RNA–Protein interactions for RNA: ENST00000565406.5

NTHL1-206, Transcript of nth like DNA glycosylase 1, humanhuman

TSL 2

Gene NTHL1, Length 691 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTHL1-206ENST00000565406 NISCHQ9Y2I1 1504 aa49.42■■■■■ 5.5
NTHL1-206ENST00000565406 CCDC180Q9P1Z9 1646 aa44.06■■■■■ 4.64
NTHL1-206ENST00000565406 ABCC9O60706 1549 aa43.09■■■■■ 4.49
NTHL1-206ENST00000565406 RB1CC1Q8TDY2 1594 aa41.46■■■■■ 4.23
NTHL1-206ENST00000565406 NACADO15069 1562 aa41.38■■■■■ 4.22
NTHL1-206ENST00000565406 DCAF8L2P0C7V8 631 aa41.18■■■■■ 4.18
NTHL1-206ENST00000565406 ZCCHC6Q5VYS8 1495 aaKnown RBP41.15■■■■■ 4.18
NTHL1-206ENST00000565406 MYO15BQ96JP2 1530 aa41.12■■■■■ 4.17
NTHL1-206ENST00000565406 DCAF1Q9Y4B6 1507 aa40.91■■■■■ 4.14
NTHL1-206ENST00000565406 UNC13AQ9UPW8 1703 aa40.68■■■■■ 4.1
NTHL1-206ENST00000565406 BICRAQ9NZM4 1560 aa40.27■■■■■ 4.04
NTHL1-206ENST00000565406 PABPN1Q86U42 306 aaKnown RBP eCLIP40.2■■■■■ 4.03
NTHL1-206ENST00000565406 SCRIBQ14160 1630 aa40.12■■■■■ 4.01
NTHL1-206ENST00000565406 SHROOM4Q9ULL8 1493 aa39.76■■■■□ 3.96
NTHL1-206ENST00000565406 DNAJC5BQ9UF47 199 aa39.66■■■■□ 3.94
NTHL1-206ENST00000565406 EIF4G1Q04637 1599 aaKnown RBP39.16■■■■□ 3.86
NTHL1-206ENST00000565406 CC2D2AQ9P2K1 1620 aa39.04■■■■□ 3.84
NTHL1-206ENST00000565406 CECR2Q9BXF3 1484 aa38.73■■■■□ 3.79
NTHL1-206ENST00000565406 SMARCA4P51532 1647 aa38.4■■■■□ 3.74
NTHL1-206ENST00000565406 BAZ1AQ9NRL2 1556 aaPredicted RBP38.31■■■■□ 3.72
NTHL1-206ENST00000565406 NCAPD3P42695 1498 aa38.17■■■■□ 3.7
NTHL1-206ENST00000565406 ATAD2BQ9ULI0 1458 aa38.17■■■■□ 3.7
NTHL1-206ENST00000565406 SMARCA2P51531 1590 aa38.12■■■■□ 3.69
NTHL1-206ENST00000565406 MROH2BQ7Z745 1585 aa38.09■■■■□ 3.69
NTHL1-206ENST00000565406 PEG3Q9GZU2 1588 aa38.04■■■■□ 3.68
NTHL1-206ENST00000565406 HMGXB3Q12766 1538 aa38■■■■□ 3.67
NTHL1-206ENST00000565406 BAZ1BQ9UIG0 1483 aaKnown RBP37.83■■■■□ 3.65
NTHL1-206ENST00000565406 WIZO95785 1651 aa37.72■■■■□ 3.63
NTHL1-206ENST00000565406 RSF1Q96T23 1441 aaPredicted RBP37.59■■■■□ 3.61
NTHL1-206ENST00000565406 NESP48681 1621 aa37.29■■■■□ 3.56
NTHL1-206ENST00000565406 TOP2AP11388 1531 aaKnown RBP37.26■■■■□ 3.56
NTHL1-206ENST00000565406 LAMC3Q9Y6N6 1575 aa37.21■■■■□ 3.55
NTHL1-206ENST00000565406 ERCC6Q03468 1493 aa37.11■■■■□ 3.53
NTHL1-206ENST00000565406 CADPSQ9ULU8 1353 aa37.03■■■■□ 3.52
NTHL1-206ENST00000565406 KIF21AQ7Z4S6 1674 aa36.93■■■■□ 3.5
NTHL1-206ENST00000565406 PDS5BQ9NTI5 1447 aa36.89■■■■□ 3.5
NTHL1-206ENST00000565406 CCDC88BA6NC98 1476 aa36.82■■■■□ 3.48
NTHL1-206ENST00000565406 THOC2Q8NI27 1593 aaKnown RBP36.81■■■■□ 3.48
NTHL1-206ENST00000565406 CUX2O14529 1486 aa36.81■■■■□ 3.48
NTHL1-206ENST00000565406 CFTRP13569 1480 aa36.81■■■■□ 3.48
NTHL1-206ENST00000565406 PRDM2Q13029 1718 aa36.68■■■■□ 3.46
NTHL1-206ENST00000565406 FANCD2Q9BXW9 1451 aa36.61■■■■□ 3.45
NTHL1-206ENST00000565406 CEP164Q9UPV0 1460 aa36.56■■■■□ 3.44
NTHL1-206ENST00000565406 MRC2Q9UBG0 1479 aa36.55■■■■□ 3.44
NTHL1-206ENST00000565406 WDR62O43379 1518 aa36.47■■■■□ 3.43
NTHL1-206ENST00000565406 SUPT5HO00267 1087 aaKnown RBP36.46■■■■□ 3.43
NTHL1-206ENST00000565406 URB2Q14146 1524 aaKnown RBP36.28■■■■□ 3.4
NTHL1-206ENST00000565406 TOPBP1Q92547 1522 aa36.03■■■■□ 3.36
NTHL1-206ENST00000565406 ABCC8Q09428 1581 aa36.01■■■■□ 3.35
NTHL1-206ENST00000565406 DNMBPQ6XZF7 1577 aa36■■■■□ 3.35
NTHL1-206ENST00000565406 IFT140Q96RY7 1462 aa35.8■■■■□ 3.32
NTHL1-206ENST00000565406 DNAJC5Q9H3Z4 198 aa35.78■■■■□ 3.32
NTHL1-206ENST00000565406 CUX1P39880 1505 aa35.74■■■■□ 3.31
NTHL1-206ENST00000565406 POLA1P09884 1462 aaPredicted RBP35.72■■■■□ 3.31
NTHL1-206ENST00000565406 TARBP1Q13395 1621 aaKnown RBP35.71■■■■□ 3.31
NTHL1-206ENST00000565406 ZNF608Q9ULD9 1512 aaPredicted RBP35.67■■■■□ 3.3
NTHL1-206ENST00000565406 FGD5Q6ZNL6 1462 aa35.61■■■■□ 3.29
NTHL1-206ENST00000565406 EIF4G3O43432 1585 aaKnown RBP35.57■■■■□ 3.28
NTHL1-206ENST00000565406 RAD54L2Q9Y4B4 1467 aa35.55■■■■□ 3.28
NTHL1-206ENST00000565406 SOGA1O94964 1423 aa35.53■■■■□ 3.28
NTHL1-206ENST00000565406 BIVM-ERCC5R4GMW8 1640 aa35.46■■■■□ 3.27
NTHL1-206ENST00000565406 AQRO60306 1485 aaKnown RBP eCLIP35.44■■■■□ 3.26
NTHL1-206ENST00000565406 WDR97A6NE52 1622 aa35.43■■■■□ 3.26
NTHL1-206ENST00000565406 TOP2BQ02880 1626 aa35.43■■■■□ 3.26
NTHL1-206ENST00000565406 WRNQ14191 1432 aaPredicted RBP eCLIP35.41■■■■□ 3.26
NTHL1-206ENST00000565406 SYNJ1O43426 1573 aa35.41■■■■□ 3.26
NTHL1-206ENST00000565406 TDRD9Q8NDG6 1382 aaKnown RBP35.34■■■■□ 3.25
NTHL1-206ENST00000565406 ABCA10Q8WWZ4 1543 aa35.27■■■■□ 3.24
NTHL1-206ENST00000565406 OSCARQ8IYS5 282 aa35.21■■■■□ 3.23
NTHL1-206ENST00000565406 CHD1O14646 1710 aa35.2■■■■□ 3.23
NTHL1-206ENST00000565406 ABCA5Q8WWZ7 1642 aa35.19■■■■□ 3.22
NTHL1-206ENST00000565406 PBRM1Q86U86 1689 aa35.18■■■■□ 3.22
NTHL1-206ENST00000565406 GRIN2BQ13224 1484 aa35.14■■■■□ 3.22
NTHL1-206ENST00000565406 GAPVD1Q14C86 1478 aa35.14■■■■□ 3.22
NTHL1-206ENST00000565406 SNAPC4Q5SXM2 1469 aa35.11■■■■□ 3.21
NTHL1-206ENST00000565406 MAGI1Q96QZ7 1491 aaPredicted RBP35.07■■■■□ 3.2
NTHL1-206ENST00000565406 FBLN2P98095 1184 aa34.94■■■■□ 3.18
NTHL1-206ENST00000565406 SYNJ2O15056 1496 aa34.93■■■■□ 3.18
NTHL1-206ENST00000565406 CHMP7Q8WUX9 453 aaPredicted RBP34.86■■■■□ 3.17
NTHL1-206ENST00000565406 ERICH3Q5RHP9 1530 aa34.86■■■■□ 3.17
NTHL1-206ENST00000565406 ADAMTS12P58397 1594 aa34.83■■■■□ 3.17
NTHL1-206ENST00000565406 RIMBP3CA6NJZ7 1639 aa34.77■■■■□ 3.16
NTHL1-206ENST00000565406 RIMBP3BA6NNM3 1639 aa34.77■■■■□ 3.16
NTHL1-206ENST00000565406 RIMBP3Q9UFD9 1639 aa34.77■■■■□ 3.16
NTHL1-206ENST00000565406 CLASP1Q7Z460 1538 aa34.76■■■■□ 3.16
NTHL1-206ENST00000565406 FHAD1B1AJZ9 1412 aa34.72■■■■□ 3.15
NTHL1-206ENST00000565406 ARHGEF11O15085 1522 aa34.71■■■■□ 3.15
NTHL1-206ENST00000565406 GRIN2AQ12879 1464 aa34.71■■■■□ 3.15
NTHL1-206ENST00000565406 KIF27Q86VH2 1401 aa34.67■■■■□ 3.14
NTHL1-206ENST00000565406 CEP170Q5SW79 1584 aa34.57■■■■□ 3.13
NTHL1-206ENST00000565406 IGF1RP08069 1367 aa34.57■■■■□ 3.12
NTHL1-206ENST00000565406 NUP160Q12769 1436 aa34.56■■■■□ 3.12
NTHL1-206ENST00000565406 CUL7Q14999 1698 aa34.54■■■■□ 3.12
NTHL1-206ENST00000565406 TRIM41Q8WV44 630 aa34.5■■■■□ 3.11
NTHL1-206ENST00000565406 ARAP1Q96P48 1450 aa34.42■■■■□ 3.1
NTHL1-206ENST00000565406 RUSC2Q8N2Y8 1516 aa34.39■■■■□ 3.1
NTHL1-206ENST00000565406 SHROOM2Q13796 1616 aa34.38■■■■□ 3.09
NTHL1-206ENST00000565406 CARMIL1Q5VZK9 1371 aa34.34■■■■□ 3.09
NTHL1-206ENST00000565406 CYB5RLQ6IPT4 315 aa34.31■■■■□ 3.08
NTHL1-206ENST00000565406 ERCC6L2Q5T890 1561 aa34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms