Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC33.26■■■□□ 2.92
TRIM42Q8IWZ5 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.13■■■□□ 2.89
TRIM42Q8IWZ5 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
TRIM42Q8IWZ5 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33■■■□□ 2.87
TRIM42Q8IWZ5 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.56■■■□□ 2.8
TRIM42Q8IWZ5 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
TRIM42Q8IWZ5 AL356512.1-201ENST00000607453 1739 ntBASIC32.23■■■□□ 2.75
TRIM42Q8IWZ5 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.17■■■□□ 2.74
TRIM42Q8IWZ5 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
TRIM42Q8IWZ5 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
TRIM42Q8IWZ5 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
TRIM42Q8IWZ5 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.79■■■□□ 2.68
TRIM42Q8IWZ5 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
TRIM42Q8IWZ5 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.78■■■□□ 2.68
TRIM42Q8IWZ5 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
TRIM42Q8IWZ5 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.54■■■□□ 2.64
TRIM42Q8IWZ5 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TRIM42Q8IWZ5 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
TRIM42Q8IWZ5 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TRIM42Q8IWZ5 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.25■■■□□ 2.59
TRIM42Q8IWZ5 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.24■■■□□ 2.59
TRIM42Q8IWZ5 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
TRIM42Q8IWZ5 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
TRIM42Q8IWZ5 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TRIM42Q8IWZ5 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
TRIM42Q8IWZ5 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
TRIM42Q8IWZ5 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
TRIM42Q8IWZ5 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
TRIM42Q8IWZ5 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.44■■■□□ 2.46
TRIM42Q8IWZ5 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
TRIM42Q8IWZ5 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
TRIM42Q8IWZ5 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
TRIM42Q8IWZ5 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
TRIM42Q8IWZ5 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.16■■■□□ 2.42
TRIM42Q8IWZ5 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.11■■■□□ 2.41
TRIM42Q8IWZ5 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
TRIM42Q8IWZ5 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
TRIM42Q8IWZ5 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
TRIM42Q8IWZ5 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30■■■□□ 2.39
TRIM42Q8IWZ5 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30■■■□□ 2.39
TRIM42Q8IWZ5 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
TRIM42Q8IWZ5 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
TRIM42Q8IWZ5 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
TRIM42Q8IWZ5 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
TRIM42Q8IWZ5 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
TRIM42Q8IWZ5 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
TRIM42Q8IWZ5 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
TRIM42Q8IWZ5 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.7■■■□□ 2.34
TRIM42Q8IWZ5 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
TRIM42Q8IWZ5 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.63■■■□□ 2.33
TRIM42Q8IWZ5 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
TRIM42Q8IWZ5 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
TRIM42Q8IWZ5 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
TRIM42Q8IWZ5 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
TRIM42Q8IWZ5 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC29.46■■■□□ 2.31
TRIM42Q8IWZ5 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
TRIM42Q8IWZ5 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
TRIM42Q8IWZ5 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.41■■■□□ 2.3
TRIM42Q8IWZ5 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
TRIM42Q8IWZ5 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
TRIM42Q8IWZ5 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
TRIM42Q8IWZ5 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
TRIM42Q8IWZ5 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.3■■■□□ 2.28
TRIM42Q8IWZ5 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
TRIM42Q8IWZ5 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.26■■■□□ 2.27
TRIM42Q8IWZ5 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
TRIM42Q8IWZ5 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
TRIM42Q8IWZ5 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
TRIM42Q8IWZ5 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
TRIM42Q8IWZ5 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.13■■■□□ 2.25
TRIM42Q8IWZ5 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
TRIM42Q8IWZ5 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
TRIM42Q8IWZ5 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.11■■■□□ 2.25
TRIM42Q8IWZ5 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.09■■■□□ 2.25
TRIM42Q8IWZ5 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.04■■■□□ 2.24
TRIM42Q8IWZ5 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.97■■■□□ 2.23
TRIM42Q8IWZ5 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
TRIM42Q8IWZ5 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC28.95■■■□□ 2.23
TRIM42Q8IWZ5 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
TRIM42Q8IWZ5 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.9■■■□□ 2.22
TRIM42Q8IWZ5 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
TRIM42Q8IWZ5 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
TRIM42Q8IWZ5 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
TRIM42Q8IWZ5 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
TRIM42Q8IWZ5 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
TRIM42Q8IWZ5 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
TRIM42Q8IWZ5 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.86■■■□□ 2.21
TRIM42Q8IWZ5 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
TRIM42Q8IWZ5 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
TRIM42Q8IWZ5 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.75■■■□□ 2.19
TRIM42Q8IWZ5 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
TRIM42Q8IWZ5 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
TRIM42Q8IWZ5 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
TRIM42Q8IWZ5 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.73■■■□□ 2.19
TRIM42Q8IWZ5 AC145285.7-201ENST00000614819 1539 ntBASIC28.73■■■□□ 2.19
TRIM42Q8IWZ5 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.7■■■□□ 2.18
TRIM42Q8IWZ5 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
TRIM42Q8IWZ5 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
TRIM42Q8IWZ5 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
TRIM42Q8IWZ5 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.67■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms