RNA–Protein interactions for RNA: ENST00000397103.5

FGFR1-207, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 2,953 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-207ENST00000397103 NISCHQ9Y2I1 1504 aa23.34■■□□□ 1.33
FGFR1-207ENST00000397103 HRCP23327 699 aa21.83■■□□□ 1.08
FGFR1-207ENST00000397103 PELP1Q8IZL8 1130 aaKnown RBP21.77■■□□□ 1.08
FGFR1-207ENST00000397103 MYT1Q01538 1121 aa21.11■□□□□ 0.97
FGFR1-207ENST00000397103 PPARGC1BQ86YN6 1023 aaKnown RBP21.07■□□□□ 0.96
FGFR1-207ENST00000397103 PCGF6Q9BYE7 350 aa20.95■□□□□ 0.94
FGFR1-207ENST00000397103 MYO15BQ96JP2 1530 aa20.91■□□□□ 0.94
FGFR1-207ENST00000397103 DCAF1Q9Y4B6 1507 aa20.76■□□□□ 0.91
FGFR1-207ENST00000397103 SCAF1Q9H7N4 1312 aaKnown RBP20.76■□□□□ 0.91
FGFR1-207ENST00000397103 CHIC1Q5VXU3 224 aa20.62■□□□□ 0.89
FGFR1-207ENST00000397103 CCDC180Q9P1Z9 1646 aa20.61■□□□□ 0.89
FGFR1-207ENST00000397103 SUPT5HO00267 1087 aaKnown RBP20.53■□□□□ 0.88
FGFR1-207ENST00000397103 ZEB1P37275 1124 aaPredicted RBP20.48■□□□□ 0.87
FGFR1-207ENST00000397103 SHROOM4Q9ULL8 1493 aa20.45■□□□□ 0.86
FGFR1-207ENST00000397103 TRIM26Q12899 539 aaPredicted RBP20.41■□□□□ 0.86
FGFR1-207ENST00000397103 ACIN1Q9UKV3 1341 aaKnown RBP20.2■□□□□ 0.82
FGFR1-207ENST00000397103 NEUROD1Q13562 356 aa20.03■□□□□ 0.8
FGFR1-207ENST00000397103 TTBK1Q5TCY1 1321 aaPredicted RBP20■□□□□ 0.79
FGFR1-207ENST00000397103 LOC105371045A0A1W2PR82 267 aa19.98■□□□□ 0.79
FGFR1-207ENST00000397103 ZCCHC6Q5VYS8 1495 aaKnown RBP19.97■□□□□ 0.79
FGFR1-207ENST00000397103 GTF3C3Q9Y5Q9 886 aa19.93■□□□□ 0.78
FGFR1-207ENST00000397103 CENPBP07199 599 aaPredicted RBP19.86■□□□□ 0.77
FGFR1-207ENST00000397103 DIEXFQ68CQ4 756 aaKnown RBP19.58■□□□□ 0.73
FGFR1-207ENST00000397103 TRIM41Q8WV44 630 aa19.41■□□□□ 0.7
FGFR1-207ENST00000397103 BCL11AQ9H165 835 aa19.41■□□□□ 0.7
FGFR1-207ENST00000397103 CCER1Q8TC90 406 aaPredicted RBP19.29■□□□□ 0.68
FGFR1-207ENST00000397103 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.27■□□□□ 0.68
FGFR1-207ENST00000397103 ANP32EQ9BTT0 268 aa19.27■□□□□ 0.68
FGFR1-207ENST00000397103 FAM9AQ8IZU1 332 aaPredicted RBP19.24■□□□□ 0.67
FGFR1-207ENST00000397103 CLSPNQ9HAW4 1339 aa19.21■□□□□ 0.67
FGFR1-207ENST00000397103 ZNF316A6NFI3 1004 aaPredicted RBP19.19■□□□□ 0.66
FGFR1-207ENST00000397103 ABCC9O60706 1549 aa19.07■□□□□ 0.64
FGFR1-207ENST00000397103 YTHDC1Q96MU7 727 aaKnown RBP19.04■□□□□ 0.64
FGFR1-207ENST00000397103 MIER1Q8N108 512 aa19.02■□□□□ 0.63
FGFR1-207ENST00000397103 TSHZ2Q9NRE2 1034 aa19■□□□□ 0.63
FGFR1-207ENST00000397103 SUPT16HQ9Y5B9 1047 aaKnown RBP18.97■□□□□ 0.63
FGFR1-207ENST00000397103 CSRNP3Q8WYN3 585 aa18.96■□□□□ 0.63
FGFR1-207ENST00000397103 WRNQ14191 1432 aaPredicted RBP eCLIP18.92■□□□□ 0.62
FGFR1-207ENST00000397103 PRKCSHP14314 528 aaPredicted RBP18.9■□□□□ 0.62
FGFR1-207ENST00000397103 RB1CC1Q8TDY2 1594 aa18.87■□□□□ 0.61
FGFR1-207ENST00000397103 RSF1Q96T23 1441 aaPredicted RBP18.85■□□□□ 0.61
FGFR1-207ENST00000397103 DCAF8L2P0C7V8 631 aa18.74■□□□□ 0.59
FGFR1-207ENST00000397103 ERICH6Q7L0X2 663 aa18.66■□□□□ 0.58
FGFR1-207ENST00000397103 EHMT2Q96KQ7 1210 aa18.62■□□□□ 0.57
FGFR1-207ENST00000397103 CEP162Q5TB80 1403 aa18.53■□□□□ 0.56
FGFR1-207ENST00000397103 RBM19Q9Y4C8 960 aaKnown RBP18.5■□□□□ 0.55
FGFR1-207ENST00000397103 EIF4G1Q04637 1599 aaKnown RBP18.49■□□□□ 0.55
FGFR1-207ENST00000397103 APLP2Q06481 763 aa18.48■□□□□ 0.55
FGFR1-207ENST00000397103 TNIKQ9UKE5 1360 aa18.47■□□□□ 0.55
FGFR1-207ENST00000397103 MYT1LQ9UL68 1186 aa18.42■□□□□ 0.54
FGFR1-207ENST00000397103 MSH5O43196 834 aa18.38■□□□□ 0.53
FGFR1-207ENST00000397103 FANCIQ9NVI1 1328 aa18.35■□□□□ 0.53
FGFR1-207ENST00000397103 FKBP8Q14318 412 aa18.28■□□□□ 0.52
FGFR1-207ENST00000397103 EEA1Q15075 1411 aa18.26■□□□□ 0.51
FGFR1-207ENST00000397103 SCRIBQ14160 1630 aa18.25■□□□□ 0.51
FGFR1-207ENST00000397103 BCANQ96GW7 911 aa18.23■□□□□ 0.51
FGFR1-207ENST00000397103 HNRNPUL2Q1KMD3 747 aaKnown RBP18.22■□□□□ 0.51
FGFR1-207ENST00000397103 DHX57Q6P158 1386 aaKnown RBP18.2■□□□□ 0.5
FGFR1-207ENST00000397103 BAZ1AQ9NRL2 1556 aaPredicted RBP18.18■□□□□ 0.5
FGFR1-207ENST00000397103 CCDC88BA6NC98 1476 aa18.18■□□□□ 0.5
FGFR1-207ENST00000397103 ABCC8Q09428 1581 aa18.18■□□□□ 0.5
FGFR1-207ENST00000397103 MROH2BQ7Z745 1585 aa18.17■□□□□ 0.5
FGFR1-207ENST00000397103 WIZO95785 1651 aa18.16■□□□□ 0.5
FGFR1-207ENST00000397103 GOLGA3Q08378 1498 aa18.15■□□□□ 0.5
FGFR1-207ENST00000397103 ERICH6BQ5W0A0 696 aa18.14■□□□□ 0.49
FGFR1-207ENST00000397103 NEFLP07196 543 aa18.14■□□□□ 0.49
FGFR1-207ENST00000397103 NACADO15069 1562 aa18.13■□□□□ 0.49
FGFR1-207ENST00000397103 DEKP35659 375 aaKnown RBP18.13■□□□□ 0.49
FGFR1-207ENST00000397103 KCNH8Q96L42 1107 aa18.11■□□□□ 0.49
FGFR1-207ENST00000397103 SOGA1O94964 1423 aa18.1■□□□□ 0.49
FGFR1-207ENST00000397103 ANO8Q9HCE9 1232 aaPredicted RBP18.09■□□□□ 0.49
FGFR1-207ENST00000397103 CECR2Q9BXF3 1484 aa18.09■□□□□ 0.49
FGFR1-207ENST00000397103 VPS8Q8N3P4 1428 aa18.05■□□□□ 0.48
FGFR1-207ENST00000397103 KIF21BO75037 1637 aa18.02■□□□□ 0.47
FGFR1-207ENST00000397103 CUX2O14529 1486 aa18.01■□□□□ 0.47
FGFR1-207ENST00000397103 CLIP1P30622 1438 aa18.01■□□□□ 0.47
FGFR1-207ENST00000397103 ITGAEP38570 1179 aa18.01■□□□□ 0.47
FGFR1-207ENST00000397103 UBTFP17480 764 aaKnown RBP18■□□□□ 0.47
FGFR1-207ENST00000397103 CCER2I3L3R5 266 aa17.97■□□□□ 0.47
FGFR1-207ENST00000397103 CDK11AQ9UQ88 783 aaPredicted RBP17.97■□□□□ 0.47
FGFR1-207ENST00000397103 RUSC2Q8N2Y8 1516 aa17.97■□□□□ 0.47
FGFR1-207ENST00000397103 CEP164Q9UPV0 1460 aa17.94■□□□□ 0.46
FGFR1-207ENST00000397103 UBE2Q2Q8WVN8 375 aa17.93■□□□□ 0.46
FGFR1-207ENST00000397103 BAZ1BQ9UIG0 1483 aaKnown RBP17.9■□□□□ 0.46
FGFR1-207ENST00000397103 SALL2Q9Y467 1007 aaPredicted RBP17.9■□□□□ 0.46
FGFR1-207ENST00000397103 TOP2AP11388 1531 aaKnown RBP17.89■□□□□ 0.45
FGFR1-207ENST00000397103 PPP1R15AO75807 674 aaPredicted RBP17.87■□□□□ 0.45
FGFR1-207ENST00000397103 RRBP1Q9P2E9 1410 aaKnown RBP17.85■□□□□ 0.45
FGFR1-207ENST00000397103 SMARCA2P51531 1590 aa17.84■□□□□ 0.45
FGFR1-207ENST00000397103 NOP58Q9Y2X3 529 aaKnown RBP17.8■□□□□ 0.44
FGFR1-207ENST00000397103 MAPKBP1O60336 1514 aa17.8■□□□□ 0.44
FGFR1-207ENST00000397103 UNC13AQ9UPW8 1703 aa17.78■□□□□ 0.44
FGFR1-207ENST00000397103 TRIM52Q96A61 297 aa17.78■□□□□ 0.44
FGFR1-207ENST00000397103 DDX10Q13206 875 aaKnown RBP17.77■□□□□ 0.44
FGFR1-207ENST00000397103 WDR97A6NE52 1622 aa17.74■□□□□ 0.43
FGFR1-207ENST00000397103 PPP4R2Q9NY27 417 aa17.74■□□□□ 0.43
FGFR1-207ENST00000397103 ANP32CO43423 234 aa17.71■□□□□ 0.43
FGFR1-207ENST00000397103 TIMELESSQ9UNS1 1208 aa17.68■□□□□ 0.42
FGFR1-207ENST00000397103 PAK3O75914 559 aaPredicted RBP17.67■□□□□ 0.42
FGFR1-207ENST00000397103 NBR1Q14596 966 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms