RNA–Protein interactions for RNA: ENST00000447712.6

FGFR1-214, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGFR1, Length 5,900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-214ENST00000447712 DCAF8L2P0C7V8 631 aa35.75■■■■□ 3.31
FGFR1-214ENST00000447712 SUPT5HO00267 1087 aaKnown RBP33.25■■■□□ 2.91
FGFR1-214ENST00000447712 EHMT2Q96KQ7 1210 aa32.88■■■□□ 2.85
FGFR1-214ENST00000447712 SHROOM4Q9ULL8 1493 aa32.6■■■□□ 2.81
FGFR1-214ENST00000447712 APLP2Q06481 763 aa32.02■■■□□ 2.72
FGFR1-214ENST00000447712 NISCHQ9Y2I1 1504 aa31.9■■■□□ 2.7
FGFR1-214ENST00000447712 FAM9AQ8IZU1 332 aaPredicted RBP31.85■■■□□ 2.69
FGFR1-214ENST00000447712 TTBK1Q5TCY1 1321 aaPredicted RBP31.67■■■□□ 2.66
FGFR1-214ENST00000447712 PELP1Q8IZL8 1130 aaKnown RBP31.66■■■□□ 2.66
FGFR1-214ENST00000447712 RANGAP1P46060 587 aaPredicted RBP31.5■■■□□ 2.63
FGFR1-214ENST00000447712 ATP1B4Q9UN42 357 aaPredicted RBP31.3■■■□□ 2.6
FGFR1-214ENST00000447712 PCGF6Q9BYE7 350 aa30.93■■■□□ 2.54
FGFR1-214ENST00000447712 TRIM41Q8WV44 630 aa30.65■■■□□ 2.5
FGFR1-214ENST00000447712 UBTFP17480 764 aaKnown RBP30.62■■■□□ 2.49
FGFR1-214ENST00000447712 ERICH6Q7L0X2 663 aa30.6■■■□□ 2.49
FGFR1-214ENST00000447712 CCER1Q8TC90 406 aaPredicted RBP30.5■■■□□ 2.47
FGFR1-214ENST00000447712 MYT1LQ9UL68 1186 aa30.44■■■□□ 2.46
FGFR1-214ENST00000447712 CENPBP07199 599 aaPredicted RBP30.22■■■□□ 2.43
FGFR1-214ENST00000447712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.19■■■□□ 2.42
FGFR1-214ENST00000447712 HNRNPUL2Q1KMD3 747 aaKnown RBP30.19■■■□□ 2.42
FGFR1-214ENST00000447712 PPARGC1BQ86YN6 1023 aaKnown RBP30.07■■■□□ 2.4
FGFR1-214ENST00000447712 YTHDC1Q96MU7 727 aaKnown RBP30.03■■■□□ 2.4
FGFR1-214ENST00000447712 CHIC1Q5VXU3 224 aa30.03■■■□□ 2.4
FGFR1-214ENST00000447712 NEFLP07196 543 aa30.02■■■□□ 2.4
FGFR1-214ENST00000447712 ZEB1P37275 1124 aaPredicted RBP30■■■□□ 2.39
FGFR1-214ENST00000447712 POLR3GLQ9BT43 218 aa29.97■■■□□ 2.39
FGFR1-214ENST00000447712 ITGAEP38570 1179 aa29.89■■■□□ 2.38
FGFR1-214ENST00000447712 CNGB1Q14028 1251 aaPredicted RBP29.72■■■□□ 2.35
FGFR1-214ENST00000447712 SLC4A1APQ9BWU0 796 aaKnown RBP29.64■■■□□ 2.34
FGFR1-214ENST00000447712 DAXXQ9UER7 740 aaPredicted RBP29.44■■■□□ 2.3
FGFR1-214ENST00000447712 TRIM26Q12899 539 aaPredicted RBP29.1■■■□□ 2.25
FGFR1-214ENST00000447712 MYT1Q01538 1121 aa29.09■■■□□ 2.25
FGFR1-214ENST00000447712 LOC105371045A0A1W2PR82 267 aa28.99■■■□□ 2.23
FGFR1-214ENST00000447712 PABPN1Q86U42 306 aaKnown RBP eCLIP28.98■■■□□ 2.234e-6■□□□□ 9.3
FGFR1-214ENST00000447712 FAM50AQ14320 339 aaKnown RBP28.97■■■□□ 2.23
FGFR1-214ENST00000447712 FBLN2P98095 1184 aa28.95■■■□□ 2.22
FGFR1-214ENST00000447712 TRIM52Q96A61 297 aa28.94■■■□□ 2.22
FGFR1-214ENST00000447712 CLSPNQ9HAW4 1339 aa28.93■■■□□ 2.22
FGFR1-214ENST00000447712 SLC24A1O60721 1099 aa28.77■■■□□ 2.2
FGFR1-214ENST00000447712 BCANQ96GW7 911 aa28.76■■■□□ 2.19
FGFR1-214ENST00000447712 ZNF326Q5BKZ1 582 aaKnown RBP28.73■■■□□ 2.19
FGFR1-214ENST00000447712 HRCP23327 699 aa28.72■■■□□ 2.19
FGFR1-214ENST00000447712 ZNF316A6NFI3 1004 aaPredicted RBP28.71■■■□□ 2.19
FGFR1-214ENST00000447712 NEUROD1Q13562 356 aa28.68■■■□□ 2.18
FGFR1-214ENST00000447712 ABCC9O60706 1549 aa28.65■■■□□ 2.18
FGFR1-214ENST00000447712 BCL11AQ9H165 835 aa28.59■■■□□ 2.17
FGFR1-214ENST00000447712 ARID3CA6NKF2 412 aa28.53■■■□□ 2.16
FGFR1-214ENST00000447712 ZBTB47Q9UFB7 747 aaPredicted RBP28.48■■■□□ 2.15
FGFR1-214ENST00000447712 PLPPR3Q6T4P5 718 aa28.44■■■□□ 2.14
FGFR1-214ENST00000447712 RTL5Q5HYW3 569 aaPredicted RBP28.36■■■□□ 2.13
FGFR1-214ENST00000447712 P3H3Q8IVL6 736 aa28.31■■■□□ 2.12
FGFR1-214ENST00000447712 ESF1Q9H501 851 aaKnown RBP28.27■■■□□ 2.12
FGFR1-214ENST00000447712 ZNF777Q9ULD5 760 aaPredicted RBP28.26■■■□□ 2.11
FGFR1-214ENST00000447712 CANXP27824 592 aaKnown RBP28.26■■■□□ 2.11
FGFR1-214ENST00000447712 DIEXFQ68CQ4 756 aaKnown RBP28.26■■■□□ 2.11
FGFR1-214ENST00000447712 NEFMP07197 916 aa28.25■■■□□ 2.11
FGFR1-214ENST00000447712 ANP32CO43423 234 aa28.13■■■□□ 2.09
FGFR1-214ENST00000447712 STAG3Q9UJ98 1225 aa28.09■■■□□ 2.09
FGFR1-214ENST00000447712 CHGAP10645 457 aaKnown RBP28.06■■■□□ 2.08
FGFR1-214ENST00000447712 NPM1P06748 294 aaKnown RBP eCLIP27.92■■■□□ 2.06
FGFR1-214ENST00000447712 CDK11AQ9UQ88 783 aaPredicted RBP27.84■■■□□ 2.05
FGFR1-214ENST00000447712 SCAF1Q9H7N4 1312 aaKnown RBP27.77■■■□□ 2.04
FGFR1-214ENST00000447712 A0A0G2JS52 829 aa27.7■■■□□ 2.03
FGFR1-214ENST00000447712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.65■■■□□ 2.026e-7■■□□□ 13.1
FGFR1-214ENST00000447712 PLEKHG5O94827 1062 aa27.6■■■□□ 2.01
FGFR1-214ENST00000447712 CSRNP3Q8WYN3 585 aa27.58■■■□□ 2.01
FGFR1-214ENST00000447712 NPM2Q86SE8 214 aaKnown RBP27.57■■■□□ 2
FGFR1-214ENST00000447712 SENP3Q9H4L4 574 aaPredicted RBP27.56■■■□□ 2
FGFR1-214ENST00000447712 GTF3C3Q9Y5Q9 886 aa27.52■■■□□ 2
FGFR1-214ENST00000447712 ZBTB7CA1YPR0 619 aa27.5■■□□□ 1.99
FGFR1-214ENST00000447712 SALL2Q9Y467 1007 aaPredicted RBP27.48■■□□□ 1.99
FGFR1-214ENST00000447712 CHIC2Q9UKJ5 165 aa27.46■■□□□ 1.99
FGFR1-214ENST00000447712 HSP90AA1P07900 732 aaKnown RBP27.44■■□□□ 1.98
FGFR1-214ENST00000447712 ANP32AP39687 249 aaKnown RBP27.38■■□□□ 1.97
FGFR1-214ENST00000447712 TONSLQ96HA7 1378 aa27.38■■□□□ 1.97
FGFR1-214ENST00000447712 C14orf37Q86TY3 774 aa27.37■■□□□ 1.97
FGFR1-214ENST00000447712 KDM2AQ9Y2K7 1162 aa27.33■■□□□ 1.97
FGFR1-214ENST00000447712 FAM9BQ8IZU0 186 aa27.32■■□□□ 1.96
FGFR1-214ENST00000447712 CHMP7Q8WUX9 453 aaPredicted RBP27.31■■□□□ 1.96
FGFR1-214ENST00000447712 TSPY4P0CV99 314 aa27.25■■□□□ 1.95
FGFR1-214ENST00000447712 TSPY10P0CW01 314 aa27.25■■□□□ 1.95
FGFR1-214ENST00000447712 PPP1R15AO75807 674 aaPredicted RBP27.23■■□□□ 1.95
FGFR1-214ENST00000447712 SCRIBQ14160 1630 aa27.23■■□□□ 1.95
FGFR1-214ENST00000447712 KCNH8Q96L42 1107 aa27.21■■□□□ 1.95
FGFR1-214ENST00000447712 UPF2Q9HAU5 1272 aaKnown RBP27.21■■□□□ 1.95
FGFR1-214ENST00000447712 ANP32BQ92688 251 aaKnown RBP27.2■■□□□ 1.95
FGFR1-214ENST00000447712 HNRNPUQ00839 825 aaKnown RBP eCLIP27.19■■□□□ 1.944e-7■■□□□ 13.9
FGFR1-214ENST00000447712 HAP1P54257 671 aaPredicted RBP27.18■■□□□ 1.94
FGFR1-214ENST00000447712 ARID4BQ4LE39 1312 aaPredicted RBP27.18■■□□□ 1.94
FGFR1-214ENST00000447712 WDR43Q15061 677 aaKnown RBP eCLIP27.18■■□□□ 1.94
FGFR1-214ENST00000447712 DDX10Q13206 875 aaKnown RBP27.14■■□□□ 1.94
FGFR1-214ENST00000447712 TMC1Q8TDI8 760 aa27.14■■□□□ 1.93
FGFR1-214ENST00000447712 FKBP8Q14318 412 aa27.09■■□□□ 1.93
FGFR1-214ENST00000447712 ARXQ96QS3 562 aa27.07■■□□□ 1.92
FGFR1-214ENST00000447712 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.04■■□□□ 1.92
FGFR1-214ENST00000447712 MTUS2Q5JR59 1369 aa26.98■■□□□ 1.91
FGFR1-214ENST00000447712 MYH16Q9H6N6 1097 aa26.96■■□□□ 1.91
FGFR1-214ENST00000447712 CDK11BP21127 795 aaKnown RBP26.92■■□□□ 1.9
FGFR1-214ENST00000447712 RRP7BPQ9NSQ0 103 aa26.9■■□□□ 1.9
FGFR1-214ENST00000447712 CCDC136Q96JN2 1154 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms