Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.975e-9■□□□□ 8.9
LARP4Q71RC2 RICTOR-207ENST00000511516 7312 ntTSL 1 (best)2.59□□□□□ -1.991e-6■□□□□ 8.9
LARP4Q71RC2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.021e-6■□□□□ 8.9
LARP4Q71RC2 C2-217ENST00000497706 1609 ntTSL 513.82□□□□□ -0.29e-15■□□□□ 8.9
LARP4Q71RC2 TRIM47-204ENST00000587339 1907 ntTSL 1 (best)19.41■□□□□ 0.73e-9■□□□□ 8.9
LARP4Q71RC2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.683e-9■□□□□ 8.9
LARP4Q71RC2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.3■□□□□ 0.683e-9■□□□□ 8.9
LARP4Q71RC2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.573e-9■□□□□ 8.9
LARP4Q71RC2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.543e-9■□□□□ 8.9
LARP4Q71RC2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.83■□□□□ 0.453e-9■□□□□ 8.9
LARP4Q71RC2 CTSA-217ENST00000607482 403 ntTSL 317.58■□□□□ 0.43e-9■□□□□ 8.9
LARP4Q71RC2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.293e-9■□□□□ 8.9
LARP4Q71RC2 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.013e-9■□□□□ 8.9
LARP4Q71RC2 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.38□□□□□ -0.113e-9■□□□□ 8.9
LARP4Q71RC2 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.38□□□□□ -0.113e-9■□□□□ 8.9
LARP4Q71RC2 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.24□□□□□ -0.133e-9■□□□□ 8.9
LARP4Q71RC2 CTSA-216ENST00000607212 590 ntTSL 413.49□□□□□ -0.253e-9■□□□□ 8.9
LARP4Q71RC2 CTSA-211ENST00000606066 603 ntTSL 513.28□□□□□ -0.283e-9■□□□□ 8.9
LARP4Q71RC2 CTSA-219ENST00000607841 571 ntTSL 213.28□□□□□ -0.283e-9■□□□□ 8.9
LARP4Q71RC2 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.74□□□□□ -0.373e-9■□□□□ 8.9
LARP4Q71RC2 CTSA-218ENST00000607814 584 ntTSL 412.41□□□□□ -0.423e-9■□□□□ 8.9
LARP4Q71RC2 TRIM47-202ENST00000585333 595 ntTSL 312.32□□□□□ -0.443e-9■□□□□ 8.9
LARP4Q71RC2 CTSA-212ENST00000606394 584 ntTSL 412.13□□□□□ -0.473e-9■□□□□ 8.9
LARP4Q71RC2 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC12.05□□□□□ -0.483e-9■□□□□ 8.9
LARP4Q71RC2 FGFR1-228ENST00000526688 570 ntTSL 312.01□□□□□ -0.493e-9■□□□□ 8.9
LARP4Q71RC2 FGFR1-227ENST00000526570 5528 ntTSL 1 (best)11.54□□□□□ -0.563e-9■□□□□ 8.9
LARP4Q71RC2 FGFR1-209ENST00000397113 3680 ntAPPRIS ALT1 TSL 2 BASIC10.14□□□□□ -0.793e-9■□□□□ 8.9
LARP4Q71RC2 PRDX3-203ENST00000494433 2277 ntTSL 1 (best)8.71□□□□□ -1.023e-9■□□□□ 8.9
LARP4Q71RC2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.393e-11■□□□□ 8.9
LARP4Q71RC2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.92■□□□□ 0.143e-11■□□□□ 8.9
LARP4Q71RC2 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC12.86□□□□□ -0.353e-11■□□□□ 8.9
LARP4Q71RC2 NCLN-208ENST00000592737 2735 ntTSL 317.11■□□□□ 0.331e-7■□□□□ 8.8
LARP4Q71RC2 NCLN-203ENST00000587740 1210 ntTSL 1 (best)14.44□□□□□ -0.11e-7■□□□□ 8.8
LARP4Q71RC2 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.261e-7■□□□□ 8.8
LARP4Q71RC2 NCLN-206ENST00000591062 460 ntTSL 513.37□□□□□ -0.271e-7■□□□□ 8.8
LARP4Q71RC2 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC12.26□□□□□ -0.452e-11■□□□□ 8.8
LARP4Q71RC2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.411e-78■□□□□ 8.8
LARP4Q71RC2 ACTB-207ENST00000462494 2245 ntTSL 516.95■□□□□ 0.31e-78■□□□□ 8.8
LARP4Q71RC2 ACTB-204ENST00000425660 1845 ntTSL 1 (best)14.89□□□□□ -0.031e-78■□□□□ 8.8
LARP4Q71RC2 ACTB-208ENST00000464611 715 ntTSL 58.51□□□□□ -1.051e-78■□□□□ 8.8
LARP4Q71RC2 WNK2-203ENST00000411624 6679 ntTSL 1 (best)14.8□□□□□ -0.041e-6■□□□□ 8.8
LARP4Q71RC2 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC12.01□□□□□ -0.492e-7■□□□□ 8.8
LARP4Q71RC2 WNK2-211ENST00000464625 557 ntTSL 411.1□□□□□ -0.631e-6■□□□□ 8.8
LARP4Q71RC2 HNF1A-AS1-202ENST00000535301 536 ntTSL 4 BASIC7.47□□□□□ -1.212e-7■□□□□ 8.8
LARP4Q71RC2 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.05□□□□□ -1.62e-7■□□□□ 8.8
LARP4Q71RC2 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.97□□□□□ -1.612e-7■□□□□ 8.8
LARP4Q71RC2 GPT2-205ENST00000569193 3205 ntTSL 1 (best)13□□□□□ -0.339e-15■□□□□ 8.8
LARP4Q71RC2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.88■■□□□ 1.417e-8■□□□□ 8.8
LARP4Q71RC2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.167e-8■□□□□ 8.8
LARP4Q71RC2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.167e-8■□□□□ 8.8
LARP4Q71RC2 SLC35A2-216ENST00000635460 706 ntTSL 522.11■■□□□ 1.137e-8■□□□□ 8.8
LARP4Q71RC2 SLC35A2-215ENST00000635285 2046 ntTSL 521.63■■□□□ 1.057e-8■□□□□ 8.8
LARP4Q71RC2 NTHL1-203ENST00000561862 564 ntTSL 221.36■■□□□ 1.017e-8■□□□□ 8.8
LARP4Q71RC2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.26■□□□□ 0.997e-8■□□□□ 8.8
LARP4Q71RC2 IMPA2-210ENST00000590107 1616 ntTSL 520.99■□□□□ 0.957e-8■□□□□ 8.8
LARP4Q71RC2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.97e-8■□□□□ 8.8
LARP4Q71RC2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.55■□□□□ 0.727e-8■□□□□ 8.8
LARP4Q71RC2 SPHK1-208ENST00000591651 541 ntTSL 419.34■□□□□ 0.697e-8■□□□□ 8.8
LARP4Q71RC2 SPHK1-206ENST00000590379 588 ntTSL 319.32■□□□□ 0.687e-8■□□□□ 8.8
LARP4Q71RC2 NTHL1-206ENST00000565406 691 ntTSL 218.47■□□□□ 0.557e-8■□□□□ 8.8
LARP4Q71RC2 SPHK1-205ENST00000588682 858 ntTSL 317.48■□□□□ 0.397e-8■□□□□ 8.8
LARP4Q71RC2 UROD-210ENST00000466193 524 ntTSL 217.35■□□□□ 0.377e-8■□□□□ 8.8
LARP4Q71RC2 SLC35A2-218ENST00000635628 2812 ntTSL 417.26■□□□□ 0.357e-8■□□□□ 8.8
LARP4Q71RC2 SLC35A2-206ENST00000413561 1857 ntTSL 217.13■□□□□ 0.337e-8■□□□□ 8.8
LARP4Q71RC2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.227e-8■□□□□ 8.8
LARP4Q71RC2 NTHL1-207ENST00000566380 814 ntTSL 316.15■□□□□ 0.187e-8■□□□□ 8.8
LARP4Q71RC2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.147e-8■□□□□ 8.8
LARP4Q71RC2 NTHL1-208ENST00000567727 568 ntTSL 215.73■□□□□ 0.117e-8■□□□□ 8.8
LARP4Q71RC2 NTHL1-205ENST00000562951 523 ntTSL 315.39■□□□□ 0.057e-8■□□□□ 8.8
LARP4Q71RC2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.047e-8■□□□□ 8.8
LARP4Q71RC2 NTHL1-209ENST00000568513 837 ntTSL 315.24■□□□□ 0.037e-8■□□□□ 8.8
LARP4Q71RC2 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.017e-8■□□□□ 8.8
LARP4Q71RC2 TBC1D10B-203ENST00000475650 2484 ntTSL 215.12■□□□□ 0.017e-8■□□□□ 8.8
LARP4Q71RC2 IMPA2-209ENST00000589374 919 ntTSL 214.69□□□□□ -0.067e-8■□□□□ 8.8
LARP4Q71RC2 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.137e-8■□□□□ 8.8
LARP4Q71RC2 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.217e-8■□□□□ 8.8
LARP4Q71RC2 UROD-219ENST00000494399 1848 ntTSL 213.71□□□□□ -0.227e-8■□□□□ 8.8
LARP4Q71RC2 NTHL1-202ENST00000561841 1052 ntTSL 513.31□□□□□ -0.287e-8■□□□□ 8.8
LARP4Q71RC2 TBC1D10B-205ENST00000478158 4614 ntTSL 212.28□□□□□ -0.447e-8■□□□□ 8.8
LARP4Q71RC2 UROD-209ENST00000465678 756 ntTSL 212.05□□□□□ -0.487e-8■□□□□ 8.8
LARP4Q71RC2 TXNDC5-205ENST00000475802 582 ntTSL 211.08□□□□□ -0.647e-8■□□□□ 8.8
LARP4Q71RC2 UROD-212ENST00000472254 934 ntTSL 210.54□□□□□ -0.727e-8■□□□□ 8.8
LARP4Q71RC2 UROD-221ENST00000636293 1102 ntTSL 5 BASIC10.46□□□□□ -0.737e-8■□□□□ 8.8
LARP4Q71RC2 UROD-222ENST00000636836 1173 ntTSL 5 BASIC10.46□□□□□ -0.737e-8■□□□□ 8.8
LARP4Q71RC2 SUMO2-202ENST00000420826 3190 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.937e-8■□□□□ 8.8
LARP4Q71RC2 ATP6V1B2-204ENST00000521442 738 ntTSL 37.46□□□□□ -1.227e-8■□□□□ 8.8
LARP4Q71RC2 ATP6V1B2-206ENST00000523482 6907 ntTSL 26.16□□□□□ -1.427e-8■□□□□ 8.8
LARP4Q71RC2 SURF4-204ENST00000465565 400 ntTSL 318.44■□□□□ 0.541e-20■□□□□ 8.8
LARP4Q71RC2 ARID1A-212ENST00000636219 7058 ntAPPRIS ALT2 TSL 510.59□□□□□ -0.712e-7■□□□□ 8.8
LARP4Q71RC2 GPRC5C-211ENST00000582873 393 ntTSL 321.71■■□□□ 1.074e-13■□□□□ 8.8
LARP4Q71RC2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.65■■□□□ 1.387e-7■□□□□ 8.8
LARP4Q71RC2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.95■□□□□ 0.947e-7■□□□□ 8.8
LARP4Q71RC2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.86■□□□□ 0.617e-7■□□□□ 8.8
LARP4Q71RC2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.29■□□□□ 0.527e-7■□□□□ 8.8
LARP4Q71RC2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.137e-7■□□□□ 8.8
LARP4Q71RC2 TSPAN3-209ENST00000560715 2892 ntTSL 26.31□□□□□ -1.47e-7■□□□□ 8.8
LARP4Q71RC2 RPS4X-205ENST00000492695 355 ntTSL 37□□□□□ -1.295e-24■□□□□ 8.8
LARP4Q71RC2 RPS4X-203ENST00000470671 610 ntTSL 33.44□□□□□ -1.865e-24■□□□□ 8.8
LARP4Q71RC2 CTDNEP1-209ENST00000574205 1506 ntTSL 530.91■■■□□ 2.542e-7■□□□□ 8.8
LARP4Q71RC2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.162e-7■□□□□ 8.8
Retrieved 100 of 15,922 protein–RNA pairs in 459.8 ms