RNA–Protein interactions for RNA: ENST00000569193.1

GPT2-205, Transcript of glutamic--pyruvic transaminase 2, humanhuman

TSL 1 (best)

Gene GPT2, Length 3,205 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPT2-205ENST00000569193 NISCHQ9Y2I1 1504 aa26.95■■□□□ 1.9
GPT2-205ENST00000569193 SHROOM4Q9ULL8 1493 aa23.38■■□□□ 1.33
GPT2-205ENST00000569193 DCAF8L2P0C7V8 631 aa23.2■■□□□ 1.3
GPT2-205ENST00000569193 SUPT5HO00267 1087 aaKnown RBP22.98■■□□□ 1.27
GPT2-205ENST00000569193 CCDC180Q9P1Z9 1646 aa22.8■■□□□ 1.24
GPT2-205ENST00000569193 ZCCHC6Q5VYS8 1495 aaKnown RBP22.8■■□□□ 1.24
GPT2-205ENST00000569193 MYO15BQ96JP2 1530 aa22.04■■□□□ 1.12
GPT2-205ENST00000569193 DCAF1Q9Y4B6 1507 aa22.03■■□□□ 1.12
GPT2-205ENST00000569193 CHIC1Q5VXU3 224 aa22.02■■□□□ 1.12
GPT2-205ENST00000569193 EHMT2Q96KQ7 1210 aa21.94■■□□□ 1.1
GPT2-205ENST00000569193 LOC105371045A0A1W2PR82 267 aa21.58■■□□□ 1.04
GPT2-205ENST00000569193 PCGF6Q9BYE7 350 aa21.54■■□□□ 1.04
GPT2-205ENST00000569193 FAM9AQ8IZU1 332 aaPredicted RBP21.51■■□□□ 1.03
GPT2-205ENST00000569193 ABCC9O60706 1549 aa21.51■■□□□ 1.03
GPT2-205ENST00000569193 SCRIBQ14160 1630 aa21.5■■□□□ 1.03
GPT2-205ENST00000569193 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
GPT2-205ENST00000569193 HRCP23327 699 aa21.36■■□□□ 1.01
GPT2-205ENST00000569193 PPARGC1BQ86YN6 1023 aaKnown RBP21.26■□□□□ 0.99
GPT2-205ENST00000569193 RB1CC1Q8TDY2 1594 aa21.18■□□□□ 0.98
GPT2-205ENST00000569193 CECR2Q9BXF3 1484 aa21.11■□□□□ 0.97
GPT2-205ENST00000569193 NACADO15069 1562 aa21.08■□□□□ 0.96
GPT2-205ENST00000569193 TTBK1Q5TCY1 1321 aaPredicted RBP21.08■□□□□ 0.96
GPT2-205ENST00000569193 MROH2BQ7Z745 1585 aa21.01■□□□□ 0.95
GPT2-205ENST00000569193 TRIM41Q8WV44 630 aa21■□□□□ 0.95
GPT2-205ENST00000569193 WIZO95785 1651 aa20.91■□□□□ 0.94
GPT2-205ENST00000569193 TRIM26Q12899 539 aaPredicted RBP20.87■□□□□ 0.93
GPT2-205ENST00000569193 BAZ1AQ9NRL2 1556 aaPredicted RBP20.69■□□□□ 0.9
GPT2-205ENST00000569193 EIF4G1Q04637 1599 aaKnown RBP20.64■□□□□ 0.89
GPT2-205ENST00000569193 PABPN1Q86U42 306 aaKnown RBP eCLIP20.61■□□□□ 0.89
GPT2-205ENST00000569193 RANGAP1P46060 587 aaPredicted RBP20.61■□□□□ 0.89
GPT2-205ENST00000569193 UNC13AQ9UPW8 1703 aa20.57■□□□□ 0.88
GPT2-205ENST00000569193 SMARCA4P51532 1647 aa20.51■□□□□ 0.87
GPT2-205ENST00000569193 TOP2AP11388 1531 aaKnown RBP20.49■□□□□ 0.87
GPT2-205ENST00000569193 CCDC88BA6NC98 1476 aa20.47■□□□□ 0.87
GPT2-205ENST00000569193 ABCC8Q09428 1581 aa20.47■□□□□ 0.87
GPT2-205ENST00000569193 SMARCA2P51531 1590 aa20.43■□□□□ 0.86
GPT2-205ENST00000569193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.31■□□□□ 0.84
GPT2-205ENST00000569193 BICRAQ9NZM4 1560 aa20.31■□□□□ 0.84
GPT2-205ENST00000569193 ZEB1P37275 1124 aaPredicted RBP20.3■□□□□ 0.84
GPT2-205ENST00000569193 SOGA1O94964 1423 aa20.29■□□□□ 0.84
GPT2-205ENST00000569193 PELP1Q8IZL8 1130 aaKnown RBP20.25■□□□□ 0.83
GPT2-205ENST00000569193 RUSC2Q8N2Y8 1516 aa20.23■□□□□ 0.83
GPT2-205ENST00000569193 UBTFP17480 764 aaKnown RBP20.19■□□□□ 0.82
GPT2-205ENST00000569193 CEP162Q5TB80 1403 aa20.13■□□□□ 0.81
GPT2-205ENST00000569193 CCER1Q8TC90 406 aaPredicted RBP20.11■□□□□ 0.81
GPT2-205ENST00000569193 PEG3Q9GZU2 1588 aa20.09■□□□□ 0.81
GPT2-205ENST00000569193 WRNQ14191 1432 aaPredicted RBP eCLIP20.09■□□□□ 0.81
GPT2-205ENST00000569193 CSRNP3Q8WYN3 585 aa20.08■□□□□ 0.81
GPT2-205ENST00000569193 TNIKQ9UKE5 1360 aa20.06■□□□□ 0.8
GPT2-205ENST00000569193 SYNJ1O43426 1573 aa20■□□□□ 0.79
GPT2-205ENST00000569193 EEA1Q15075 1411 aa19.99■□□□□ 0.79
GPT2-205ENST00000569193 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
GPT2-205ENST00000569193 HNRNPUL2Q1KMD3 747 aaKnown RBP19.93■□□□□ 0.78
GPT2-205ENST00000569193 GOLGA3Q08378 1498 aa19.92■□□□□ 0.78
GPT2-205ENST00000569193 BAZ1BQ9UIG0 1483 aaKnown RBP19.89■□□□□ 0.78
GPT2-205ENST00000569193 CEP164Q9UPV0 1460 aa19.8■□□□□ 0.76
GPT2-205ENST00000569193 KIF21BO75037 1637 aa19.79■□□□□ 0.76
GPT2-205ENST00000569193 YTHDC1Q96MU7 727 aaKnown RBP19.78■□□□□ 0.76
GPT2-205ENST00000569193 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
GPT2-205ENST00000569193 RAPGEF2Q9Y4G8 1499 aa19.76■□□□□ 0.75
GPT2-205ENST00000569193 CLIP1P30622 1438 aa19.73■□□□□ 0.75
GPT2-205ENST00000569193 MYT1Q01538 1121 aa19.7■□□□□ 0.74
GPT2-205ENST00000569193 ITGAEP38570 1179 aa19.69■□□□□ 0.74
GPT2-205ENST00000569193 TOP2BQ02880 1626 aa19.68■□□□□ 0.74
GPT2-205ENST00000569193 VPS8Q8N3P4 1428 aa19.64■□□□□ 0.74
GPT2-205ENST00000569193 DIEXFQ68CQ4 756 aaKnown RBP19.62■□□□□ 0.73
GPT2-205ENST00000569193 BIVM-ERCC5R4GMW8 1640 aa19.6■□□□□ 0.73
GPT2-205ENST00000569193 ATP1B4Q9UN42 357 aaPredicted RBP19.6■□□□□ 0.73
GPT2-205ENST00000569193 APLP2Q06481 763 aa19.59■□□□□ 0.73
GPT2-205ENST00000569193 NCAPD3P42695 1498 aa19.56■□□□□ 0.72
GPT2-205ENST00000569193 CUX1P39880 1505 aa19.54■□□□□ 0.72
GPT2-205ENST00000569193 NEUROD1Q13562 356 aa19.54■□□□□ 0.72
GPT2-205ENST00000569193 HMGXB3Q12766 1538 aa19.52■□□□□ 0.72
GPT2-205ENST00000569193 PRXQ9BXM0 1461 aa19.52■□□□□ 0.72
GPT2-205ENST00000569193 ACIN1Q9UKV3 1341 aaKnown RBP19.48■□□□□ 0.71
GPT2-205ENST00000569193 ARAP1Q96P48 1450 aa19.47■□□□□ 0.71
GPT2-205ENST00000569193 ZNF316A6NFI3 1004 aaPredicted RBP19.46■□□□□ 0.7
GPT2-205ENST00000569193 ERICH3Q5RHP9 1530 aa19.45■□□□□ 0.7
GPT2-205ENST00000569193 P3H3Q8IVL6 736 aa19.44■□□□□ 0.7
GPT2-205ENST00000569193 CFTRP13569 1480 aa19.43■□□□□ 0.7
GPT2-205ENST00000569193 KANK4Q5T7N3 995 aaPredicted RBP19.42■□□□□ 0.7
GPT2-205ENST00000569193 KIF27Q86VH2 1401 aa19.36■□□□□ 0.69
GPT2-205ENST00000569193 GTF3C3Q9Y5Q9 886 aa19.29■□□□□ 0.68
GPT2-205ENST00000569193 ARHGAP35Q9NRY4 1499 aa19.29■□□□□ 0.68
GPT2-205ENST00000569193 MIER1Q8N108 512 aa19.28■□□□□ 0.68
GPT2-205ENST00000569193 DHX57Q6P158 1386 aaKnown RBP19.25■□□□□ 0.67
GPT2-205ENST00000569193 IGF1RP08069 1367 aa19.24■□□□□ 0.67
GPT2-205ENST00000569193 CENPBP07199 599 aaPredicted RBP19.23■□□□□ 0.67
GPT2-205ENST00000569193 CUX2O14529 1486 aa19.22■□□□□ 0.67
GPT2-205ENST00000569193 PRDM2Q13029 1718 aa19.22■□□□□ 0.67
GPT2-205ENST00000569193 RRBP1Q9P2E9 1410 aaKnown RBP19.2■□□□□ 0.66
GPT2-205ENST00000569193 CADPSQ9ULU8 1353 aa19.2■□□□□ 0.66
GPT2-205ENST00000569193 ARID3CA6NKF2 412 aa19.18■□□□□ 0.66
GPT2-205ENST00000569193 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
GPT2-205ENST00000569193 HIRIP3Q9BW71 556 aaPredicted RBP19.12■□□□□ 0.65
GPT2-205ENST00000569193 CARMIL1Q5VZK9 1371 aa19.11■□□□□ 0.65
GPT2-205ENST00000569193 CCNB3Q8WWL7 1395 aa19.11■□□□□ 0.65
GPT2-205ENST00000569193 CLSPNQ9HAW4 1339 aa19.09■□□□□ 0.65
GPT2-205ENST00000569193 FAM50AQ14320 339 aaKnown RBP19.08■□□□□ 0.65
GPT2-205ENST00000569193 CC2D2AQ9P2K1 1620 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms