RNA–Protein interactions for RNA: ENST00000397091.9

FGFR1-206, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 5,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-206ENST00000397091 DCAF8L2P0C7V8 631 aa31.44■■■□□ 2.62
FGFR1-206ENST00000397091 SUPT5HO00267 1087 aaKnown RBP29.05■■■□□ 2.24
FGFR1-206ENST00000397091 NISCHQ9Y2I1 1504 aa28.95■■■□□ 2.22
FGFR1-206ENST00000397091 SHROOM4Q9ULL8 1493 aa28.6■■■□□ 2.17
FGFR1-206ENST00000397091 EHMT2Q96KQ7 1210 aa28.38■■■□□ 2.13
FGFR1-206ENST00000397091 FAM9AQ8IZU1 332 aaPredicted RBP28.16■■■□□ 2.1
FGFR1-206ENST00000397091 APLP2Q06481 763 aa28.01■■■□□ 2.08
FGFR1-206ENST00000397091 PELP1Q8IZL8 1130 aaKnown RBP27.91■■■□□ 2.06
FGFR1-206ENST00000397091 MYT1Q01538 1121 aa27.41■■□□□ 1.98
FGFR1-206ENST00000397091 RANGAP1P46060 587 aaPredicted RBP27.37■■□□□ 1.97
FGFR1-206ENST00000397091 TTBK1Q5TCY1 1321 aaPredicted RBP27.31■■□□□ 1.96
FGFR1-206ENST00000397091 ATP1B4Q9UN42 357 aaPredicted RBP27.31■■□□□ 1.96
FGFR1-206ENST00000397091 PCGF6Q9BYE7 350 aa27.16■■□□□ 1.94
FGFR1-206ENST00000397091 CENPBP07199 599 aaPredicted RBP27.05■■□□□ 1.92
FGFR1-206ENST00000397091 TRIM41Q8WV44 630 aa26.93■■□□□ 1.9
FGFR1-206ENST00000397091 ZEB1P37275 1124 aaPredicted RBP26.84■■□□□ 1.89
FGFR1-206ENST00000397091 UBTFP17480 764 aaKnown RBP26.84■■□□□ 1.89
FGFR1-206ENST00000397091 ERICH6Q7L0X2 663 aa26.79■■□□□ 1.88
FGFR1-206ENST00000397091 MYT1LQ9UL68 1186 aa26.66■■□□□ 1.86
FGFR1-206ENST00000397091 CCER1Q8TC90 406 aaPredicted RBP26.57■■□□□ 1.84
FGFR1-206ENST00000397091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.5■■□□□ 1.83
FGFR1-206ENST00000397091 HNRNPUL2Q1KMD3 747 aaKnown RBP26.5■■□□□ 1.83
FGFR1-206ENST00000397091 HRCP23327 699 aa26.3■■□□□ 1.8
FGFR1-206ENST00000397091 YTHDC1Q96MU7 727 aaKnown RBP26.21■■□□□ 1.79
FGFR1-206ENST00000397091 NEFLP07196 543 aa26.09■■□□□ 1.77
FGFR1-206ENST00000397091 CHIC1Q5VXU3 224 aa26.08■■□□□ 1.77
FGFR1-206ENST00000397091 ITGAEP38570 1179 aa25.98■■□□□ 1.75
FGFR1-206ENST00000397091 PPARGC1BQ86YN6 1023 aaKnown RBP25.97■■□□□ 1.75
FGFR1-206ENST00000397091 POLR3GLQ9BT43 218 aa25.9■■□□□ 1.74
FGFR1-206ENST00000397091 PABPN1Q86U42 306 aaKnown RBP eCLIP25.89■■□□□ 1.744e-6■□□□□ 9.3
FGFR1-206ENST00000397091 ABCC9O60706 1549 aa25.89■■□□□ 1.73
FGFR1-206ENST00000397091 TRIM26Q12899 539 aaPredicted RBP25.88■■□□□ 1.73
FGFR1-206ENST00000397091 SLC4A1APQ9BWU0 796 aaKnown RBP25.72■■□□□ 1.71
FGFR1-206ENST00000397091 FBLN2P98095 1184 aa25.62■■□□□ 1.69
FGFR1-206ENST00000397091 CNGB1Q14028 1251 aaPredicted RBP25.53■■□□□ 1.68
FGFR1-206ENST00000397091 FAM50AQ14320 339 aaKnown RBP25.35■■□□□ 1.65
FGFR1-206ENST00000397091 TRIM52Q96A61 297 aa25.3■■□□□ 1.64
FGFR1-206ENST00000397091 DIEXFQ68CQ4 756 aaKnown RBP25.26■■□□□ 1.63
FGFR1-206ENST00000397091 DAXXQ9UER7 740 aaPredicted RBP25.26■■□□□ 1.63
FGFR1-206ENST00000397091 LOC105371045A0A1W2PR82 267 aa25.24■■□□□ 1.63
FGFR1-206ENST00000397091 GTF3C3Q9Y5Q9 886 aa25.23■■□□□ 1.63
FGFR1-206ENST00000397091 BCANQ96GW7 911 aa25.19■■□□□ 1.62
FGFR1-206ENST00000397091 RTL5Q5HYW3 569 aaPredicted RBP25.15■■□□□ 1.62
FGFR1-206ENST00000397091 ESF1Q9H501 851 aaKnown RBP25.01■■□□□ 1.59
FGFR1-206ENST00000397091 ZNF326Q5BKZ1 582 aaKnown RBP25■■□□□ 1.59
FGFR1-206ENST00000397091 ARID3CA6NKF2 412 aa25■■□□□ 1.59
FGFR1-206ENST00000397091 SLC24A1O60721 1099 aa24.91■■□□□ 1.58
FGFR1-206ENST00000397091 NEUROD1Q13562 356 aa24.91■■□□□ 1.58
FGFR1-206ENST00000397091 ACIN1Q9UKV3 1341 aaKnown RBP24.9■■□□□ 1.58
FGFR1-206ENST00000397091 CLSPNQ9HAW4 1339 aa24.9■■□□□ 1.58
FGFR1-206ENST00000397091 NPM1P06748 294 aaKnown RBP eCLIP24.88■■□□□ 1.57
FGFR1-206ENST00000397091 P3H3Q8IVL6 736 aa24.87■■□□□ 1.57
FGFR1-206ENST00000397091 PLPPR3Q6T4P5 718 aa24.86■■□□□ 1.57
FGFR1-206ENST00000397091 ZNF777Q9ULD5 760 aaPredicted RBP24.83■■□□□ 1.57
FGFR1-206ENST00000397091 CDK11AQ9UQ88 783 aaPredicted RBP24.75■■□□□ 1.55
FGFR1-206ENST00000397091 ZNF316A6NFI3 1004 aaPredicted RBP24.75■■□□□ 1.55
FGFR1-206ENST00000397091 STAG3Q9UJ98 1225 aa24.72■■□□□ 1.55
FGFR1-206ENST00000397091 NEFMP07197 916 aa24.7■■□□□ 1.55
FGFR1-206ENST00000397091 ZBTB47Q9UFB7 747 aaPredicted RBP24.7■■□□□ 1.55
FGFR1-206ENST00000397091 CHGAP10645 457 aaKnown RBP24.59■■□□□ 1.53
FGFR1-206ENST00000397091 SCRIBQ14160 1630 aa24.52■■□□□ 1.52
FGFR1-206ENST00000397091 BCL11AQ9H165 835 aa24.49■■□□□ 1.51
FGFR1-206ENST00000397091 CANXP27824 592 aaKnown RBP24.47■■□□□ 1.51
FGFR1-206ENST00000397091 CSRNP3Q8WYN3 585 aa24.47■■□□□ 1.51
FGFR1-206ENST00000397091 ANP32CO43423 234 aa24.44■■□□□ 1.5
FGFR1-206ENST00000397091 CHMP7Q8WUX9 453 aaPredicted RBP24.36■■□□□ 1.49
FGFR1-206ENST00000397091 SCAF1Q9H7N4 1312 aaKnown RBP24.36■■□□□ 1.49
FGFR1-206ENST00000397091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.26■■□□□ 1.476e-7■■□□□ 13.1
FGFR1-206ENST00000397091 EIF5BO60841 1220 aaKnown RBP24.25■■□□□ 1.47
FGFR1-206ENST00000397091 ANP32AP39687 249 aaKnown RBP24.22■■□□□ 1.47
FGFR1-206ENST00000397091 TSPY4P0CV99 314 aa24.12■■□□□ 1.45
FGFR1-206ENST00000397091 TSPY10P0CW01 314 aa24.12■■□□□ 1.45
FGFR1-206ENST00000397091 A0A0G2JS52 829 aa24.12■■□□□ 1.45
FGFR1-206ENST00000397091 FKBP8Q14318 412 aa24.09■■□□□ 1.45
FGFR1-206ENST00000397091 CHIC2Q9UKJ5 165 aa24.07■■□□□ 1.44
FGFR1-206ENST00000397091 GLIPR1L2Q4G1C9 344 aa24.06■■□□□ 1.44
FGFR1-206ENST00000397091 KCNH8Q96L42 1107 aa24.05■■□□□ 1.44
FGFR1-206ENST00000397091 ARID4BQ4LE39 1312 aaPredicted RBP24.05■■□□□ 1.44
FGFR1-206ENST00000397091 C14orf37Q86TY3 774 aa24.04■■□□□ 1.44
FGFR1-206ENST00000397091 PPP1R15AO75807 674 aaPredicted RBP24.02■■□□□ 1.44
FGFR1-206ENST00000397091 TONSLQ96HA7 1378 aa24.01■■□□□ 1.43
FGFR1-206ENST00000397091 PLEKHG5O94827 1062 aa23.97■■□□□ 1.43
FGFR1-206ENST00000397091 ZBTB7CA1YPR0 619 aa23.96■■□□□ 1.43
FGFR1-206ENST00000397091 NPM2Q86SE8 214 aaKnown RBP23.95■■□□□ 1.42
FGFR1-206ENST00000397091 DCAF1Q9Y4B6 1507 aa23.94■■□□□ 1.42
FGFR1-206ENST00000397091 SENP3Q9H4L4 574 aaPredicted RBP23.92■■□□□ 1.42
FGFR1-206ENST00000397091 RB1CC1Q8TDY2 1594 aa23.92■■□□□ 1.42
FGFR1-206ENST00000397091 MTUS2Q5JR59 1369 aa23.91■■□□□ 1.42
FGFR1-206ENST00000397091 HAP1P54257 671 aaPredicted RBP23.89■■□□□ 1.41
FGFR1-206ENST00000397091 ERCC6Q03468 1493 aa23.88■■□□□ 1.41
FGFR1-206ENST00000397091 KDM2AQ9Y2K7 1162 aa23.87■■□□□ 1.41
FGFR1-206ENST00000397091 PLEKHD1A6NEE1 506 aa23.86■■□□□ 1.41
FGFR1-206ENST00000397091 ANP32EQ9BTT0 268 aa23.85■■□□□ 1.41
FGFR1-206ENST00000397091 NBR1Q14596 966 aa23.84■■□□□ 1.41
FGFR1-206ENST00000397091 TRHP20396 242 aaPredicted RBP23.84■■□□□ 1.41
FGFR1-206ENST00000397091 ZCCHC6Q5VYS8 1495 aaKnown RBP23.78■■□□□ 1.4
FGFR1-206ENST00000397091 WDR43Q15061 677 aaKnown RBP eCLIP23.7■■□□□ 1.38
FGFR1-206ENST00000397091 SALL2Q9Y467 1007 aaPredicted RBP23.7■■□□□ 1.38
FGFR1-206ENST00000397091 CCDC180Q9P1Z9 1646 aa23.69■■□□□ 1.38
FGFR1-206ENST00000397091 ANP32BQ92688 251 aaKnown RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms