RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 NISCHQ9Y2I1 1504 aa31.56■■■□□ 2.64
SYNCRIP-202ENST00000369622 SHROOM4Q9ULL8 1493 aa27.78■■■□□ 2.04
SYNCRIP-202ENST00000369622 SUPT5HO00267 1087 aaKnown RBP27.41■■□□□ 1.98
SYNCRIP-202ENST00000369622 DCAF8L2P0C7V8 631 aa27.04■■□□□ 1.92
SYNCRIP-202ENST00000369622 HRCP23327 699 aa26.68■■□□□ 1.86
SYNCRIP-202ENST00000369622 ZCCHC6Q5VYS8 1495 aaKnown RBP26.66■■□□□ 1.86
SYNCRIP-202ENST00000369622 PPARGC1BQ86YN6 1023 aaKnown RBP26.6■■□□□ 1.85
SYNCRIP-202ENST00000369622 PELP1Q8IZL8 1130 aaKnown RBP26.44■■□□□ 1.82
SYNCRIP-202ENST00000369622 CHIC1Q5VXU3 224 aa26.43■■□□□ 1.82
SYNCRIP-202ENST00000369622 CCDC180Q9P1Z9 1646 aa26.38■■□□□ 1.81
SYNCRIP-202ENST00000369622 MYO15BQ96JP2 1530 aa26.27■■□□□ 1.8
SYNCRIP-202ENST00000369622 PCGF6Q9BYE7 350 aa26.17■■□□□ 1.78
SYNCRIP-202ENST00000369622 LOC105371045A0A1W2PR82 267 aa25.92■■□□□ 1.74
SYNCRIP-202ENST00000369622 SCAF1Q9H7N4 1312 aaKnown RBP25.81■■□□□ 1.72
SYNCRIP-202ENST00000369622 DCAF1Q9Y4B6 1507 aa25.58■■□□□ 1.69
SYNCRIP-202ENST00000369622 MYT1Q01538 1121 aa25.47■■□□□ 1.67
SYNCRIP-202ENST00000369622 EHMT2Q96KQ7 1210 aa25.45■■□□□ 1.67
SYNCRIP-202ENST00000369622 FAM9AQ8IZU1 332 aaPredicted RBP25.43■■□□□ 1.66
SYNCRIP-202ENST00000369622 TRIM41Q8WV44 630 aa25.34■■□□□ 1.65
SYNCRIP-202ENST00000369622 TRIM26Q12899 539 aaPredicted RBP25.32■■□□□ 1.64
SYNCRIP-202ENST00000369622 SCRIBQ14160 1630 aa25.27■■□□□ 1.64
SYNCRIP-202ENST00000369622 RSF1Q96T23 1441 aaPredicted RBP25.2■■□□□ 1.62
SYNCRIP-202ENST00000369622 ABCC9O60706 1549 aa25.15■■□□□ 1.62
SYNCRIP-202ENST00000369622 RB1CC1Q8TDY2 1594 aa24.95■■□□□ 1.58
SYNCRIP-202ENST00000369622 NEUROD1Q13562 356 aa24.9■■□□□ 1.58
SYNCRIP-202ENST00000369622 GTF3C3Q9Y5Q9 886 aa24.87■■□□□ 1.57
SYNCRIP-202ENST00000369622 CECR2Q9BXF3 1484 aa24.83■■□□□ 1.57
SYNCRIP-202ENST00000369622 ACIN1Q9UKV3 1341 aaKnown RBP24.82■■□□□ 1.56
SYNCRIP-202ENST00000369622 ZEB1P37275 1124 aaPredicted RBP24.78■■□□□ 1.56
SYNCRIP-202ENST00000369622 MROH2BQ7Z745 1585 aa24.67■■□□□ 1.54
SYNCRIP-202ENST00000369622 TTBK1Q5TCY1 1321 aaPredicted RBP24.64■■□□□ 1.53
SYNCRIP-202ENST00000369622 WIZO95785 1651 aa24.53■■□□□ 1.52
SYNCRIP-202ENST00000369622 NACADO15069 1562 aa24.53■■□□□ 1.52
SYNCRIP-202ENST00000369622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.52■■□□□ 1.52
SYNCRIP-202ENST00000369622 CCER1Q8TC90 406 aaPredicted RBP24.45■■□□□ 1.5
SYNCRIP-202ENST00000369622 CENPBP07199 599 aaPredicted RBP24.37■■□□□ 1.49
SYNCRIP-202ENST00000369622 BCL11AQ9H165 835 aa24.34■■□□□ 1.49
SYNCRIP-202ENST00000369622 YTHDC1Q96MU7 727 aaKnown RBP24.24■■□□□ 1.47
SYNCRIP-202ENST00000369622 UBTFP17480 764 aaKnown RBP24.22■■□□□ 1.47
SYNCRIP-202ENST00000369622 ABCC8Q09428 1581 aa24.21■■□□□ 1.47
SYNCRIP-202ENST00000369622 BAZ1AQ9NRL2 1556 aaPredicted RBP24.19■■□□□ 1.46
SYNCRIP-202ENST00000369622 CCDC88BA6NC98 1476 aa24.16■■□□□ 1.46
SYNCRIP-202ENST00000369622 PABPN1Q86U42 306 aaKnown RBP eCLIP24.15■■□□□ 1.46
SYNCRIP-202ENST00000369622 DIEXFQ68CQ4 756 aaKnown RBP24.13■■□□□ 1.45
SYNCRIP-202ENST00000369622 SOGA1O94964 1423 aa24.09■■□□□ 1.45
SYNCRIP-202ENST00000369622 CSRNP3Q8WYN3 585 aa24.04■■□□□ 1.44
SYNCRIP-202ENST00000369622 CEP162Q5TB80 1403 aa24.03■■□□□ 1.44
SYNCRIP-202ENST00000369622 TOP2AP11388 1531 aaKnown RBP23.99■■□□□ 1.43
SYNCRIP-202ENST00000369622 RANGAP1P46060 587 aaPredicted RBP23.99■■□□□ 1.43
SYNCRIP-202ENST00000369622 EIF4G1Q04637 1599 aaKnown RBP23.96■■□□□ 1.43
SYNCRIP-202ENST00000369622 RUSC2Q8N2Y8 1516 aa23.95■■□□□ 1.42
SYNCRIP-202ENST00000369622 SMARCA4P51532 1647 aa23.94■■□□□ 1.42
SYNCRIP-202ENST00000369622 SMARCA2P51531 1590 aa23.91■■□□□ 1.42
SYNCRIP-202ENST00000369622 HNRNPUL2Q1KMD3 747 aaKnown RBP23.88■■□□□ 1.41
SYNCRIP-202ENST00000369622 TNIKQ9UKE5 1360 aa23.88■■□□□ 1.41
SYNCRIP-202ENST00000369622 PRKCSHP14314 528 aaPredicted RBP23.85■■□□□ 1.41
SYNCRIP-202ENST00000369622 WRNQ14191 1432 aaPredicted RBP eCLIP23.81■■□□□ 1.4
SYNCRIP-202ENST00000369622 ANP32EQ9BTT0 268 aa23.75■■□□□ 1.39
SYNCRIP-202ENST00000369622 APLP2Q06481 763 aa23.72■■□□□ 1.39
SYNCRIP-202ENST00000369622 EEA1Q15075 1411 aa23.7■■□□□ 1.38
SYNCRIP-202ENST00000369622 GOLGA3Q08378 1498 aa23.69■■□□□ 1.38
SYNCRIP-202ENST00000369622 UNC13AQ9UPW8 1703 aa23.67■■□□□ 1.38
SYNCRIP-202ENST00000369622 ZNF316A6NFI3 1004 aaPredicted RBP23.67■■□□□ 1.38
SYNCRIP-202ENST00000369622 CLIP1P30622 1438 aa23.57■■□□□ 1.36
SYNCRIP-202ENST00000369622 MIER1Q8N108 512 aa23.52■■□□□ 1.36
SYNCRIP-202ENST00000369622 CEP164Q9UPV0 1460 aa23.51■■□□□ 1.35
SYNCRIP-202ENST00000369622 SYNJ1O43426 1573 aa23.47■■□□□ 1.35
SYNCRIP-202ENST00000369622 BICRAQ9NZM4 1560 aa23.46■■□□□ 1.35
SYNCRIP-202ENST00000369622 TSHZ2Q9NRE2 1034 aa23.45■■□□□ 1.34
SYNCRIP-202ENST00000369622 RAPGEF2Q9Y4G8 1499 aa23.42■■□□□ 1.34
SYNCRIP-202ENST00000369622 BAZ1BQ9UIG0 1483 aaKnown RBP23.42■■□□□ 1.34
SYNCRIP-202ENST00000369622 ATAD2BQ9ULI0 1458 aa23.39■■□□□ 1.33
SYNCRIP-202ENST00000369622 VPS8Q8N3P4 1428 aa23.37■■□□□ 1.33
SYNCRIP-202ENST00000369622 SUPT16HQ9Y5B9 1047 aaKnown RBP23.35■■□□□ 1.33
SYNCRIP-202ENST00000369622 ITGAEP38570 1179 aa23.28■■□□□ 1.32
SYNCRIP-202ENST00000369622 KIF21BO75037 1637 aa23.28■■□□□ 1.32
SYNCRIP-202ENST00000369622 PEG3Q9GZU2 1588 aa23.25■■□□□ 1.31
SYNCRIP-202ENST00000369622 KANK4Q5T7N3 995 aaPredicted RBP23.23■■□□□ 1.31
SYNCRIP-202ENST00000369622 BCANQ96GW7 911 aa23.21■■□□□ 1.31
SYNCRIP-202ENST00000369622 TOP2BQ02880 1626 aa23.05■■□□□ 1.28
SYNCRIP-202ENST00000369622 DHX57Q6P158 1386 aaKnown RBP23.04■■□□□ 1.28
SYNCRIP-202ENST00000369622 ATP1B4Q9UN42 357 aaPredicted RBP23.01■■□□□ 1.27
SYNCRIP-202ENST00000369622 ARAP1Q96P48 1450 aa22.99■■□□□ 1.27
SYNCRIP-202ENST00000369622 PRXQ9BXM0 1461 aa22.98■■□□□ 1.27
SYNCRIP-202ENST00000369622 KIF27Q86VH2 1401 aa22.97■■□□□ 1.27
SYNCRIP-202ENST00000369622 ANO8Q9HCE9 1232 aaPredicted RBP22.93■■□□□ 1.26
SYNCRIP-202ENST00000369622 ERICH6Q7L0X2 663 aa22.92■■□□□ 1.26
SYNCRIP-202ENST00000369622 P3H3Q8IVL6 736 aa22.92■■□□□ 1.26
SYNCRIP-202ENST00000369622 CLSPNQ9HAW4 1339 aa22.9■■□□□ 1.26
SYNCRIP-202ENST00000369622 CUX1P39880 1505 aa22.9■■□□□ 1.26
SYNCRIP-202ENST00000369622 CCNB3Q8WWL7 1395 aa22.87■■□□□ 1.25
SYNCRIP-202ENST00000369622 ERICH3Q5RHP9 1530 aa22.87■■□□□ 1.25
SYNCRIP-202ENST00000369622 FAM50AQ14320 339 aaKnown RBP22.86■■□□□ 1.25
SYNCRIP-202ENST00000369622 RBM19Q9Y4C8 960 aaKnown RBP22.85■■□□□ 1.25
SYNCRIP-202ENST00000369622 BIVM-ERCC5R4GMW8 1640 aa22.84■■□□□ 1.25
SYNCRIP-202ENST00000369622 NCAPD3P42695 1498 aa22.8■■□□□ 1.24
SYNCRIP-202ENST00000369622 ARHGAP35Q9NRY4 1499 aa22.8■■□□□ 1.24
SYNCRIP-202ENST00000369622 CUX2O14529 1486 aa22.78■■□□□ 1.24
SYNCRIP-202ENST00000369622 RRBP1Q9P2E9 1410 aaKnown RBP22.77■■□□□ 1.24
SYNCRIP-202ENST00000369622 MSH5O43196 834 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms