RNA–Protein interactions for RNA: ENST00000636219.1

ARID1A-212, Transcript of AT-rich interaction domain 1A, humanhuman

APPRIS ALT2 TSL 5

Gene ARID1A, Length 7,058 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-212ENST00000636219 DCAF8L2P0C7V8 631 aa18.45■□□□□ 0.54
ARID1A-212ENST00000636219 SUPT5HO00267 1087 aaKnown RBP18.09■□□□□ 0.49
ARID1A-212ENST00000636219 PELP1Q8IZL8 1130 aaKnown RBP17.77■□□□□ 0.44
ARID1A-212ENST00000636219 SHROOM4Q9ULL8 1493 aa17.67■□□□□ 0.42
ARID1A-212ENST00000636219 NISCHQ9Y2I1 1504 aa17.63■□□□□ 0.41
ARID1A-212ENST00000636219 EHMT2Q96KQ7 1210 aa17.59■□□□□ 0.41
ARID1A-212ENST00000636219 PCGF6Q9BYE7 350 aa17.48■□□□□ 0.39
ARID1A-212ENST00000636219 CENPBP07199 599 aaPredicted RBP17.26■□□□□ 0.35
ARID1A-212ENST00000636219 MYT1Q01538 1121 aa17.23■□□□□ 0.35
ARID1A-212ENST00000636219 ZEB1P37275 1124 aaPredicted RBP17.14■□□□□ 0.33
ARID1A-212ENST00000636219 ERICH6Q7L0X2 663 aa17.14■□□□□ 0.33
ARID1A-212ENST00000636219 TTBK1Q5TCY1 1321 aaPredicted RBP17.09■□□□□ 0.33
ARID1A-212ENST00000636219 APLP2Q06481 763 aa17.08■□□□□ 0.32
ARID1A-212ENST00000636219 FAM9AQ8IZU1 332 aaPredicted RBP17.08■□□□□ 0.32
ARID1A-212ENST00000636219 CCER1Q8TC90 406 aaPredicted RBP16.98■□□□□ 0.31
ARID1A-212ENST00000636219 YTHDC1Q96MU7 727 aaKnown RBP16.89■□□□□ 0.29
ARID1A-212ENST00000636219 HRCP23327 699 aa16.8■□□□□ 0.28
ARID1A-212ENST00000636219 NEFLP07196 543 aa16.71■□□□□ 0.27
ARID1A-212ENST00000636219 TRIM41Q8WV44 630 aa16.68■□□□□ 0.26
ARID1A-212ENST00000636219 TRIM26Q12899 539 aaPredicted RBP16.62■□□□□ 0.25
ARID1A-212ENST00000636219 RANGAP1P46060 587 aaPredicted RBP16.61■□□□□ 0.25
ARID1A-212ENST00000636219 PPARGC1BQ86YN6 1023 aaKnown RBP16.55■□□□□ 0.24
ARID1A-212ENST00000636219 UBTFP17480 764 aaKnown RBP16.43■□□□□ 0.22
ARID1A-212ENST00000636219 ATP1B4Q9UN42 357 aaPredicted RBP16.36■□□□□ 0.21
ARID1A-212ENST00000636219 LOC105371045A0A1W2PR82 267 aa16.29■□□□□ 0.2
ARID1A-212ENST00000636219 DIEXFQ68CQ4 756 aaKnown RBP16.22■□□□□ 0.19
ARID1A-212ENST00000636219 DAXXQ9UER7 740 aaPredicted RBP16.2■□□□□ 0.18
ARID1A-212ENST00000636219 CHIC1Q5VXU3 224 aa16.17■□□□□ 0.18
ARID1A-212ENST00000636219 GTF3C3Q9Y5Q9 886 aa16.15■□□□□ 0.18
ARID1A-212ENST00000636219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.12■□□□□ 0.17
ARID1A-212ENST00000636219 HNRNPUL2Q1KMD3 747 aaKnown RBP16.08■□□□□ 0.16
ARID1A-212ENST00000636219 ITGAEP38570 1179 aa16.05■□□□□ 0.16
ARID1A-212ENST00000636219 RTL5Q5HYW3 569 aaPredicted RBP16.05■□□□□ 0.16
ARID1A-212ENST00000636219 POLR3GLQ9BT43 218 aa15.98■□□□□ 0.15
ARID1A-212ENST00000636219 BCANQ96GW7 911 aa15.94■□□□□ 0.14
ARID1A-212ENST00000636219 CNGB1Q14028 1251 aaPredicted RBP15.92■□□□□ 0.14
ARID1A-212ENST00000636219 ACIN1Q9UKV3 1341 aaKnown RBP15.89■□□□□ 0.14
ARID1A-212ENST00000636219 ZNF316A6NFI3 1004 aaPredicted RBP15.87■□□□□ 0.13
ARID1A-212ENST00000636219 CDK11AQ9UQ88 783 aaPredicted RBP15.77■□□□□ 0.11
ARID1A-212ENST00000636219 CLSPNQ9HAW4 1339 aa15.73■□□□□ 0.11
ARID1A-212ENST00000636219 NEUROD1Q13562 356 aa15.63■□□□□ 0.09
ARID1A-212ENST00000636219 ANP32CO43423 234 aa15.63■□□□□ 0.09
ARID1A-212ENST00000636219 SCAF1Q9H7N4 1312 aaKnown RBP15.57■□□□□ 0.08
ARID1A-212ENST00000636219 FAM50AQ14320 339 aaKnown RBP15.57■□□□□ 0.08
ARID1A-212ENST00000636219 ANP32AP39687 249 aaKnown RBP15.49■□□□□ 0.07
ARID1A-212ENST00000636219 SLC4A1APQ9BWU0 796 aaKnown RBP15.48■□□□□ 0.07
ARID1A-212ENST00000636219 EIF5BO60841 1220 aaKnown RBP15.47■□□□□ 0.07
ARID1A-212ENST00000636219 MYT1LQ9UL68 1186 aa15.47■□□□□ 0.07
ARID1A-212ENST00000636219 FKBP8Q14318 412 aa15.47■□□□□ 0.07
ARID1A-212ENST00000636219 TRIM52Q96A61 297 aa15.45■□□□□ 0.06
ARID1A-212ENST00000636219 NPM2Q86SE8 214 aaKnown RBP15.42■□□□□ 0.06
ARID1A-212ENST00000636219 DCAF1Q9Y4B6 1507 aa15.37■□□□□ 0.05
ARID1A-212ENST00000636219 ZNF326Q5BKZ1 582 aaKnown RBP15.32■□□□□ 0.04
ARID1A-212ENST00000636219 NBR1Q14596 966 aa15.31■□□□□ 0.04
ARID1A-212ENST00000636219 CANXP27824 592 aaKnown RBP15.26■□□□□ 0.03
ARID1A-212ENST00000636219 GLIPR1L2Q4G1C9 344 aa15.24■□□□□ 0.03
ARID1A-212ENST00000636219 ZBTB47Q9UFB7 747 aaPredicted RBP15.21■□□□□ 0.03
ARID1A-212ENST00000636219 HNRNPUQ00839 825 aaKnown RBP eCLIP15.21■□□□□ 0.03
ARID1A-212ENST00000636219 MIER1Q8N108 512 aa15.2■□□□□ 0.02
ARID1A-212ENST00000636219 BCL11AQ9H165 835 aa15.19■□□□□ 0.02
ARID1A-212ENST00000636219 DDX10Q13206 875 aaKnown RBP15.18■□□□□ 0.02
ARID1A-212ENST00000636219 ANP32EQ9BTT0 268 aa15.16■□□□□ 0.02
ARID1A-212ENST00000636219 ANP32BQ92688 251 aaKnown RBP15.13■□□□□ 0.01
ARID1A-212ENST00000636219 FAM9BQ8IZU0 186 aa15.12■□□□□ 0.01
ARID1A-212ENST00000636219 CCDC136Q96JN2 1154 aa15.09■□□□□ 0.01
ARID1A-212ENST00000636219 IRX6P78412 446 aaPredicted RBP15.09■□□□□ 0.01
ARID1A-212ENST00000636219 CSRNP3Q8WYN3 585 aa15.08■□□□□ 0
ARID1A-212ENST00000636219 ARXQ96QS3 562 aa15.05■□□□□ 0
ARID1A-212ENST00000636219 TONSLQ96HA7 1378 aa15.04■□□□□ -0
ARID1A-212ENST00000636219 HSP90AA1P07900 732 aaKnown RBP15.03■□□□□ -0
ARID1A-212ENST00000636219 UPF2Q9HAU5 1272 aaKnown RBP15.02□□□□□ -0.01
ARID1A-212ENST00000636219 MYO15BQ96JP2 1530 aa15.02□□□□□ -0.01
ARID1A-212ENST00000636219 P3H3Q8IVL6 736 aa15.01□□□□□ -0.01
ARID1A-212ENST00000636219 SALL2Q9Y467 1007 aaPredicted RBP15□□□□□ -0.01
ARID1A-212ENST00000636219 CCDC180Q9P1Z9 1646 aa14.98□□□□□ -0.01
ARID1A-212ENST00000636219 NEFMP07197 916 aa14.93□□□□□ -0.02
ARID1A-212ENST00000636219 SLC24A1O60721 1099 aa14.92□□□□□ -0.02
ARID1A-212ENST00000636219 MRS2Q9HD23 443 aa14.91□□□□□ -0.02
ARID1A-212ENST00000636219 HIRIP3Q9BW71 556 aaPredicted RBP14.9□□□□□ -0.02
ARID1A-212ENST00000636219 TMC1Q8TDI8 760 aa14.9□□□□□ -0.02
ARID1A-212ENST00000636219 PABPN1Q86U42 306 aaKnown RBP eCLIP14.9□□□□□ -0.02
ARID1A-212ENST00000636219 ARID3CA6NKF2 412 aa14.89□□□□□ -0.03
ARID1A-212ENST00000636219 RTN4Q9NQC3 1192 aaKnown RBP14.87□□□□□ -0.03
ARID1A-212ENST00000636219 SUPT16HQ9Y5B9 1047 aaKnown RBP14.86□□□□□ -0.03
ARID1A-212ENST00000636219 DDRGK1Q96HY6 314 aa14.85□□□□□ -0.03
ARID1A-212ENST00000636219 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.84□□□□□ -0.03
ARID1A-212ENST00000636219 ZNF777Q9ULD5 760 aaPredicted RBP14.82□□□□□ -0.04
ARID1A-212ENST00000636219 ABCC9O60706 1549 aa14.78□□□□□ -0.04
ARID1A-212ENST00000636219 TRIM44Q96DX7 344 aaPredicted RBP14.78□□□□□ -0.04
ARID1A-212ENST00000636219 NOP58Q9Y2X3 529 aaKnown RBP14.77□□□□□ -0.05
ARID1A-212ENST00000636219 BECN1Q14457 450 aa14.75□□□□□ -0.05
ARID1A-212ENST00000636219 LAS1LQ9Y4W2 734 aaKnown RBP14.75□□□□□ -0.05
ARID1A-212ENST00000636219 WDR43Q15061 677 aaKnown RBP eCLIP14.75□□□□□ -0.05
ARID1A-212ENST00000636219 PPM1GO15355 546 aaPredicted RBP14.73□□□□□ -0.05
ARID1A-212ENST00000636219 DEKP35659 375 aaKnown RBP14.72□□□□□ -0.05
ARID1A-212ENST00000636219 CHIC2Q9UKJ5 165 aa14.72□□□□□ -0.05
ARID1A-212ENST00000636219 ERICH6BQ5W0A0 696 aa14.71□□□□□ -0.05
ARID1A-212ENST00000636219 NAP1L5Q96NT1 182 aaPredicted RBP14.71□□□□□ -0.05
ARID1A-212ENST00000636219 FBLN2P98095 1184 aa14.71□□□□□ -0.06
ARID1A-212ENST00000636219 PPP4R2Q9NY27 417 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms