RNA–Protein interactions for RNA: ENST00000284073.6

MSI2-201, Transcript of musashi RNA binding protein 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MSI2, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-201ENST00000284073 DCAF8L2P0C7V8 631 aa26.18■■□□□ 1.78
MSI2-201ENST00000284073 SUPT5HO00267 1087 aaKnown RBP25.68■■□□□ 1.7
MSI2-201ENST00000284073 PELP1Q8IZL8 1130 aaKnown RBP25.52■■□□□ 1.68
MSI2-201ENST00000284073 EHMT2Q96KQ7 1210 aa25.2■■□□□ 1.62
MSI2-201ENST00000284073 PCGF6Q9BYE7 350 aa24.96■■□□□ 1.59
MSI2-201ENST00000284073 SHROOM4Q9ULL8 1493 aa24.9■■□□□ 1.58
MSI2-201ENST00000284073 MYT1Q01538 1121 aa24.75■■□□□ 1.55
MSI2-201ENST00000284073 ERICH6Q7L0X2 663 aa24.71■■□□□ 1.55
MSI2-201ENST00000284073 CENPBP07199 599 aaPredicted RBP24.7■■□□□ 1.55
MSI2-201ENST00000284073 TTBK1Q5TCY1 1321 aaPredicted RBP24.48■■□□□ 1.51
MSI2-201ENST00000284073 FAM9AQ8IZU1 332 aaPredicted RBP24.33■■□□□ 1.49
MSI2-201ENST00000284073 CCER1Q8TC90 406 aaPredicted RBP24.32■■□□□ 1.48
MSI2-201ENST00000284073 ZEB1P37275 1124 aaPredicted RBP24.29■■□□□ 1.48
MSI2-201ENST00000284073 YTHDC1Q96MU7 727 aaKnown RBP24.28■■□□□ 1.48
MSI2-201ENST00000284073 APLP2Q06481 763 aa24.27■■□□□ 1.48
MSI2-201ENST00000284073 NISCHQ9Y2I1 1504 aa23.97■■□□□ 1.43
MSI2-201ENST00000284073 NEFLP07196 543 aa23.95■■□□□ 1.42
MSI2-201ENST00000284073 HRCP23327 699 aa23.86■■□□□ 1.41
MSI2-201ENST00000284073 RANGAP1P46060 587 aaPredicted RBP23.71■■□□□ 1.39
MSI2-201ENST00000284073 PPARGC1BQ86YN6 1023 aaKnown RBP23.63■■□□□ 1.37
MSI2-201ENST00000284073 TRIM41Q8WV44 630 aa23.54■■□□□ 1.36
MSI2-201ENST00000284073 TRIM26Q12899 539 aaPredicted RBP23.49■■□□□ 1.35
MSI2-201ENST00000284073 ATP1B4Q9UN42 357 aaPredicted RBP23.3■■□□□ 1.32
MSI2-201ENST00000284073 DAXXQ9UER7 740 aaPredicted RBP23.28■■□□□ 1.32
MSI2-201ENST00000284073 UBTFP17480 764 aaKnown RBP23.28■■□□□ 1.32
MSI2-201ENST00000284073 GTF3C3Q9Y5Q9 886 aa23.12■■□□□ 1.29
MSI2-201ENST00000284073 RTL5Q5HYW3 569 aaPredicted RBP23.1■■□□□ 1.29
MSI2-201ENST00000284073 DIEXFQ68CQ4 756 aaKnown RBP23.09■■□□□ 1.29
MSI2-201ENST00000284073 LOC105371045A0A1W2PR82 267 aa23.08■■□□□ 1.29
MSI2-201ENST00000284073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.94■■□□□ 1.26
MSI2-201ENST00000284073 BCANQ96GW7 911 aa22.93■■□□□ 1.26
MSI2-201ENST00000284073 CNGB1Q14028 1251 aaPredicted RBP22.92■■□□□ 1.26
MSI2-201ENST00000284073 POLR3GLQ9BT43 218 aa22.9■■□□□ 1.26
MSI2-201ENST00000284073 HNRNPUL2Q1KMD3 747 aaKnown RBP22.88■■□□□ 1.25
MSI2-201ENST00000284073 ITGAEP38570 1179 aa22.88■■□□□ 1.25
MSI2-201ENST00000284073 ZNF316A6NFI3 1004 aaPredicted RBP22.79■■□□□ 1.24
MSI2-201ENST00000284073 CHIC1Q5VXU3 224 aa22.74■■□□□ 1.23
MSI2-201ENST00000284073 ACIN1Q9UKV3 1341 aaKnown RBP22.66■■□□□ 1.22
MSI2-201ENST00000284073 CLSPNQ9HAW4 1339 aa22.61■■□□□ 1.21
MSI2-201ENST00000284073 CDK11AQ9UQ88 783 aaPredicted RBP22.54■■□□□ 1.2
MSI2-201ENST00000284073 EIF5BO60841 1220 aaKnown RBP22.48■■□□□ 1.19
MSI2-201ENST00000284073 NEUROD1Q13562 356 aa22.23■■□□□ 1.15
MSI2-201ENST00000284073 SCAF1Q9H7N4 1312 aaKnown RBP22.22■■□□□ 1.15
MSI2-201ENST00000284073 ANP32CO43423 234 aa22.21■■□□□ 1.15
MSI2-201ENST00000284073 ANP32AP39687 249 aaKnown RBP22.17■■□□□ 1.14
MSI2-201ENST00000284073 NPM2Q86SE8 214 aaKnown RBP22.16■■□□□ 1.14
MSI2-201ENST00000284073 SLC4A1APQ9BWU0 796 aaKnown RBP22.14■■□□□ 1.14
MSI2-201ENST00000284073 FKBP8Q14318 412 aa22.11■■□□□ 1.13
MSI2-201ENST00000284073 FAM50AQ14320 339 aaKnown RBP22.05■■□□□ 1.12
MSI2-201ENST00000284073 NBR1Q14596 966 aa22.03■■□□□ 1.12
MSI2-201ENST00000284073 MYT1LQ9UL68 1186 aa22.03■■□□□ 1.12
MSI2-201ENST00000284073 GLIPR1L2Q4G1C9 344 aa21.99■■□□□ 1.11
MSI2-201ENST00000284073 BCL11AQ9H165 835 aa21.94■■□□□ 1.1
MSI2-201ENST00000284073 TRIM52Q96A61 297 aa21.93■■□□□ 1.1
MSI2-201ENST00000284073 ZNF326Q5BKZ1 582 aaKnown RBP21.86■■□□□ 1.09
MSI2-201ENST00000284073 CANXP27824 592 aaKnown RBP21.79■■□□□ 1.08
MSI2-201ENST00000284073 ZBTB47Q9UFB7 747 aaPredicted RBP21.76■■□□□ 1.07
MSI2-201ENST00000284073 ARXQ96QS3 562 aa21.76■■□□□ 1.07
MSI2-201ENST00000284073 ANP32EQ9BTT0 268 aa21.71■■□□□ 1.07
MSI2-201ENST00000284073 ANP32BQ92688 251 aaKnown RBP21.71■■□□□ 1.07
MSI2-201ENST00000284073 HNRNPUQ00839 825 aaKnown RBP eCLIP21.69■■□□□ 1.061e-6■■□□□ 13.7
MSI2-201ENST00000284073 IRX6P78412 446 aaPredicted RBP21.61■■□□□ 1.05
MSI2-201ENST00000284073 MIER1Q8N108 512 aa21.61■■□□□ 1.05
MSI2-201ENST00000284073 DDX10Q13206 875 aaKnown RBP21.6■■□□□ 1.05
MSI2-201ENST00000284073 FAM9BQ8IZU0 186 aa21.57■■□□□ 1.04
MSI2-201ENST00000284073 HSP90AA1P07900 732 aaKnown RBP21.56■■□□□ 1.04
MSI2-201ENST00000284073 CCDC136Q96JN2 1154 aa21.55■■□□□ 1.04
MSI2-201ENST00000284073 RTN4Q9NQC3 1192 aaKnown RBP21.52■■□□□ 1.04
MSI2-201ENST00000284073 SALL2Q9Y467 1007 aaPredicted RBP21.49■■□□□ 1.03
MSI2-201ENST00000284073 UPF2Q9HAU5 1272 aaKnown RBP21.45■■□□□ 1.02
MSI2-201ENST00000284073 SLC24A1O60721 1099 aa21.4■■□□□ 1.02
MSI2-201ENST00000284073 DCAF1Q9Y4B6 1507 aa21.35■■□□□ 1.01
MSI2-201ENST00000284073 NEFMP07197 916 aa21.26■□□□□ 0.99
MSI2-201ENST00000284073 TONSLQ96HA7 1378 aa21.25■□□□□ 0.99
MSI2-201ENST00000284073 HIRIP3Q9BW71 556 aaPredicted RBP21.24■□□□□ 0.99
MSI2-201ENST00000284073 P3H3Q8IVL6 736 aa21.22■□□□□ 0.99
MSI2-201ENST00000284073 MRS2Q9HD23 443 aa21.22■□□□□ 0.99
MSI2-201ENST00000284073 TRIM44Q96DX7 344 aaPredicted RBP21.21■□□□□ 0.99
MSI2-201ENST00000284073 TMC1Q8TDI8 760 aa21.19■□□□□ 0.98
MSI2-201ENST00000284073 NAP1L5Q96NT1 182 aaPredicted RBP21.18■□□□□ 0.98
MSI2-201ENST00000284073 LAS1LQ9Y4W2 734 aaKnown RBP21.18■□□□□ 0.98
MSI2-201ENST00000284073 CSRNP3Q8WYN3 585 aa21.15■□□□□ 0.98
MSI2-201ENST00000284073 ARID3CA6NKF2 412 aa21.15■□□□□ 0.98
MSI2-201ENST00000284073 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.15■□□□□ 0.98
MSI2-201ENST00000284073 SUPT16HQ9Y5B9 1047 aaKnown RBP21.14■□□□□ 0.97
MSI2-201ENST00000284073 DDRGK1Q96HY6 314 aa21.13■□□□□ 0.97
MSI2-201ENST00000284073 ERICH6BQ5W0A0 696 aa21.13■□□□□ 0.97
MSI2-201ENST00000284073 DEKP35659 375 aaKnown RBP21.12■□□□□ 0.97
MSI2-201ENST00000284073 TNNT2P45379 298 aaPredicted RBP21.11■□□□□ 0.97
MSI2-201ENST00000284073 SENP3-EIF4A1A0A087X0R7 540 aa21.09■□□□□ 0.97
MSI2-201ENST00000284073 NOP58Q9Y2X3 529 aaKnown RBP21.08■□□□□ 0.97
MSI2-201ENST00000284073 PPM1GO15355 546 aaPredicted RBP21.03■□□□□ 0.96
MSI2-201ENST00000284073 BECN1Q14457 450 aa21.03■□□□□ 0.96
MSI2-201ENST00000284073 ZNF777Q9ULD5 760 aaPredicted RBP20.99■□□□□ 0.95
MSI2-201ENST00000284073 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.98■□□□□ 0.95
MSI2-201ENST00000284073 NCLP19338 710 aaKnown RBP20.97■□□□□ 0.95
MSI2-201ENST00000284073 DNTTIP2Q5QJE6 756 aaKnown RBP20.95■□□□□ 0.94
MSI2-201ENST00000284073 RBM19Q9Y4C8 960 aaKnown RBP20.94■□□□□ 0.94
MSI2-201ENST00000284073 WDR43Q15061 677 aaKnown RBP eCLIP20.93■□□□□ 0.94
MSI2-201ENST00000284073 PTMAP06454 111 aaKnown RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms