RNA–Protein interactions for RNA: ENST00000392876.7

NT5DC3-201, Transcript of 5'-nucleotidase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NT5DC3, Length 7,207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5DC3-201ENST00000392876 DCAF8L2P0C7V8 631 aa27.7■■■□□ 2.02
NT5DC3-201ENST00000392876 SUPT5HO00267 1087 aaKnown RBP26.58■■□□□ 1.85
NT5DC3-201ENST00000392876 SHROOM4Q9ULL8 1493 aa26.07■■□□□ 1.76
NT5DC3-201ENST00000392876 NISCHQ9Y2I1 1504 aa25.96■■□□□ 1.75
NT5DC3-201ENST00000392876 EHMT2Q96KQ7 1210 aa25.96■■□□□ 1.75
NT5DC3-201ENST00000392876 FAM9AQ8IZU1 332 aaPredicted RBP25.15■■□□□ 1.62
NT5DC3-201ENST00000392876 TTBK1Q5TCY1 1321 aaPredicted RBP25.09■■□□□ 1.61
NT5DC3-201ENST00000392876 PCGF6Q9BYE7 350 aa25.08■■□□□ 1.61
NT5DC3-201ENST00000392876 PELP1Q8IZL8 1130 aaKnown RBP25.01■■□□□ 1.59
NT5DC3-201ENST00000392876 APLP2Q06481 763 aa24.96■■□□□ 1.59
NT5DC3-201ENST00000392876 RANGAP1P46060 587 aaPredicted RBP24.65■■□□□ 1.54
NT5DC3-201ENST00000392876 CCER1Q8TC90 406 aaPredicted RBP24.45■■□□□ 1.5
NT5DC3-201ENST00000392876 TRIM41Q8WV44 630 aa24.43■■□□□ 1.5
NT5DC3-201ENST00000392876 CENPBP07199 599 aaPredicted RBP24.38■■□□□ 1.49
NT5DC3-201ENST00000392876 ZEB1P37275 1124 aaPredicted RBP24.29■■□□□ 1.48
NT5DC3-201ENST00000392876 ATP1B4Q9UN42 357 aaPredicted RBP24.24■■□□□ 1.47
NT5DC3-201ENST00000392876 PPARGC1BQ86YN6 1023 aaKnown RBP24.2■■□□□ 1.46
NT5DC3-201ENST00000392876 YTHDC1Q96MU7 727 aaKnown RBP24.19■■□□□ 1.46
NT5DC3-201ENST00000392876 ERICH6Q7L0X2 663 aa24.18■■□□□ 1.46
NT5DC3-201ENST00000392876 UBTFP17480 764 aaKnown RBP24.15■■□□□ 1.46
NT5DC3-201ENST00000392876 NEFLP07196 543 aa23.8■■□□□ 1.4
NT5DC3-201ENST00000392876 TRIM26Q12899 539 aaPredicted RBP23.76■■□□□ 1.39
NT5DC3-201ENST00000392876 LOC105371045A0A1W2PR82 267 aa23.73■■□□□ 1.39
NT5DC3-201ENST00000392876 HRCP23327 699 aa23.71■■□□□ 1.39
NT5DC3-201ENST00000392876 ITGAEP38570 1179 aa23.59■■□□□ 1.37
NT5DC3-201ENST00000392876 CHIC1Q5VXU3 224 aa23.5■■□□□ 1.35
NT5DC3-201ENST00000392876 HNRNPUL2Q1KMD3 747 aaKnown RBP23.46■■□□□ 1.35
NT5DC3-201ENST00000392876 POLR3GLQ9BT43 218 aa23.39■■□□□ 1.34
NT5DC3-201ENST00000392876 CNGB1Q14028 1251 aaPredicted RBP23.36■■□□□ 1.33
NT5DC3-201ENST00000392876 MYT1Q01538 1121 aa23.34■■□□□ 1.33
NT5DC3-201ENST00000392876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.28■■□□□ 1.32
NT5DC3-201ENST00000392876 MYT1LQ9UL68 1186 aa23.11■■□□□ 1.29
NT5DC3-201ENST00000392876 DIEXFQ68CQ4 756 aaKnown RBP23.09■■□□□ 1.29
NT5DC3-201ENST00000392876 DAXXQ9UER7 740 aaPredicted RBP23.07■■□□□ 1.28
NT5DC3-201ENST00000392876 FAM50AQ14320 339 aaKnown RBP22.84■■□□□ 1.25
NT5DC3-201ENST00000392876 BCANQ96GW7 911 aa22.82■■□□□ 1.24
NT5DC3-201ENST00000392876 NEUROD1Q13562 356 aa22.79■■□□□ 1.24
NT5DC3-201ENST00000392876 SLC4A1APQ9BWU0 796 aaKnown RBP22.79■■□□□ 1.24
NT5DC3-201ENST00000392876 GTF3C3Q9Y5Q9 886 aa22.78■■□□□ 1.24
NT5DC3-201ENST00000392876 TRIM52Q96A61 297 aa22.69■■□□□ 1.22
NT5DC3-201ENST00000392876 CLSPNQ9HAW4 1339 aa22.66■■□□□ 1.22
NT5DC3-201ENST00000392876 PABPN1Q86U42 306 aaKnown RBP eCLIP22.64■■□□□ 1.22
NT5DC3-201ENST00000392876 RTL5Q5HYW3 569 aaPredicted RBP22.64■■□□□ 1.21
NT5DC3-201ENST00000392876 ZNF316A6NFI3 1004 aaPredicted RBP22.6■■□□□ 1.21
NT5DC3-201ENST00000392876 ZNF326Q5BKZ1 582 aaKnown RBP22.54■■□□□ 1.2
NT5DC3-201ENST00000392876 ANP32CO43423 234 aa22.46■■□□□ 1.19
NT5DC3-201ENST00000392876 ABCC9O60706 1549 aa22.43■■□□□ 1.18
NT5DC3-201ENST00000392876 ACIN1Q9UKV3 1341 aaKnown RBP22.35■■□□□ 1.17
NT5DC3-201ENST00000392876 CDK11AQ9UQ88 783 aaPredicted RBP22.34■■□□□ 1.17
NT5DC3-201ENST00000392876 P3H3Q8IVL6 736 aa22.33■■□□□ 1.17
NT5DC3-201ENST00000392876 ARID3CA6NKF2 412 aa22.31■■□□□ 1.16
NT5DC3-201ENST00000392876 BCL11AQ9H165 835 aa22.25■■□□□ 1.15
NT5DC3-201ENST00000392876 FBLN2P98095 1184 aa22.22■■□□□ 1.15
NT5DC3-201ENST00000392876 CSRNP3Q8WYN3 585 aa22.18■■□□□ 1.14
NT5DC3-201ENST00000392876 CANXP27824 592 aaKnown RBP22.09■■□□□ 1.13
NT5DC3-201ENST00000392876 NPM2Q86SE8 214 aaKnown RBP22.05■■□□□ 1.12
NT5DC3-201ENST00000392876 FKBP8Q14318 412 aa22.04■■□□□ 1.12
NT5DC3-201ENST00000392876 ZNF777Q9ULD5 760 aaPredicted RBP22.04■■□□□ 1.12
NT5DC3-201ENST00000392876 ZBTB47Q9UFB7 747 aaPredicted RBP22.02■■□□□ 1.12
NT5DC3-201ENST00000392876 SLC24A1O60721 1099 aa22■■□□□ 1.11
NT5DC3-201ENST00000392876 DDX10Q13206 875 aaKnown RBP21.95■■□□□ 1.1
NT5DC3-201ENST00000392876 ANP32AP39687 249 aaKnown RBP21.94■■□□□ 1.1
NT5DC3-201ENST00000392876 HNRNPUQ00839 825 aaKnown RBP eCLIP21.89■■□□□ 1.1
NT5DC3-201ENST00000392876 FAM9BQ8IZU0 186 aa21.88■■□□□ 1.09
NT5DC3-201ENST00000392876 SALL2Q9Y467 1007 aaPredicted RBP21.85■■□□□ 1.09
NT5DC3-201ENST00000392876 TONSLQ96HA7 1378 aa21.83■■□□□ 1.08
NT5DC3-201ENST00000392876 NEFMP07197 916 aa21.79■■□□□ 1.08
NT5DC3-201ENST00000392876 DCAF1Q9Y4B6 1507 aa21.77■■□□□ 1.08
NT5DC3-201ENST00000392876 SCAF1Q9H7N4 1312 aaKnown RBP21.76■■□□□ 1.07
NT5DC3-201ENST00000392876 CHIC2Q9UKJ5 165 aa21.76■■□□□ 1.07
NT5DC3-201ENST00000392876 HIRIP3Q9BW71 556 aaPredicted RBP21.74■■□□□ 1.07
NT5DC3-201ENST00000392876 MIER1Q8N108 512 aa21.73■■□□□ 1.07
NT5DC3-201ENST00000392876 IRX6P78412 446 aaPredicted RBP21.69■■□□□ 1.06
NT5DC3-201ENST00000392876 CHGAP10645 457 aaKnown RBP21.68■■□□□ 1.06
NT5DC3-201ENST00000392876 EIF5BO60841 1220 aaKnown RBP21.67■■□□□ 1.06
NT5DC3-201ENST00000392876 SCRIBQ14160 1630 aa21.66■■□□□ 1.06
NT5DC3-201ENST00000392876 NBR1Q14596 966 aa21.65■■□□□ 1.06
NT5DC3-201ENST00000392876 CCDC136Q96JN2 1154 aa21.6■■□□□ 1.05
NT5DC3-201ENST00000392876 TMC1Q8TDI8 760 aa21.58■■□□□ 1.04
NT5DC3-201ENST00000392876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.57■■□□□ 1.046e-7■■■■□ 22
NT5DC3-201ENST00000392876 HSP90AA1P07900 732 aaKnown RBP21.57■■□□□ 1.04
NT5DC3-201ENST00000392876 MRS2Q9HD23 443 aa21.57■■□□□ 1.04
NT5DC3-201ENST00000392876 KDM2AQ9Y2K7 1162 aa21.55■■□□□ 1.04
NT5DC3-201ENST00000392876 MYO15BQ96JP2 1530 aa21.53■■□□□ 1.04
NT5DC3-201ENST00000392876 ARXQ96QS3 562 aa21.52■■□□□ 1.04
NT5DC3-201ENST00000392876 PLPPR3Q6T4P5 718 aa21.51■■□□□ 1.03
NT5DC3-201ENST00000392876 SENP3-EIF4A1A0A087X0R7 540 aa21.49■■□□□ 1.03
NT5DC3-201ENST00000392876 UPF2Q9HAU5 1272 aaKnown RBP21.48■■□□□ 1.03
NT5DC3-201ENST00000392876 ZCCHC6Q5VYS8 1495 aaKnown RBP21.46■■□□□ 1.03
NT5DC3-201ENST00000392876 STAG3Q9UJ98 1225 aa21.46■■□□□ 1.03
NT5DC3-201ENST00000392876 ANP32BQ92688 251 aaKnown RBP21.43■■□□□ 1.02
NT5DC3-201ENST00000392876 RRP7BPQ9NSQ0 103 aa21.4■■□□□ 1.02
NT5DC3-201ENST00000392876 WDR43Q15061 677 aaKnown RBP eCLIP21.4■■□□□ 1.02
NT5DC3-201ENST00000392876 ESF1Q9H501 851 aaKnown RBP21.39■■□□□ 1.01
NT5DC3-201ENST00000392876 CLIP1P30622 1438 aa21.39■■□□□ 1.01
NT5DC3-201ENST00000392876 SENP3Q9H4L4 574 aaPredicted RBP21.38■■□□□ 1.01
NT5DC3-201ENST00000392876 MTUS2Q5JR59 1369 aa21.37■■□□□ 1.01
NT5DC3-201ENST00000392876 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.36■■□□□ 1.01
NT5DC3-201ENST00000392876 TSPY4P0CV99 314 aa21.31■■□□□ 1
NT5DC3-201ENST00000392876 TSPY10P0CW01 314 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms