RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 DCAF8L2P0C7V8 631 aa26.95■■□□□ 1.9
PPM1E-201ENST00000308249 PELP1Q8IZL8 1130 aaKnown RBP25.78■■□□□ 1.72
PPM1E-201ENST00000308249 EHMT2Q96KQ7 1210 aa25.5■■□□□ 1.67
PPM1E-201ENST00000308249 SUPT5HO00267 1087 aaKnown RBP25.31■■□□□ 1.64
PPM1E-201ENST00000308249 ERICH6Q7L0X2 663 aa25.09■■□□□ 1.61
PPM1E-201ENST00000308249 APLP2Q06481 763 aa24.78■■□□□ 1.56
PPM1E-201ENST00000308249 TTBK1Q5TCY1 1321 aaPredicted RBP24.65■■□□□ 1.54
PPM1E-201ENST00000308249 CCER1Q8TC90 406 aaPredicted RBP24.65■■□□□ 1.54
PPM1E-201ENST00000308249 SHROOM4Q9ULL8 1493 aa24.41■■□□□ 1.5
PPM1E-201ENST00000308249 MYT1Q01538 1121 aa24.39■■□□□ 1.49
PPM1E-201ENST00000308249 FAM9AQ8IZU1 332 aaPredicted RBP24.38■■□□□ 1.49
PPM1E-201ENST00000308249 PCGF6Q9BYE7 350 aa24.25■■□□□ 1.47
PPM1E-201ENST00000308249 CENPBP07199 599 aaPredicted RBP24.23■■□□□ 1.47
PPM1E-201ENST00000308249 RANGAP1P46060 587 aaPredicted RBP24.2■■□□□ 1.46
PPM1E-201ENST00000308249 ATP1B4Q9UN42 357 aaPredicted RBP24.08■■□□□ 1.44
PPM1E-201ENST00000308249 NEFLP07196 543 aa24.04■■□□□ 1.44
PPM1E-201ENST00000308249 YTHDC1Q96MU7 727 aaKnown RBP23.98■■□□□ 1.43
PPM1E-201ENST00000308249 DAXXQ9UER7 740 aaPredicted RBP23.81■■□□□ 1.4
PPM1E-201ENST00000308249 ZEB1P37275 1124 aaPredicted RBP23.5■■□□□ 1.35
PPM1E-201ENST00000308249 POLR3GLQ9BT43 218 aa23.5■■□□□ 1.35
PPM1E-201ENST00000308249 CNGB1Q14028 1251 aaPredicted RBP23.41■■□□□ 1.34
PPM1E-201ENST00000308249 MYT1LQ9UL68 1186 aa23.4■■□□□ 1.34
PPM1E-201ENST00000308249 UBTFP17480 764 aaKnown RBP23.32■■□□□ 1.32
PPM1E-201ENST00000308249 CHIC1Q5VXU3 224 aa23.25■■□□□ 1.31
PPM1E-201ENST00000308249 PPARGC1BQ86YN6 1023 aaKnown RBP23.2■■□□□ 1.3
PPM1E-201ENST00000308249 SLC4A1APQ9BWU0 796 aaKnown RBP23.19■■□□□ 1.3
PPM1E-201ENST00000308249 ZNF316A6NFI3 1004 aaPredicted RBP23.18■■□□□ 1.3
PPM1E-201ENST00000308249 TRIM41Q8WV44 630 aa23.16■■□□□ 1.3
PPM1E-201ENST00000308249 CLSPNQ9HAW4 1339 aa23.13■■□□□ 1.29
PPM1E-201ENST00000308249 RTL5Q5HYW3 569 aaPredicted RBP23.08■■□□□ 1.29
PPM1E-201ENST00000308249 ITGAEP38570 1179 aa23.04■■□□□ 1.28
PPM1E-201ENST00000308249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23■■□□□ 1.27
PPM1E-201ENST00000308249 HNRNPUL2Q1KMD3 747 aaKnown RBP23■■□□□ 1.27
PPM1E-201ENST00000308249 BCL11AQ9H165 835 aa22.75■■□□□ 1.23
PPM1E-201ENST00000308249 SLC24A1O60721 1099 aa22.61■■□□□ 1.21
PPM1E-201ENST00000308249 ZBTB47Q9UFB7 747 aaPredicted RBP22.57■■□□□ 1.2
PPM1E-201ENST00000308249 HRCP23327 699 aa22.53■■□□□ 1.2
PPM1E-201ENST00000308249 BCANQ96GW7 911 aa22.5■■□□□ 1.19
PPM1E-201ENST00000308249 TRIM26Q12899 539 aaPredicted RBP22.42■■□□□ 1.18
PPM1E-201ENST00000308249 CANXP27824 592 aaKnown RBP22.27■■□□□ 1.16
PPM1E-201ENST00000308249 EIF5BO60841 1220 aaKnown RBP22.26■■□□□ 1.15
PPM1E-201ENST00000308249 CDK11AQ9UQ88 783 aaPredicted RBP22.21■■□□□ 1.15
PPM1E-201ENST00000308249 TRIM52Q96A61 297 aa22.21■■□□□ 1.15
PPM1E-201ENST00000308249 NISCHQ9Y2I1 1504 aa22.2■■□□□ 1.14
PPM1E-201ENST00000308249 ZNF326Q5BKZ1 582 aaKnown RBP22.19■■□□□ 1.14
PPM1E-201ENST00000308249 DIEXFQ68CQ4 756 aaKnown RBP22.17■■□□□ 1.14
PPM1E-201ENST00000308249 NEUROD1Q13562 356 aa22.15■■□□□ 1.14
PPM1E-201ENST00000308249 FAM50AQ14320 339 aaKnown RBP22.13■■□□□ 1.13
PPM1E-201ENST00000308249 NPM2Q86SE8 214 aaKnown RBP22.09■■□□□ 1.13
PPM1E-201ENST00000308249 NEFMP07197 916 aa22.02■■□□□ 1.12
PPM1E-201ENST00000308249 ANP32BQ92688 251 aaKnown RBP22.01■■□□□ 1.11
PPM1E-201ENST00000308249 LOC105371045A0A1W2PR82 267 aa21.98■■□□□ 1.11
PPM1E-201ENST00000308249 ANP32CO43423 234 aa21.96■■□□□ 1.11
PPM1E-201ENST00000308249 GTF3C3Q9Y5Q9 886 aa21.95■■□□□ 1.1
PPM1E-201ENST00000308249 ANP32AP39687 249 aaKnown RBP21.93■■□□□ 1.1
PPM1E-201ENST00000308249 HSP90AA1P07900 732 aaKnown RBP21.93■■□□□ 1.1
PPM1E-201ENST00000308249 ARXQ96QS3 562 aa21.82■■□□□ 1.08
PPM1E-201ENST00000308249 GLIPR1L2Q4G1C9 344 aa21.78■■□□□ 1.08
PPM1E-201ENST00000308249 CDK11BP21127 795 aaKnown RBP21.73■■□□□ 1.07
PPM1E-201ENST00000308249 PLPPR3Q6T4P5 718 aa21.7■■□□□ 1.06
PPM1E-201ENST00000308249 UPF2Q9HAU5 1272 aaKnown RBP21.6■■□□□ 1.05
PPM1E-201ENST00000308249 FBLN2P98095 1184 aa21.58■■□□□ 1.05
PPM1E-201ENST00000308249 NBR1Q14596 966 aa21.55■■□□□ 1.04
PPM1E-201ENST00000308249 A0A0G2JS52 829 aa21.53■■□□□ 1.04
PPM1E-201ENST00000308249 ARID3CA6NKF2 412 aa21.52■■□□□ 1.03
PPM1E-201ENST00000308249 SALL2Q9Y467 1007 aaPredicted RBP21.5■■□□□ 1.03
PPM1E-201ENST00000308249 TULP1O00294 542 aaPredicted RBP21.48■■□□□ 1.03
PPM1E-201ENST00000308249 CHGAP10645 457 aaKnown RBP21.44■■□□□ 1.02
PPM1E-201ENST00000308249 ESF1Q9H501 851 aaKnown RBP21.43■■□□□ 1.02
PPM1E-201ENST00000308249 SCAF1Q9H7N4 1312 aaKnown RBP21.43■■□□□ 1.02
PPM1E-201ENST00000308249 FKBP8Q14318 412 aa21.42■■□□□ 1.02
PPM1E-201ENST00000308249 STAG3Q9UJ98 1225 aa21.41■■□□□ 1.02
PPM1E-201ENST00000308249 ZNF777Q9ULD5 760 aaPredicted RBP21.38■■□□□ 1.01
PPM1E-201ENST00000308249 PLEKHG5O94827 1062 aa21.32■■□□□ 1
PPM1E-201ENST00000308249 FAM9BQ8IZU0 186 aa21.3■■□□□ 1
PPM1E-201ENST00000308249 TPRNQ4KMQ1 711 aa21.27■■□□□ 1
PPM1E-201ENST00000308249 P3H3Q8IVL6 736 aa21.25■□□□□ 0.99
PPM1E-201ENST00000308249 HNRNPUQ00839 825 aaKnown RBP eCLIP21.24■□□□□ 0.99
PPM1E-201ENST00000308249 ZBTB7CA1YPR0 619 aa21.24■□□□□ 0.99
PPM1E-201ENST00000308249 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.24■□□□□ 0.99
PPM1E-201ENST00000308249 NCBP3Q53F19 620 aaKnown RBP21.23■□□□□ 0.99
PPM1E-201ENST00000308249 ACIN1Q9UKV3 1341 aaKnown RBP21.23■□□□□ 0.99
PPM1E-201ENST00000308249 CCDC136Q96JN2 1154 aa21.21■□□□□ 0.99
PPM1E-201ENST00000308249 TRIM44Q96DX7 344 aaPredicted RBP21.18■□□□□ 0.98
PPM1E-201ENST00000308249 NCLP19338 710 aaKnown RBP21.17■□□□□ 0.98
PPM1E-201ENST00000308249 TNNT2P45379 298 aaPredicted RBP21.16■□□□□ 0.98
PPM1E-201ENST00000308249 MYH16Q9H6N6 1097 aa21.14■□□□□ 0.97
PPM1E-201ENST00000308249 TAOK2Q9UL54 1235 aa21.12■□□□□ 0.97
PPM1E-201ENST00000308249 PTMAP06454 111 aaKnown RBP21.1■□□□□ 0.97
PPM1E-201ENST00000308249 DNTTIP2Q5QJE6 756 aaKnown RBP21.1■□□□□ 0.97
PPM1E-201ENST00000308249 SENP3Q9H4L4 574 aaPredicted RBP21.1■□□□□ 0.97
PPM1E-201ENST00000308249 ZRSR1Q15695 479 aaKnown RBP21.09■□□□□ 0.97
PPM1E-201ENST00000308249 WDR43Q15061 677 aaKnown RBP eCLIP21.07■□□□□ 0.96
PPM1E-201ENST00000308249 IRX6P78412 446 aaPredicted RBP21.05■□□□□ 0.96
PPM1E-201ENST00000308249 C14orf37Q86TY3 774 aa21.04■□□□□ 0.96
PPM1E-201ENST00000308249 TMC1Q8TDI8 760 aa21.04■□□□□ 0.96
PPM1E-201ENST00000308249 AMER1Q5JTC6 1135 aaPredicted RBP21.04■□□□□ 0.96
PPM1E-201ENST00000308249 DDX10Q13206 875 aaKnown RBP21.01■□□□□ 0.95
PPM1E-201ENST00000308249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.98■□□□□ 0.95
PPM1E-201ENST00000308249 GOLGA6L22H0YM25 854 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms