
NDUFA13-201ENST00000428459 CCDC88BA6NC98 1476 aa35.32■■■■□ 3.24
NDUFA13-201ENST00000428459 OSCARQ8IYS5 282 aa35.29■■■■□ 3.24
NDUFA13-201ENST00000428459 ZNF608Q9ULD9 1512 aaPredicted RBP35.17■■■■□ 3.22
NDUFA13-201ENST00000428459 IFT140Q96RY7 1462 aa35.13■■■■□ 3.21
NDUFA13-201ENST00000428459 TOPBP1Q92547 1522 aa35.11■■■■□ 3.21
NDUFA13-201ENST00000428459 EIF4G3O43432 1585 aaKnown RBP34.96■■■■□ 3.19
NDUFA13-201ENST00000428459 DNMBPQ6XZF7 1577 aa34.96■■■■□ 3.19
NDUFA13-201ENST00000428459 RIMBP3CA6NJZ7 1639 aa34.95■■■■□ 3.18
NDUFA13-201ENST00000428459 RIMBP3BA6NNM3 1639 aa34.95■■■■□ 3.18
NDUFA13-201ENST00000428459 RIMBP3Q9UFD9 1639 aa34.95■■■■□ 3.18
NDUFA13-201ENST00000428459 ABCC8Q09428 1581 aa34.9■■■■□ 3.18
NDUFA13-201ENST00000428459 ARHGEF11O15085 1522 aa34.81■■■■□ 3.16
NDUFA13-201ENST00000428459 AQRO60306 1485 aaKnown RBP eCLIP34.81■■■■□ 3.161e-8■■■□□ 15.4
NDUFA13-201ENST00000428459 TARBP1Q13395 1621 aaKnown RBP34.78■■■■□ 3.16
NDUFA13-201ENST00000428459 POLA1P09884 1462 aaPredicted RBP34.75■■■■□ 3.15
NDUFA13-201ENST00000428459 CHD1O14646 1710 aa34.72■■■■□ 3.15
NDUFA13-201ENST00000428459 FBLN2P98095 1184 aa34.68■■■■□ 3.14
NDUFA13-201ENST00000428459 RAD54L2Q9Y4B4 1467 aa34.67■■■■□ 3.14
NDUFA13-201ENST00000428459 CYB5RLQ6IPT4 315 aa34.58■■■■□ 3.13
NDUFA13-201ENST00000428459 TDRD9Q8NDG6 1382 aaKnown RBP34.57■■■■□ 3.12
NDUFA13-201ENST00000428459 SOGA1O94964 1423 aa34.56■■■■□ 3.12
NDUFA13-201ENST00000428459 FGD5Q6ZNL6 1462 aa34.53■■■■□ 3.12
NDUFA13-201ENST00000428459 SNAPC4Q5SXM2 1469 aa34.48■■■■□ 3.11
NDUFA13-201ENST00000428459 ARAP1Q96P48 1450 aa34.47■■■■□ 3.11
NDUFA13-201ENST00000428459 CUX1P39880 1505 aa34.45■■■■□ 3.11
NDUFA13-201ENST00000428459 WDR97A6NE52 1622 aa34.33■■■■□ 3.09
NDUFA13-201ENST00000428459 TRHP20396 242 aaPredicted RBP34.31■■■■□ 3.08
NDUFA13-201ENST00000428459 CHMP7Q8WUX9 453 aaPredicted RBP34.31■■■■□ 3.08
NDUFA13-201ENST00000428459 CLASP1Q7Z460 1538 aa34.28■■■■□ 3.08
NDUFA13-201ENST00000428459 GRIN2BQ13224 1484 aa34.27■■■■□ 3.08
NDUFA13-201ENST00000428459 MAGI1Q96QZ7 1491 aaPredicted RBP34.27■■■■□ 3.08
NDUFA13-201ENST00000428459 SYNJ1O43426 1573 aa34.24■■■■□ 3.07
NDUFA13-201ENST00000428459 SUPT5HO00267 1087 aaKnown RBP34.21■■■■□ 3.07
NDUFA13-201ENST00000428459 SYNJ2O15056 1496 aa34.19■■■■□ 3.06
NDUFA13-201ENST00000428459 PBRM1Q86U86 1689 aa34.17■■■■□ 3.06
NDUFA13-201ENST00000428459 GAPVD1Q14C86 1478 aa34.14■■■■□ 3.06
NDUFA13-201ENST00000428459 ABCA10Q8WWZ4 1543 aa34.05■■■■□ 3.04
NDUFA13-201ENST00000428459 ABCA5Q8WWZ7 1642 aa34.05■■■■□ 3.04
NDUFA13-201ENST00000428459 WRNQ14191 1432 aaPredicted RBP eCLIP33.89■■■■□ 3.02
NDUFA13-201ENST00000428459 GRIN2AQ12879 1464 aa33.86■■■■□ 3.01
NDUFA13-201ENST00000428459 ADAMTS12P58397 1594 aa33.85■■■■□ 3.01
NDUFA13-201ENST00000428459 ERCC6L2Q5T890 1561 aa33.82■■■■□ 3
NDUFA13-201ENST00000428459 TOP2BQ02880 1626 aa33.8■■■■□ 3
NDUFA13-201ENST00000428459 BIVM-ERCC5R4GMW8 1640 aa33.8■■■■□ 3
NDUFA13-201ENST00000428459 CEP170Q5SW79 1584 aa33.78■■■■□ 3
NDUFA13-201ENST00000428459 NUP160Q12769 1436 aa33.71■■■□□ 2.99
NDUFA13-201ENST00000428459 FHAD1B1AJZ9 1412 aa33.68■■■□□ 2.98
NDUFA13-201ENST00000428459 ERICH3Q5RHP9 1530 aa33.61■■■□□ 2.97
NDUFA13-201ENST00000428459 SHROOM2Q13796 1616 aa33.57■■■□□ 2.96
NDUFA13-201ENST00000428459 PRG4Q92954 1404 aaPredicted RBP33.46■■■□□ 2.95
NDUFA13-201ENST00000428459 AEBP2Q6ZN18 517 aaPredicted RBP33.43■■■□□ 2.94
NDUFA13-201ENST00000428459 RUSC2Q8N2Y8 1516 aa33.38■■■□□ 2.93
NDUFA13-201ENST00000428459 JPH4Q96JJ6 628 aa33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms